| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is paaD [H]
Identifier: 157371315
GI number: 157371315
Start: 3385050
End: 3385547
Strand: Direct
Name: paaD [H]
Synonym: Spro_3075
Alternate gene names: 157371315
Gene position: 3385050-3385547 (Clockwise)
Preceding gene: 157371314
Following gene: 157371316
Centisome position: 62.12
GC content: 61.85
Gene sequence:
>498_bases ATGAATATTACCCGGCTGCAAGCCGCCGAAATCCCGCAAATCTGGCACTGCCTGCAACAGATCAGCGATCCGGAGCTGCC GGTGCTGTCGATTACCGATCTGGGCATGGTGCGCGACGTAGTAGCCGACGGCGGTGGCTGGCGCATTACCTTCACGCCGA CCTATTCCGGCTGCCCCGCCACCGAGTTCCTGCTCGAAGCGATCGAACAGCAGTTGACTGCGGCCGGTTTCAGCCCGGTA AAAGTGGATATCCGCCTGAGTCCGGCCTGGACTACCGACTGGATGAATGCGGATGCGCGTGAGCGGCTGCGGGAATATGG CGTCGCGCCGCCACAGGGCCATACCTGCGACAAACCCCAGGCGCACGGCCCGGTGCCCTGCCCGCGATGCGGCAGCACCC ACAGCGAGAAAATCAGCGAATTCGGCTCCACCGCCTGTAAGGCGCTGTACCGCTGTTGCGATTGCCGTGAACCCTTCGAC TACTTCAAATGCATTTAG
Upstream 100 bases:
>100_bases TGGCAAACAGGGACGGCACAGCGAGCACCTCGGCCCGTTATTGGCGGAGATGCAGTTTCTGCAACGCGCCTATCCCAACG CGAACTGGTAGGAGGCCGTC
Downstream 100 bases:
>100_bases GAATAACCATGACGGTCTTCCATCGCCTGAACGTCGCCGCCATCGAGCGCGAAACGCCGGACGCCGTAGCCATCACTCTG CGGGTACCCGAAGAACTGAA
Product: phenylacetate-CoA oxygenase subunit PaaJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MNITRLQAAEIPQIWHCLQQISDPELPVLSITDLGMVRDVVADGGGWRITFTPTYSGCPATEFLLEAIEQQLTAAGFSPV KVDIRLSPAWTTDWMNADARERLREYGVAPPQGHTCDKPQAHGPVPCPRCGSTHSEKISEFGSTACKALYRCCDCREPFD YFKCI
Sequences:
>Translated_165_residues MNITRLQAAEIPQIWHCLQQISDPELPVLSITDLGMVRDVVADGGGWRITFTPTYSGCPATEFLLEAIEQQLTAAGFSPV KVDIRLSPAWTTDWMNADARERLREYGVAPPQGHTCDKPQAHGPVPCPRCGSTHSEKISEFGSTACKALYRCCDCREPFD YFKCI >Mature_165_residues MNITRLQAAEIPQIWHCLQQISDPELPVLSITDLGMVRDVVADGGGWRITFTPTYSGCPATEFLLEAIEQQLTAAGFSPV KVDIRLSPAWTTDWMNADARERLREYGVAPPQGHTCDKPQAHGPVPCPRCGSTHSEKISEFGSTACKALYRCCDCREPFD YFKCI
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG2151
COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510939, Length=158, Percent_Identity=66.4556962025316, Blast_Score=218, Evalue=2e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002744 - InterPro: IPR011883 [H]
Pfam domain/function: PF01883 DUF59 [H]
EC number: NA
Molecular weight: Translated: 18319; Mature: 18319
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: PS01186 EGF_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 6.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNITRLQAAEIPQIWHCLQQISDPELPVLSITDLGMVRDVVADGGGWRITFTPTYSGCPA CCCCCCCHHCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCEEEEECCCCCCCCH TEFLLEAIEQQLTAAGFSPVKVDIRLSPAWTTDWMNADARERLREYGVAPPQGHTCDKPQ HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHCCCHHHHHHHHCCCCCCCCCCCCCCC AHGPVPCPRCGSTHSEKISEFGSTACKALYRCCDCREPFDYFKCI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC >Mature Secondary Structure MNITRLQAAEIPQIWHCLQQISDPELPVLSITDLGMVRDVVADGGGWRITFTPTYSGCPA CCCCCCCHHCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCEEEEECCCCCCCCH TEFLLEAIEQQLTAAGFSPVKVDIRLSPAWTTDWMNADARERLREYGVAPPQGHTCDKPQ HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHCCCHHHHHHHHCCCCCCCCCCCCCCC AHGPVPCPRCGSTHSEKISEFGSTACKALYRCCDCREPFDYFKCI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]