| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is torS [H]
Identifier: 157371825
GI number: 157371825
Start: 3965741
End: 3967525
Strand: Direct
Name: torS [H]
Synonym: Spro_3590
Alternate gene names: 157371825
Gene position: 3965741-3967525 (Clockwise)
Preceding gene: 157371824
Following gene: 157371827
Centisome position: 72.78
GC content: 49.52
Gene sequence:
>1785_bases ATGAAGTTACTTCAATCTTTACAAGATGATGGTATTTCTCCCCGTGCGCAAATCCGTCTGCTGGACAATACATTTATACG CCTGGTATTTAGCTTCAGCGCAGTGCCCTTTGTTGGTATTCCTTTCGCTATTTGGATTTATTTACTGGGTGAAAACCTAT GGCCGATTACCCTCTGGATAGTTTTATATTTGTTCTGCGCCGTCGCCATCAGGTTATGGCATCGCAGCTATAAGAGAGAA ACAATAAAAAAAGATGCGGACTTTATTCTTCGCCGCTGGCTACCCCATATCAATAAAGTTGCCTTCGTTCATGGGCTGGG TATTTCTTCGTTATATATAATCACGCCACAAATAAACAATTTTGACTTTTTCTTATTATTGAACATCAGTATCGCGGCTA TCGTTGCGGCCAACGCAACACATTTAACGCCAGTCATTAGCGCCTTTACACTGTTTTTCTTTTCCTGCTGGAGCATACTG AATATTGGCATCATCTGGCGATTAAACGATGTCATGCTTATTGTGCTGATGCTTAACCTGCTTTATGGGTTCGCCATCTA CCGCCACGCATTAAGCTCCCATAAATTCTTTATCCAGCAAGCCCGTCTCGAAGAGGAAAGCTCCCGTCTTGCGGAGCAAT TCAGGCAGGCCAAAGAGGAAGCAGAGCAGGCGTTATTGGATAAAAACCAATTTCTTACTACCGCCAGTCATGATTTGCGT CAACCGGTGCACGCCATGGGTTTTTTGATCGAAGCCATTATCCATAAAAACCGCGATGTCACGCTCATCCCTCAGCTATT GGATCTGCAGCAAAGCGTAAGATCCGTGCATCTTATGTTTAATTCCTTACTCGATCTCAGCAAGATTGAATCCGGCAACG TCAGCACGGCAACGACCCATGTGGACATTGGAATACTGCTCGACTCGGTGATGACCCTGTTTCGCGAAGAGGCGAACAGC CGGGCATTATCATTACGGGCATGGCGGCCCAAGCGCCGAATTTATGTGATGGGCGATCAGCTACTCATCAGGCAATCACT GATTAACCTGATACAAAATGCACTGCGTTATACGCAAAAAGGAGGCGTGCTGATAGCCATTCGCCCTCAGGGAGCGGAAT GCTTAATTGAAGTTTGGGACACCGGCGTTGGCATCGCCGACGAAGAGAAAGGCAAAGTTTTTTCCCCCTATTATCGCCCT GAGCTGGCGTGGAAAATCGATAGTGCCGGCCACGGATTAGGGCTGGCGGTAGTGGCACGCTGCGCCAAACTGATGAAGGT GAAATACGGCATGCAATCCGTTGAAGGCAAGGGTTCCCGTTTCTGGATGCGCTTTGCCCTTTACAACGGCGAATGCGAGC TACCAGAAAGCGCAAACAGTTACTCAAATAGCCTCACTCCCCTCCGCTATGCGCCGCTGTACGGTTCCTGTCTGGTGGTG GACGATGACCCACTGGTGACTTCCGCCTGGTCGAGTTTGATGAGCACCTGGGGCCTCACCGTACGCTGTGCGGCCTGTGC AGAGGAGGCATTTGCGATTATCGATGAAGGCTTCAGCCCTTTTGCCGTGCTGTGCGATCAACGGCTCCGCTCTGGCGAGA GCGGGTTCGATATATTGAAAGCGCTGTTTGAACGCCTGCCGAATACCAGCGGTGCCATGGTCAGCGGGGAATTTAACTCA CCCACTTTGCAAGAGGCCGAACAGGAAGGTTATCTGGTACTGCGAAAACCGCTGGAACCCGCGAAACTCTATGCATTGCT GTCGCAATGGGCAGCCTCCAGTTAG
Upstream 100 bases:
>100_bases CCACAGTTAAAGAGCACATCAGTAATATTCTGAAAAAGATAGGTGTGAATAGTCGGGTAGAGGCGATCACCCTGCTCCAC GGCAGATCGGGGCCATTACA
Downstream 100 bases:
>100_bases CCGGGAGGCTTTATACCGGTGAACCCATGCCGGAATTCCGTTTCCCCATGGGTCCGATTTCAGGAGTGGCATTCCTTTAG ATCTCAAGGCCGCGCAGCAG
Product: integral membrane sensor hybrid histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 594; Mature: 594
Protein sequence:
>594_residues MKLLQSLQDDGISPRAQIRLLDNTFIRLVFSFSAVPFVGIPFAIWIYLLGENLWPITLWIVLYLFCAVAIRLWHRSYKRE TIKKDADFILRRWLPHINKVAFVHGLGISSLYIITPQINNFDFFLLLNISIAAIVAANATHLTPVISAFTLFFFSCWSIL NIGIIWRLNDVMLIVLMLNLLYGFAIYRHALSSHKFFIQQARLEEESSRLAEQFRQAKEEAEQALLDKNQFLTTASHDLR QPVHAMGFLIEAIIHKNRDVTLIPQLLDLQQSVRSVHLMFNSLLDLSKIESGNVSTATTHVDIGILLDSVMTLFREEANS RALSLRAWRPKRRIYVMGDQLLIRQSLINLIQNALRYTQKGGVLIAIRPQGAECLIEVWDTGVGIADEEKGKVFSPYYRP ELAWKIDSAGHGLGLAVVARCAKLMKVKYGMQSVEGKGSRFWMRFALYNGECELPESANSYSNSLTPLRYAPLYGSCLVV DDDPLVTSAWSSLMSTWGLTVRCAACAEEAFAIIDEGFSPFAVLCDQRLRSGESGFDILKALFERLPNTSGAMVSGEFNS PTLQEAEQEGYLVLRKPLEPAKLYALLSQWAASS
Sequences:
>Translated_594_residues MKLLQSLQDDGISPRAQIRLLDNTFIRLVFSFSAVPFVGIPFAIWIYLLGENLWPITLWIVLYLFCAVAIRLWHRSYKRE TIKKDADFILRRWLPHINKVAFVHGLGISSLYIITPQINNFDFFLLLNISIAAIVAANATHLTPVISAFTLFFFSCWSIL NIGIIWRLNDVMLIVLMLNLLYGFAIYRHALSSHKFFIQQARLEEESSRLAEQFRQAKEEAEQALLDKNQFLTTASHDLR QPVHAMGFLIEAIIHKNRDVTLIPQLLDLQQSVRSVHLMFNSLLDLSKIESGNVSTATTHVDIGILLDSVMTLFREEANS RALSLRAWRPKRRIYVMGDQLLIRQSLINLIQNALRYTQKGGVLIAIRPQGAECLIEVWDTGVGIADEEKGKVFSPYYRP ELAWKIDSAGHGLGLAVVARCAKLMKVKYGMQSVEGKGSRFWMRFALYNGECELPESANSYSNSLTPLRYAPLYGSCLVV DDDPLVTSAWSSLMSTWGLTVRCAACAEEAFAIIDEGFSPFAVLCDQRLRSGESGFDILKALFERLPNTSGAMVSGEFNS PTLQEAEQEGYLVLRKPLEPAKLYALLSQWAASS >Mature_594_residues MKLLQSLQDDGISPRAQIRLLDNTFIRLVFSFSAVPFVGIPFAIWIYLLGENLWPITLWIVLYLFCAVAIRLWHRSYKRE TIKKDADFILRRWLPHINKVAFVHGLGISSLYIITPQINNFDFFLLLNISIAAIVAANATHLTPVISAFTLFFFSCWSIL NIGIIWRLNDVMLIVLMLNLLYGFAIYRHALSSHKFFIQQARLEEESSRLAEQFRQAKEEAEQALLDKNQFLTTASHDLR QPVHAMGFLIEAIIHKNRDVTLIPQLLDLQQSVRSVHLMFNSLLDLSKIESGNVSTATTHVDIGILLDSVMTLFREEANS RALSLRAWRPKRRIYVMGDQLLIRQSLINLIQNALRYTQKGGVLIAIRPQGAECLIEVWDTGVGIADEEKGKVFSPYYRP ELAWKIDSAGHGLGLAVVARCAKLMKVKYGMQSVEGKGSRFWMRFALYNGECELPESANSYSNSLTPLRYAPLYGSCLVV DDDPLVTSAWSSLMSTWGLTVRCAACAEEAFAIIDEGFSPFAVLCDQRLRSGESGFDILKALFERLPNTSGAMVSGEFNS PTLQEAEQEGYLVLRKPLEPAKLYALLSQWAASS
Specific function: Member of the two-component regulatory system torS/torR involved in the anaerobic utilization of trimethylamine-N-oxide (TMAO). Detects the presence of TMAO in the medium and, in response, activates torR via a four-step phosphorelay. When TMAO is removed,
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI87081816, Length=352, Percent_Identity=29.8295454545455, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI48994928, Length=330, Percent_Identity=28.7878787878788, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI145693157, Length=249, Percent_Identity=26.1044176706827, Blast_Score=99, Evalue=8e-22, Organism=Escherichia coli, GI1789149, Length=267, Percent_Identity=24.3445692883895, Blast_Score=96, Evalue=7e-21, Organism=Escherichia coli, GI1788393, Length=229, Percent_Identity=31.0043668122271, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1788713, Length=351, Percent_Identity=26.2108262108262, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1786600, Length=223, Percent_Identity=26.9058295964126, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1786783, Length=240, Percent_Identity=25.4166666666667, Blast_Score=74, Evalue=4e-14, Organism=Escherichia coli, GI1790551, Length=219, Percent_Identity=25.5707762557078, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1790436, Length=235, Percent_Identity=25.531914893617, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1790346, Length=206, Percent_Identity=27.6699029126214, Blast_Score=65, Evalue=2e-11, Organism=Escherichia coli, GI87082128, Length=242, Percent_Identity=23.5537190082645, Blast_Score=63, Evalue=6e-11, Organism=Escherichia coli, GI1786912, Length=223, Percent_Identity=27.8026905829596, Blast_Score=62, Evalue=7e-11, Organism=Escherichia coli, GI1787894, Length=254, Percent_Identity=22.4409448818898, Blast_Score=62, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR014302 - InterPro: IPR001789 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF01627 Hpt; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 67012; Mature: 67012
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN ; PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLQSLQDDGISPRAQIRLLDNTFIRLVFSFSAVPFVGIPFAIWIYLLGENLWPITLWI CCHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHH VLYLFCAVAIRLWHRSYKRETIKKDADFILRRWLPHINKVAFVHGLGISSLYIITPQINN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCC FDFFLLLNISIAAIVAANATHLTPVISAFTLFFFSCWSILNIGIIWRLNDVMLIVLMLNL CCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHEEEHHHHHHHHHHHHH LYGFAIYRHALSSHKFFIQQARLEEESSRLAEQFRQAKEEAEQALLDKNQFLTTASHDLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH QPVHAMGFLIEAIIHKNRDVTLIPQLLDLQQSVRSVHLMFNSLLDLSKIESGNVSTATTH HHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE VDIGILLDSVMTLFREEANSRALSLRAWRPKRRIYVMGDQLLIRQSLINLIQNALRYTQK EHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHC GGVLIAIRPQGAECLIEVWDTGVGIADEEKGKVFSPYYRPELAWKIDSAGHGLGLAVVAR CCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCEECCCCCCCEEEEECCCCCCHHHHHHHH CAKLMKVKYGMQSVEGKGSRFWMRFALYNGECELPESANSYSNSLTPLRYAPLYGSCLVV HHHHHHHHHCHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCEEEE DDDPLVTSAWSSLMSTWGLTVRCAACAEEAFAIIDEGFSPFAVLCDQRLRSGESGFDILK CCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHH ALFERLPNTSGAMVSGEFNSPTLQEAEQEGYLVLRKPLEPAKLYALLSQWAASS HHHHHCCCCCCCEEECCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MKLLQSLQDDGISPRAQIRLLDNTFIRLVFSFSAVPFVGIPFAIWIYLLGENLWPITLWI CCHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHH VLYLFCAVAIRLWHRSYKRETIKKDADFILRRWLPHINKVAFVHGLGISSLYIITPQINN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCC FDFFLLLNISIAAIVAANATHLTPVISAFTLFFFSCWSILNIGIIWRLNDVMLIVLMLNL CCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHEEEHHHHHHHHHHHHH LYGFAIYRHALSSHKFFIQQARLEEESSRLAEQFRQAKEEAEQALLDKNQFLTTASHDLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH QPVHAMGFLIEAIIHKNRDVTLIPQLLDLQQSVRSVHLMFNSLLDLSKIESGNVSTATTH HHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE VDIGILLDSVMTLFREEANSRALSLRAWRPKRRIYVMGDQLLIRQSLINLIQNALRYTQK EHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHC GGVLIAIRPQGAECLIEVWDTGVGIADEEKGKVFSPYYRPELAWKIDSAGHGLGLAVVAR CCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCEECCCCCCCEEEEECCCCCCHHHHHHHH CAKLMKVKYGMQSVEGKGSRFWMRFALYNGECELPESANSYSNSLTPLRYAPLYGSCLVV HHHHHHHHHCHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCEEEE DDDPLVTSAWSSLMSTWGLTVRCAACAEEAFAIIDEGFSPFAVLCDQRLRSGESGFDILK CCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHH ALFERLPNTSGAMVSGEFNSPTLQEAEQEGYLVLRKPLEPAKLYALLSQWAASS HHHHHCCCCCCCEEECCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]