Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

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The map label for this gene is yfaE [H]

Identifier: 157371510

GI number: 157371510

Start: 3616262

End: 3616522

Strand: Direct

Name: yfaE [H]

Synonym: Spro_3273

Alternate gene names: 157371510

Gene position: 3616262-3616522 (Clockwise)

Preceding gene: 157371509

Following gene: 157371513

Centisome position: 66.37

GC content: 54.02

Gene sequence:

>261_bases
ATGGCATCATCAATCGTCACGCTGCGTGCCAGTGGTACGCAGCTATCCTGCCCCAAAAGTGAAAACTGTCTGCTCGACGT
GCTGGAATTGCACGACGTTGAGGTGGAATACCAGTGCCGTTCCGGCTATTGCGGCGCCTGCCGCCTGAAGTTGGTGAAAG
GTGATGTGGTTTACCGACAGCCGCCATTGGCATTTATCAACGACGGTGAAATCCTGCCCTGCTGCTGTATGCCACTGACC
GATATCGAGCTGGAAATTTGA

Upstream 100 bases:

>100_bases
GCAGGTTGCACCGCAGGAAGTGGAAGTCAGCTCCTACCTGGTCGGCCAGATCGACTCGGAAGTGCATGCCGACGACCTGA
GCGACTTCGAACTCTAAGCG

Downstream 100 bases:

>100_bases
AGAGTTGGGTGCCTGAACCACGCCTGAAGACCAGAAGGCGGGGTTTCCCCCGCCCTATGATTACCGCTTCACATCACAAG
CTAACCTGATCAATATAGTG

Product: 2Fe-2S ferredoxin YfaE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 85

Protein sequence:

>86_residues
MASSIVTLRASGTQLSCPKSENCLLDVLELHDVEVEYQCRSGYCGACRLKLVKGDVVYRQPPLAFINDGEILPCCCMPLT
DIELEI

Sequences:

>Translated_86_residues
MASSIVTLRASGTQLSCPKSENCLLDVLELHDVEVEYQCRSGYCGACRLKLVKGDVVYRQPPLAFINDGEILPCCCMPLT
DIELEI
>Mature_85_residues
ASSIVTLRASGTQLSCPKSENCLLDVLELHDVEVEYQCRSGYCGACRLKLVKGDVVYRQPPLAFINDGEILPCCCMPLTD
IELEI

Specific function: Unknown

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1788568, Length=81, Percent_Identity=59.2592592592593, Blast_Score=97, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 9479; Mature: 9348

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
11.6 %Cys+Met (Translated Protein)
9.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
10.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASSIVTLRASGTQLSCPKSENCLLDVLELHDVEVEYQCRSGYCGACRLKLVKGDVVYRQ
CCCCEEEEEECCCEEECCCCCCCEEEEEECCCCEEEEEECCCCCCEEEEEEEECCEEEEC
PPLAFINDGEILPCCCMPLTDIELEI
CCEEEEECCCEEEEECCCCCEEEEEC
>Mature Secondary Structure 
ASSIVTLRASGTQLSCPKSENCLLDVLELHDVEVEYQCRSGYCGACRLKLVKGDVVYRQ
CCCEEEEEECCCEEECCCCCCCEEEEEECCCCEEEEEECCCCCCEEEEEEEECCEEEEC
PPLAFINDGEILPCCCMPLTDIELEI
CCEEEEECCCEEEEECCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]