| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is paaE [H]
Identifier: 157371316
GI number: 157371316
Start: 3385556
End: 3386614
Strand: Direct
Name: paaE [H]
Synonym: Spro_3076
Alternate gene names: 157371316
Gene position: 3385556-3386614 (Clockwise)
Preceding gene: 157371315
Following gene: 157371317
Centisome position: 62.13
GC content: 59.11
Gene sequence:
>1059_bases ATGACGGTCTTCCATCGCCTGAACGTCGCCGCCATCGAGCGCGAAACGCCGGACGCCGTAGCCATCACTCTGCGGGTACC CGAAGAACTGAAAAGTCACTATTGCTATACGCCCGGCCAGCACCTGACGTTGAAGGCGCTGGTCGACGGCGAAGAGCTGC GCCGCTGCTACTCCATTTGCAGCTCGCCGCAGGAAGGTTTGCTGCAAATCGGCGTTAAAGCCATTCATCAGGGCCGCTTC TCTTCGTTCGTTAACCGGCAGCTGTTGGTCGGTGATGCGCTGGAAGTGATGGTGCCGCAAGGGCGATTCGGCTATCAACC GCAGGCGGAGAACAGCGGTAACTATCTGGCGATTGCGGCCGGTTCCGGCATTACGCCGATGCTGTCGATCATCAAGGCCA CGTTGCAACTCGAGCCAAACAGCAGCTTCACGCTGATTTACGGCAACCGCAGCAGCCGCTCGGTGATGTTCAAAGAAGCA CTGTCCGATCTGAAGAACCGCTATCCCCAGCGCTTTCAGCCGCTGTACCTGTTCAGCCAGGAAAATCTTGATAGCCCACT GCTCAGCGGCCGCATCGACCGTGAGCACCTGCTGGCGATCGGCGATGCATTACTCAATTACCGCGACTATGACCACGCCT TTATCTGCGGGCCTGAGAGCATGATGGACGACGCCCAGAGCGTACTTGAACAGGCTGGCATGCCCGCCGGGCACATTCAC AGCGAACGTTTTAACACCAGCGGTATGGTTGCCCGGCCGGTCAATGACGCCAACCGCAACGCCACCCGGGTCGAAATTTT GCTCGATGGCCGTCGGCTGGATATCGAAGTAGGCGCCCAGGATGACAGCATTCTGGATGCGGCGCTGCGTCAGGGTGCTG ACCTGCCCTACGCCTGCAAAGGCGGGGTGTGCGCGACCTGCAAGTGCCGGTTAAAGGCCGGTCAGGTGGATATGGCGGTT AACTACAGCCTGGAGCCGGATCAACTGGCGGCGGGTTACGTATTGAGTTGTCAGTCGTGGCCGCGTGGCGACGGTGTGAT ATTGGACTTTGACGTATAG
Upstream 100 bases:
>100_bases AGAAAATCAGCGAATTCGGCTCCACCGCCTGTAAGGCGCTGTACCGCTGTTGCGATTGCCGTGAACCCTTCGACTACTTC AAATGCATTTAGGAATAACC
Downstream 100 bases:
>100_bases GAGCCGCCGATGGAAACCCCTTTTGTCCTGCGACAGCAACACCAGCGAGTGGTGACACTGACACTGCATCGCCCAGAGGC GCGCAACGCCCTGAGCACCC
Product: phenylacetate-CoA oxygenase/reductase subunit PaaK
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MTVFHRLNVAAIERETPDAVAITLRVPEELKSHYCYTPGQHLTLKALVDGEELRRCYSICSSPQEGLLQIGVKAIHQGRF SSFVNRQLLVGDALEVMVPQGRFGYQPQAENSGNYLAIAAGSGITPMLSIIKATLQLEPNSSFTLIYGNRSSRSVMFKEA LSDLKNRYPQRFQPLYLFSQENLDSPLLSGRIDREHLLAIGDALLNYRDYDHAFICGPESMMDDAQSVLEQAGMPAGHIH SERFNTSGMVARPVNDANRNATRVEILLDGRRLDIEVGAQDDSILDAALRQGADLPYACKGGVCATCKCRLKAGQVDMAV NYSLEPDQLAAGYVLSCQSWPRGDGVILDFDV
Sequences:
>Translated_352_residues MTVFHRLNVAAIERETPDAVAITLRVPEELKSHYCYTPGQHLTLKALVDGEELRRCYSICSSPQEGLLQIGVKAIHQGRF SSFVNRQLLVGDALEVMVPQGRFGYQPQAENSGNYLAIAAGSGITPMLSIIKATLQLEPNSSFTLIYGNRSSRSVMFKEA LSDLKNRYPQRFQPLYLFSQENLDSPLLSGRIDREHLLAIGDALLNYRDYDHAFICGPESMMDDAQSVLEQAGMPAGHIH SERFNTSGMVARPVNDANRNATRVEILLDGRRLDIEVGAQDDSILDAALRQGADLPYACKGGVCATCKCRLKAGQVDMAV NYSLEPDQLAAGYVLSCQSWPRGDGVILDFDV >Mature_351_residues TVFHRLNVAAIERETPDAVAITLRVPEELKSHYCYTPGQHLTLKALVDGEELRRCYSICSSPQEGLLQIGVKAIHQGRFS SFVNRQLLVGDALEVMVPQGRFGYQPQAENSGNYLAIAAGSGITPMLSIIKATLQLEPNSSFTLIYGNRSSRSVMFKEAL SDLKNRYPQRFQPLYLFSQENLDSPLLSGRIDREHLLAIGDALLNYRDYDHAFICGPESMMDDAQSVLEQAGMPAGHIHS ERFNTSGMVARPVNDANRNATRVEILLDGRRLDIEVGAQDDSILDAALRQGADLPYACKGGVCATCKCRLKAGQVDMAVN YSLEPDQLAAGYVLSCQSWPRGDGVILDFDV
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG1018
COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Homo sapiens, GI49574502, Length=217, Percent_Identity=28.110599078341, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI134133308, Length=239, Percent_Identity=27.1966527196653, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI1787658, Length=352, Percent_Identity=62.5, Blast_Score=444, Evalue=1e-126, Organism=Escherichia coli, GI1787098, Length=343, Percent_Identity=27.6967930029155, Blast_Score=123, Evalue=2e-29, Organism=Escherichia coli, GI1788104, Length=319, Percent_Identity=26.0188087774295, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1790359, Length=209, Percent_Identity=23.9234449760766, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17563928, Length=224, Percent_Identity=26.3392857142857, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323510, Length=206, Percent_Identity=28.1553398058252, Blast_Score=76, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6322146, Length=199, Percent_Identity=28.1407035175879, Blast_Score=76, Evalue=7e-15, Organism=Drosophila melanogaster, GI281366101, Length=221, Percent_Identity=26.2443438914027, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24662934, Length=221, Percent_Identity=26.2443438914027, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24662938, Length=221, Percent_Identity=26.2443438914027, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR017927 - InterPro: IPR001041 - InterPro: IPR001709 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR011884 - InterPro: IPR001221 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 38772; Mature: 38640
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVFHRLNVAAIERETPDAVAITLRVPEELKSHYCYTPGQHLTLKALVDGEELRRCYSIC CCEEEECCEEEEECCCCCEEEEEEECCHHHHHCCCCCCCCCEEEEEEECHHHHHHHHHHH SSPQEGLLQIGVKAIHQGRFSSFVNRQLLVGDALEVMVPQGRFGYQPQAENSGNYLAIAA CCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEECCCCCCCCCCCCCCCCEEEEEE GSGITPMLSIIKATLQLEPNSSFTLIYGNRSSRSVMFKEALSDLKNRYPQRFQPLYLFSQ CCCCHHHHHHHHHHEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEC ENLDSPLLSGRIDREHLLAIGDALLNYRDYDHAFICGPESMMDDAQSVLEQAGMPAGHIH CCCCCCHHCCCCCHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCC SERFNTSGMVARPVNDANRNATRVEILLDGRRLDIEVGAQDDSILDAALRQGADLPYACK CCCCCCCCEEEECCCCCCCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHCCCCCCEECC GGVCATCKCRLKAGQVDMAVNYSLEPDQLAAGYVLSCQSWPRGDGVILDFDV CCEEEEEEEEEECCCEEEEEECCCCHHHHCCCEEEEECCCCCCCCEEEEECC >Mature Secondary Structure TVFHRLNVAAIERETPDAVAITLRVPEELKSHYCYTPGQHLTLKALVDGEELRRCYSIC CEEEECCEEEEECCCCCEEEEEEECCHHHHHCCCCCCCCCEEEEEEECHHHHHHHHHHH SSPQEGLLQIGVKAIHQGRFSSFVNRQLLVGDALEVMVPQGRFGYQPQAENSGNYLAIAA CCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEECCCCCCCCCCCCCCCCEEEEEE GSGITPMLSIIKATLQLEPNSSFTLIYGNRSSRSVMFKEALSDLKNRYPQRFQPLYLFSQ CCCCHHHHHHHHHHEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEC ENLDSPLLSGRIDREHLLAIGDALLNYRDYDHAFICGPESMMDDAQSVLEQAGMPAGHIH CCCCCCHHCCCCCHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCC SERFNTSGMVARPVNDANRNATRVEILLDGRRLDIEVGAQDDSILDAALRQGADLPYACK CCCCCCCCEEEECCCCCCCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHCCCCCCEECC GGVCATCKCRLKAGQVDMAVNYSLEPDQLAAGYVLSCQSWPRGDGVILDFDV CCEEEEEEEEEECCCEEEEEECCCCHHHHCCCEEEEECCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FAD [C]
Metal ions: Iron-Sulfur [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9097039; 9278503; 10766858 [H]