| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yaiV [H]
Identifier: 157371933
GI number: 157371933
Start: 4088622
End: 4089302
Strand: Direct
Name: yaiV [H]
Synonym: Spro_3698
Alternate gene names: 157371933
Gene position: 4088622-4089302 (Clockwise)
Preceding gene: 157371932
Following gene: 157371934
Centisome position: 75.04
GC content: 53.01
Gene sequence:
>681_bases GTGACAGACAAGCCGCATGCAGCCGGGAGTGCTCCAGGCAACGACCACTTCAACGATGCGCTGCAAAAAATCATTCCGCA TAAGCCAAGCGACATCATTGCTCGTCTGATGGCGGAGCTGAAACCCGAGGCCGTCGAAGTGACCGCCAGACGCTCACGCC AGTTCAGCGGTAAAAATCCTCAGGTATTCCTGCTATTGCAGGGTGCGGTCAACCTGCATCGTCAGTCGGACGATCTGCTG ATGACCACCATCTACGCGCCGCATATCATCGGCCTGGCGGAACTGCTGCACCCGGTGGGACAAACCTATCTGCATCTGGA AAAAGACTGTGAGATCCATGTGGTGGCAGGCAGCAAGGTGCTGCAAAAGCTCGACCAGCACCCCATGTTATGGGCCGACG TTTCTCGCATTTTGGCTTATCAACTGCATTTCGCCAGCCTGCGTGACCTGCACTTGTTGAATAACCATGCTTATGACGCC ATCCGCGGTAAGCTATTGGAATTGATCAATGCGCCAGAAAGCACAAGGCTCGACTATTCGGCATTGAGGTATATTCAGGA ACGCACCACACTGGCGCGCAGCACCATATTAAAATGTTTGAGTGACTTGAAGACCGGCGGTTATATCGCCATGGAGAAAG GCCACCTGACTCAGGTGTTTAATTTGCCTCAGCGTTATTAA
Upstream 100 bases:
>100_bases AAAGAACGTTTAATTCCCCGAATTAAGCAGCCTCCCCTATACTCAGCCGGTACAACACGCATAAACTACAACCTAACGTG CTGATTAACGGGGAATCAAG
Downstream 100 bases:
>100_bases AAAAGGCCGCTGGGGATGCCAGCGGCAACGGACACTACTGATATTGTCTTTCTTGCTTTCTTATTGCTTACACACAGTGG CAATAATAGAGTAATAAAAT
Product: CRP/FNR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MTDKPHAAGSAPGNDHFNDALQKIIPHKPSDIIARLMAELKPEAVEVTARRSRQFSGKNPQVFLLLQGAVNLHRQSDDLL MTTIYAPHIIGLAELLHPVGQTYLHLEKDCEIHVVAGSKVLQKLDQHPMLWADVSRILAYQLHFASLRDLHLLNNHAYDA IRGKLLELINAPESTRLDYSALRYIQERTTLARSTILKCLSDLKTGGYIAMEKGHLTQVFNLPQRY
Sequences:
>Translated_226_residues MTDKPHAAGSAPGNDHFNDALQKIIPHKPSDIIARLMAELKPEAVEVTARRSRQFSGKNPQVFLLLQGAVNLHRQSDDLL MTTIYAPHIIGLAELLHPVGQTYLHLEKDCEIHVVAGSKVLQKLDQHPMLWADVSRILAYQLHFASLRDLHLLNNHAYDA IRGKLLELINAPESTRLDYSALRYIQERTTLARSTILKCLSDLKTGGYIAMEKGHLTQVFNLPQRY >Mature_225_residues TDKPHAAGSAPGNDHFNDALQKIIPHKPSDIIARLMAELKPEAVEVTARRSRQFSGKNPQVFLLLQGAVNLHRQSDDLLM TTIYAPHIIGLAELLHPVGQTYLHLEKDCEIHVVAGSKVLQKLDQHPMLWADVSRILAYQLHFASLRDLHLLNNHAYDAI RGKLLELINAPESTRLDYSALRYIQERTTLARSTILKCLSDLKTGGYIAMEKGHLTQVFNLPQRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510929, Length=169, Percent_Identity=33.1360946745562, Blast_Score=99, Evalue=2e-22,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011991 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25466; Mature: 25335
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDKPHAAGSAPGNDHFNDALQKIIPHKPSDIIARLMAELKPEAVEVTARRSRQFSGKNP CCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC QVFLLLQGAVNLHRQSDDLLMTTIYAPHIIGLAELLHPVGQTYLHLEKDCEIHVVAGSKV EEEEEEECCHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECHHH LQKLDQHPMLWADVSRILAYQLHFASLRDLHLLNNHAYDAIRGKLLELINAPESTRLDYS HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH ALRYIQERTTLARSTILKCLSDLKTGGYIAMEKGHLTQVFNLPQRY HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCC >Mature Secondary Structure TDKPHAAGSAPGNDHFNDALQKIIPHKPSDIIARLMAELKPEAVEVTARRSRQFSGKNP CCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC QVFLLLQGAVNLHRQSDDLLMTTIYAPHIIGLAELLHPVGQTYLHLEKDCEIHVVAGSKV EEEEEEECCHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECHHH LQKLDQHPMLWADVSRILAYQLHFASLRDLHLLNNHAYDAIRGKLLELINAPESTRLDYS HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH ALRYIQERTTLARSTILKCLSDLKTGGYIAMEKGHLTQVFNLPQRY HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]