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The map label for this gene is ytfH [H]

Identifier: 157371827

GI number: 157371827

Start: 3968562

End: 3968936

Strand: Direct

Name: ytfH [H]

Synonym: Spro_3592

Alternate gene names: 157371827

Gene position: 3968562-3968936 (Clockwise)

Preceding gene: 157371825

Following gene: 157371832

Centisome position: 72.83

GC content: 54.4

Gene sequence:

>375_bases
ATGAACGAGACAGATCCTATCTACCGGGCCGACTGCCCCAGCCGAATCATTCTCGACCAGATCGCAGATAAATGGTCGAT
GATGGTGCTGGAAGTGCTTCGCGAGCCACGGCGTTTCAACGCGATTAAGCGCCGCCTTGACGGCGTCACTCAGCGCGTAC
TGACTCAGACACTGCGTAAACTTGAGCGCAACGGCATGGTGAAACGCCGGGTTCTGGATGGGCGGATACTGGGCGTCGAG
TATTCACTGACCCCACTCGGCCACTCGTTACAGGAGCCGTTTGCAATCCTGTTCAATTGGACGCTGGGGAATATGGAGAC
GATTCAGGACTGCCAGAGAAAATATGATGAGCAAAGCCAACAGGATGGAAATTGA

Upstream 100 bases:

>100_bases
AAGTGGCAGCGGGTTTGGGTGCTGTTCACCCCATGGTATACTTTGCATACCTAGGGTCAATTACGCACTTTAAACATCCC
AGGGATGCTGGAGGATACCT

Downstream 100 bases:

>100_bases
GGTTGGCAGCCTCAATTCCCTGTGCGATTAATGGCCGCGTACATCCAATAATCTCTGGCCTGCCCGCGCACGCGGCGGTA
TTGCCTGATTAAACCTTCGC

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MNETDPIYRADCPSRIILDQIADKWSMMVLEVLREPRRFNAIKRRLDGVTQRVLTQTLRKLERNGMVKRRVLDGRILGVE
YSLTPLGHSLQEPFAILFNWTLGNMETIQDCQRKYDEQSQQDGN

Sequences:

>Translated_124_residues
MNETDPIYRADCPSRIILDQIADKWSMMVLEVLREPRRFNAIKRRLDGVTQRVLTQTLRKLERNGMVKRRVLDGRILGVE
YSLTPLGHSLQEPFAILFNWTLGNMETIQDCQRKYDEQSQQDGN
>Mature_124_residues
MNETDPIYRADCPSRIILDQIADKWSMMVLEVLREPRRFNAIKRRLDGVTQRVLTQTLRKLERNGMVKRRVLDGRILGVE
YSLTPLGHSLQEPFAILFNWTLGNMETIQDCQRKYDEQSQQDGN

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=103, Percent_Identity=34.9514563106796, Blast_Score=76, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 14551; Mature: 14551

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNETDPIYRADCPSRIILDQIADKWSMMVLEVLREPRRFNAIKRRLDGVTQRVLTQTLRK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LERNGMVKRRVLDGRILGVEYSLTPLGHSLQEPFAILFNWTLGNMETIQDCQRKYDEQSQ
HHHCCHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
QDGN
CCCC
>Mature Secondary Structure
MNETDPIYRADCPSRIILDQIADKWSMMVLEVLREPRRFNAIKRRLDGVTQRVLTQTLRK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LERNGMVKRRVLDGRILGVEYSLTPLGHSLQEPFAILFNWTLGNMETIQDCQRKYDEQSQ
HHHCCHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
QDGN
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]