| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157371435
Identifier: 157371435
GI number: 157371435
Start: 3522382
End: 3523068
Strand: Direct
Name: 157371435
Synonym: Spro_3198
Alternate gene names: NA
Gene position: 3522382-3523068 (Clockwise)
Preceding gene: 157371434
Following gene: 157371441
Centisome position: 64.64
GC content: 59.83
Gene sequence:
>687_bases ATGTCAGCTATCTATGATTGGTCGGTGTTGGCATTACGCCGTATTTACGATCGCCGCATCAGCGGTACGCCGGTGCTCGA CAGCGCCCAACTGTTCCCCGACGCACAGCGTTTTACCGCCCAGTGGCCGCAGCTCCGTGATGAGGCACTGACCCTGGCGC AAGATCTGCACAATATTCCGCGATTTCACGAAATCATGAGCGAACAGGCGTCGATCTCCGCCAATGATGCACGTGACTGG CGCATGTTCATCATGCAGGCCTACGGCCAGCCGATAACGCGCAACCTTGCACGCTGCCCCTTATTGGCCAGCCTGATCGC TTCCTCTCCGGATGTGCTTTCCGCCTCGCTGTCTTTCCTGGCCCCCGGTAAACAGGTGCCGGCGCACCGTGGCCCGTTCC GTGGCATTCTGCGCGGTTATCTGGTGCTGTCGATGCCCAAGGGTGCCGATGGTCTGCCCGCCGCCGTATTGAAAGTCGAC GGGCAGGAATACCGGCTCAATGAGGGGGAATTTATGCTGTGGGACGATACCTTCGAACACGAGGTGTGGAACGACAGCGA CCAGGTGCGCACCGTGTTGCTGCTGGATATCCGCCGCCGCGATTTACCCACCGGGCTGCGGATGTTGTCCAACGGCATTA TTGCCCTGGTGCGGTTGAACGTGCGCTGGATCCAGCGCCAGTTCTAG
Upstream 100 bases:
>100_bases AACGTTTATATAACGGTGAATTAATCGTCCGGCGGTCGCATATTAAACAATAATGATATCAACAGACGGCGAGAACTCGG GTCAGGCTTATTGAGGTCAT
Downstream 100 bases:
>100_bases GCCCCGCCCAGATAGGCTTTCCTCACTTCCTGATCGTTTAACAACTCCGAACCACTGCCGGTCAGGCGGATCTGGCCGTT AACCATCACATAGCCGCGAT
Product: aspartyl/asparaginyl beta-hydroxylase
Products: NA
Alternate protein names: Beta-Hydroxylase; Membrane-Bound Beta-Hydroxylase; Asparaginyl Beta-Hydroxylase; Peptide-Aspartate Beta-Dioxygenase; Aspartyl/Asparaginyl Beta-Hydroxylase Family Protein; Lipid A-Myristate Beta-Hydroxylase; Aspartyl-Asparaginyl Beta-Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Family; Lipopolysaccharide Biosynthetic; Hydroxylase; Peptide-Aspartate B-Dioxygenase; Aspartate Beta-Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Transmembrane Protein; Lipopolysaccharide Biosynthetic Protein; Beta-Hydroxylase Aspartyl/Asparaginyl Family; Fe(2+)/Alpha-Ketoglutarate-Dependent Dioxygenase LpxO; Peptide Aspartate B-Dioxygenase; Dioxygenase; Aspartyl/Asparaginyl-Beta-Hydroxylase
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MSAIYDWSVLALRRIYDRRISGTPVLDSAQLFPDAQRFTAQWPQLRDEALTLAQDLHNIPRFHEIMSEQASISANDARDW RMFIMQAYGQPITRNLARCPLLASLIASSPDVLSASLSFLAPGKQVPAHRGPFRGILRGYLVLSMPKGADGLPAAVLKVD GQEYRLNEGEFMLWDDTFEHEVWNDSDQVRTVLLLDIRRRDLPTGLRMLSNGIIALVRLNVRWIQRQF
Sequences:
>Translated_228_residues MSAIYDWSVLALRRIYDRRISGTPVLDSAQLFPDAQRFTAQWPQLRDEALTLAQDLHNIPRFHEIMSEQASISANDARDW RMFIMQAYGQPITRNLARCPLLASLIASSPDVLSASLSFLAPGKQVPAHRGPFRGILRGYLVLSMPKGADGLPAAVLKVD GQEYRLNEGEFMLWDDTFEHEVWNDSDQVRTVLLLDIRRRDLPTGLRMLSNGIIALVRLNVRWIQRQF >Mature_227_residues SAIYDWSVLALRRIYDRRISGTPVLDSAQLFPDAQRFTAQWPQLRDEALTLAQDLHNIPRFHEIMSEQASISANDARDWR MFIMQAYGQPITRNLARCPLLASLIASSPDVLSASLSFLAPGKQVPAHRGPFRGILRGYLVLSMPKGADGLPAAVLKVDG QEYRLNEGEFMLWDDTFEHEVWNDSDQVRTVLLLDIRRRDLPTGLRMLSNGIIALVRLNVRWIQRQF
Specific function: Unknown
COG id: COG3555
COG function: function code O; Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI24654024, Length=167, Percent_Identity=29.940119760479, Blast_Score=74, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25986; Mature: 25855
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIYDWSVLALRRIYDRRISGTPVLDSAQLFPDAQRFTAQWPQLRDEALTLAQDLHNIP CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHCHHHHHHHHHHHHHHHCCH RFHEIMSEQASISANDARDWRMFIMQAYGQPITRNLARCPLLASLIASSPDVLSASLSFL HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH APGKQVPAHRGPFRGILRGYLVLSMPKGADGLPAAVLKVDGQEYRLNEGEFMLWDDTFEH CCCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCEEEEEECCCEEEECCCCEEEECCCCCC EVWNDSDQVRTVLLLDIRRRDLPTGLRMLSNGIIALVRLNVRWIQRQF CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEHHHHHHHHCC >Mature Secondary Structure SAIYDWSVLALRRIYDRRISGTPVLDSAQLFPDAQRFTAQWPQLRDEALTLAQDLHNIP CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHCHHHHHHHHHHHHHHHCCH RFHEIMSEQASISANDARDWRMFIMQAYGQPITRNLARCPLLASLIASSPDVLSASLSFL HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH APGKQVPAHRGPFRGILRGYLVLSMPKGADGLPAAVLKVDGQEYRLNEGEFMLWDDTFEH CCCCCCCCCCCHHHHHHHHHEEEECCCCCCCCCEEEEEECCCEEEECCCCEEEECCCCCC EVWNDSDQVRTVLLLDIRRRDLPTGLRMLSNGIIALVRLNVRWIQRQF CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA