| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is argT [H]
Identifier: 157371444
GI number: 157371444
Start: 3533029
End: 3533820
Strand: Direct
Name: argT [H]
Synonym: Spro_3207
Alternate gene names: 157371444
Gene position: 3533029-3533820 (Clockwise)
Preceding gene: 157371443
Following gene: 157371448
Centisome position: 64.84
GC content: 55.18
Gene sequence:
>792_bases ATGAAAACAAAAAGTAGCCTGGTTTTATTGCTGCCACTGGCATTCAGTTTCGCCGCCCTTGGCGGGGAGTTCAGCGGCAA GGTGATTAAGTTGGGCATAGACCCCACCTTCCCGCCGCTGGAATACAAAACTGCGCAAGGAACCCTGACCGGGTTCGGTG TGGATATCGCTCAGGCGCTGTGCAATGAGATGCAGGCCAGGTGCGTGTGGGTCGAAAGCAGTTGGGACGGGATGATCCCG GGGTTGCAGGCAAAAAAGTTTGACGCCATCGCCTCGTCAATGACCATTACGCCGCAGCGCGAAAAGCAGATCTCCTTCTC GAACAAGGTGTCTAACGCCCCGGCACGCCTGGTGGCCCGCAAGGGTAGCGACCTGCAGCCCACGGCGGCTTCACTGAAAG GCAAATCAATTGGCGTGCAACAAGGCTCCAGCCAGGAAGCTTACGCAAACGCAATGTGGCGCCAGGCCGGCGTCAACGTG ATTGCCTATCAGAGCCAACAGGAAGTGAATGAGGATCTGGCCAACGGCCGGTTGGACGCTTCGCTGCTGGCCAGCGTCAG CGCCAGCGAATTTTTCAAAACGCCCGGCGGCAAGGATTTTGCCTTTACCGGCGCGGAACTGAGCGACAGCAAATATTTTG GTATTGGCGATGGCATTGGCGTGCGTAAAGAGGACCGCGCATTACTTGATGCCTTCAACGCGGCGTTGAAAGCCATTATC GCCAACGGCACCTATAAGAAGGTGAACGATAAATACTTTGATTTTGATATGTACGGTAAGGGTAGTAACTGA
Upstream 100 bases:
>100_bases CGACGAGTGTTTGCCGATTGGCGCCACTTACTGGGTCAAGCTGGCGGAACGCTTCCTGACTTAATCCCTTTTTGAACACC ACTACGCTGAGGAAAACCAA
Downstream 100 bases:
>100_bases GGGGCAGATTAAAAGGGCCAGGCGAGCGCCTGGCCCGATAAAAACGGTTACTTCACTTCGCCCATAGCCTTCAGCTTTTT GGACAGTTCGCGACGTTCTT
Product: extracellular solute-binding protein
Products: ADP; phosphate; L-ornithine [Cytoplasm]; ADP; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]
Alternate protein names: LAO-binding protein [H]
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MKTKSSLVLLLPLAFSFAALGGEFSGKVIKLGIDPTFPPLEYKTAQGTLTGFGVDIAQALCNEMQARCVWVESSWDGMIP GLQAKKFDAIASSMTITPQREKQISFSNKVSNAPARLVARKGSDLQPTAASLKGKSIGVQQGSSQEAYANAMWRQAGVNV IAYQSQQEVNEDLANGRLDASLLASVSASEFFKTPGGKDFAFTGAELSDSKYFGIGDGIGVRKEDRALLDAFNAALKAII ANGTYKKVNDKYFDFDMYGKGSN
Sequences:
>Translated_263_residues MKTKSSLVLLLPLAFSFAALGGEFSGKVIKLGIDPTFPPLEYKTAQGTLTGFGVDIAQALCNEMQARCVWVESSWDGMIP GLQAKKFDAIASSMTITPQREKQISFSNKVSNAPARLVARKGSDLQPTAASLKGKSIGVQQGSSQEAYANAMWRQAGVNV IAYQSQQEVNEDLANGRLDASLLASVSASEFFKTPGGKDFAFTGAELSDSKYFGIGDGIGVRKEDRALLDAFNAALKAII ANGTYKKVNDKYFDFDMYGKGSN >Mature_263_residues MKTKSSLVLLLPLAFSFAALGGEFSGKVIKLGIDPTFPPLEYKTAQGTLTGFGVDIAQALCNEMQARCVWVESSWDGMIP GLQAKKFDAIASSMTITPQREKQISFSNKVSNAPARLVARKGSDLQPTAASLKGKSIGVQQGSSQEAYANAMWRQAGVNV IAYQSQQEVNEDLANGRLDASLLASVSASEFFKTPGGKDFAFTGAELSDSKYFGIGDGIGVRKEDRALLDAFNAALKAII ANGTYKKVNDKYFDFDMYGKGSN
Specific function: This periplasmic binding protein is involved in an arginine transport system. ArgT and histidine-binding protein J (hisJ) interact with a common membrane-bound receptor, hisP [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788649, Length=257, Percent_Identity=50.5836575875486, Blast_Score=260, Evalue=5e-71, Organism=Escherichia coli, GI1788648, Length=232, Percent_Identity=47.8448275862069, Blast_Score=244, Evalue=6e-66, Organism=Escherichia coli, GI1787085, Length=248, Percent_Identity=38.3064516129032, Blast_Score=172, Evalue=2e-44, Organism=Escherichia coli, GI1787088, Length=250, Percent_Identity=32.4, Blast_Score=149, Evalue=3e-37, Organism=Escherichia coli, GI1788228, Length=230, Percent_Identity=30.4347826086957, Blast_Score=107, Evalue=7e-25, Organism=Escherichia coli, GI1787031, Length=244, Percent_Identity=28.6885245901639, Blast_Score=87, Evalue=1e-18,
Paralogues:
None
Copy number: 900 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 28182; Mature: 28182
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKSSLVLLLPLAFSFAALGGEFSGKVIKLGIDPTFPPLEYKTAQGTLTGFGVDIAQAL CCCCCCEEEEHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEECCCCCEEECCHHHHHHH CNEMQARCVWVESSWDGMIPGLQAKKFDAIASSMTITPQREKQISFSNKVSNAPARLVAR HHHHCEEEEEEECCCCCCCCCCCHHHHHHHHHCEECCCCHHHHCCHHHHCCCCCHHHHCC KGSDLQPTAASLKGKSIGVQQGSSQEAYANAMWRQAGVNVIAYQSQQEVNEDLANGRLDA CCCCCCCHHHHCCCCEECCCCCCCHHHHHHHHHHHHCCEEEEECCHHHHHHHHHCCCCCH SLLASVSASEFFKTPGGKDFAFTGAELSDSKYFGIGDGIGVRKEDRALLDAFNAALKAII HHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHH ANGTYKKVNDKYFDFDMYGKGSN CCCCCEECCCEEEEEEECCCCCC >Mature Secondary Structure MKTKSSLVLLLPLAFSFAALGGEFSGKVIKLGIDPTFPPLEYKTAQGTLTGFGVDIAQAL CCCCCCEEEEHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEECCCCCEEECCHHHHHHH CNEMQARCVWVESSWDGMIPGLQAKKFDAIASSMTITPQREKQISFSNKVSNAPARLVAR HHHHCEEEEEEECCCCCCCCCCCHHHHHHHHHCEECCCCHHHHCCHHHHCCCCCHHHHCC KGSDLQPTAASLKGKSIGVQQGSSQEAYANAMWRQAGVNVIAYQSQQEVNEDLANGRLDA CCCCCCCHHHHCCCCEECCCCCCCHHHHHHHHHHHHCCEEEEECCHHHHHHHHHCCCCCH SLLASVSASEFFKTPGGKDFAFTGAELSDSKYFGIGDGIGVRKEDRALLDAFNAALKAII HHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHH ANGTYKKVNDKYFDFDMYGKGSN CCCCCEECCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-ornithine [Periplasm]; H2O; ATP; L-arginine [Periplasm]; L-lysine [Periplasm] [C]
Specific reaction: ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [Periplasm] + H2O = ADP + phosphate + L-lysine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 3040734; 9298646 [H]