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The map label for this gene is clpV1 [H]

Identifier: 157371253

GI number: 157371253

Start: 3314184

End: 3316847

Strand: Direct

Name: clpV1 [H]

Synonym: Spro_3013

Alternate gene names: 157371253

Gene position: 3314184-3316847 (Clockwise)

Preceding gene: 157371252

Following gene: 157371254

Centisome position: 60.82

GC content: 61.82

Gene sequence:

>2664_bases
ATGTCTGAAATCAGCCGCTCGGTATTATTTGGCAAACTCGATAGCCTGTTATTCACCTCTCTGGAAAGTGCGACGGCGTT
TTGCAAGCTGCGCGGTAACCCCTACGTTGAGCTGGCGCACTGGCTGCATCAACTGATGCAGGCACCGGAGGCGGACCTGC
AACAGGTGATCCGCCACTTTGCGCTGGATGAGGGGCAACTGGCGCGTGACATCGTCGAGGCGCTCGATCGCCTGCCGCGC
GGTGCCAGCGCGATTTCCGATCTGTCCGAACATATCGACAGCGCGGTGGAACGGGCCTGGGTTTATGGCTCACTGAAATT
CGGTGCTGCGCAGATCCGCGGCGGCCACCTGCTGCTCGGCGTCCTGAAAACCTACAGCCTGCGCCACTTGCTGAAAGCCA
TCTCCTCACAGTTTGATCGCATCAACGCCGATCTGCTGATGGAGCAATTTGCCACTATCACCGCCCACTCGGCGGAAAAC
AGCCTGACGGCGAGCGCCCAGGCCGACACCACGCCGACGGCAGCGCAGACCGGTGGCAGCGTGCTGGCGCAATATGCTCA
GGATTTGACGGCCAAGGCGCGTAATGGCGAGATTGACCCGGTGACCGGGCGTGACGAGGAAATCCGCCAGATTGTCGATA
TTCTGATGCGTCGCCGCCAGAACAACCCGCTGCTGACCGGTGAGGCCGGGGTTGGCAAAACCGCCGTGGTCGAAGGCCTG
GCGCTGCGTATCGTGGCCGGTGACGTTCCGCCACAGCTGCGCGACGTCCAGCTGTATCTGCTGGATATCGGCATGCTGCA
GGCCGGGGCTGGGGTGAAGGGCGAGTTCGAAAAACGCCTGCAAACGGTGATTGACGAAGTTCAATCCAGCCCCACCCCGA
TCATTTTGTTTATCGATGAGATCCATACGCTGATTGGTGCCGGTGGCCCACAGGGCACCGGCGACGCAGCCAACCTGTTG
AAGCCGGCGCTGGCACGCGGCCAATTACGTACCGTCGGGGCCACTACCTGGTCGGAATACAAAAAATACATTGAGAAAGA
TCCGGCGCTGACCCGCCGTTTCCAGGTGGTGCAGGTGCATGAACCGAGCGAAGACAAAGCGCTGCTGATGCTGCGCAGCA
CCGTCAGCCCGCTGGAACAGCACCACCGCGTGCTGCTGCTCGATGAGGCAGTCGACGCCGCCGTGCGCCTGTCGCATCGC
TACATCCCGGCACGCCAGTTGCCGGACAAGGCCGTGGCGCTGCTGGATACCGCCTGCGCCCGCGTGGCGGTCAGCCAACA
TGCCGAGCCGGCCCAGGTGGAAGACTGCCGTCACCGCATTGAAGCGTTGCAGATTGAATGGGATATCGCCCGGCGCGAAG
CCAAGGTCGGTATCGGCAATCCGCAGCGCCCACAGGATATCGAGGCTCAGTTGGCACTGTTGCAACAACAACTCGAGCAG
CTCACTGCCCGCTGGCAGGAGGAGTTGGCGCTGATCCAACAGATTATCGACCTGCGCGCCCAGTTGCATCGGGAAGAAAT
TGAGGCTGAACCGACTGACGAGGCCACCGAGGAGCCACAGCCCGCGCCCTCTGCCGATGAACTGCGCGCGCAATTGGCGC
AGTTGCAGCAACAGCTTGGCGAACTGCAGGGCGAGGCCCCGCTGATTTTCGCCGCCGTCGATGCCAACGTGGTGGCCGCC
GTGGTGTCCGACTGGACCGGCATCCCGCTGGGCCGCATGGTGAAAAACGAGATCGACGCGGTACTGCAATTGGCGGATAC
GCTGAACCAGCGGGTTATCGGCCAACGGCATGCACTGGATCTGATCGCCCGTCGGGTACGCACCTCACGCGCGCGGCTGG
ACGATCCGAACAAGCCGGTCGGGGTTTTCCTGTTGGCAGGCCCTTCCGGCGTAGGGAAAACCGAAACCGCGCTGGCGCTG
GCGGAAACGCTGTACGGCGGCGAGCAGAACGTGATTACCATCAACATGAGCGAGTTCCAGGAGTCGCATACCGTTTCAAC
CCTGAAAGGTGCCCCTCCCGGCTATGTGGGTTACGGCGAGGGTGGCGTGCTGACCGAAGCGGTGCGCCGTCGCCCTTACA
GCGTGGTGCTGCTGGACGAAATAGAAAAAGCCCACCCGGACGTGCACGAGATCTTCTTCCAGGTGTTCGACAAAGGCTGG
ATGGAGGATGGCGAAGGCCGCCACATCGATTTCCGTAACACCATCATTATTCTGACCTCTAACGTCGGCACCGACCTGAT
CGCCGGGCTGTGCAGCGATGCGGACCTGATGCCGGAGCCGGAGGCACTGAGCGGCGCCCTGCGCGAACCGCTGCTGTCGG
TATTCCCGGCGGCGCTGCTCGGCCGCTTGCTGGTGGTGCCTTACTACCCACTGACCGACGCCACGCTGGGCAATATTGTG
CGCCTGCAACTGGGACGAGTGCAGCGCCGACTGGCGGAGAACCACGATATCGCCTGTACCTTCGACGATGCGGTGATCGA
GCAAATCGTCAGCCGCTGCACCGAGGTGGAGTCCGGCGGCCGCATGGTCGACGCTATTTTGACCAACACCCTGCTGCCGC
AGATCAGCCACACCTTACTGACCGGCAGCGCCAACGATCAGCGCTATCGCCAACTGCATATCGCGCTGCAGCAAAACGAG
TTTATTTGTCAATTTCAGGCATAA

Upstream 100 bases:

>100_bases
CTTGACGATCTGATCTTCAGCCCCGAACCGCTGGAAAACCCGTTCTGACTATTATTTTGGCCTGAGCCGCATAGCGCTCC
GCCACGACCTGAGGAAAACC

Downstream 100 bases:

>100_bases
CGCCGCGGCCGCCGGTATGGCGGCCATCGTTCACAGAGAGTCATCATTATGTCGGGAACCGGGGTAAGCAAACCGAATTC
AAACAGCCTGCCGATCGGCT

Product: ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 887; Mature: 886

Protein sequence:

>887_residues
MSEISRSVLFGKLDSLLFTSLESATAFCKLRGNPYVELAHWLHQLMQAPEADLQQVIRHFALDEGQLARDIVEALDRLPR
GASAISDLSEHIDSAVERAWVYGSLKFGAAQIRGGHLLLGVLKTYSLRHLLKAISSQFDRINADLLMEQFATITAHSAEN
SLTASAQADTTPTAAQTGGSVLAQYAQDLTAKARNGEIDPVTGRDEEIRQIVDILMRRRQNNPLLTGEAGVGKTAVVEGL
ALRIVAGDVPPQLRDVQLYLLDIGMLQAGAGVKGEFEKRLQTVIDEVQSSPTPIILFIDEIHTLIGAGGPQGTGDAANLL
KPALARGQLRTVGATTWSEYKKYIEKDPALTRRFQVVQVHEPSEDKALLMLRSTVSPLEQHHRVLLLDEAVDAAVRLSHR
YIPARQLPDKAVALLDTACARVAVSQHAEPAQVEDCRHRIEALQIEWDIARREAKVGIGNPQRPQDIEAQLALLQQQLEQ
LTARWQEELALIQQIIDLRAQLHREEIEAEPTDEATEEPQPAPSADELRAQLAQLQQQLGELQGEAPLIFAAVDANVVAA
VVSDWTGIPLGRMVKNEIDAVLQLADTLNQRVIGQRHALDLIARRVRTSRARLDDPNKPVGVFLLAGPSGVGKTETALAL
AETLYGGEQNVITINMSEFQESHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHPDVHEIFFQVFDKGW
MEDGEGRHIDFRNTIIILTSNVGTDLIAGLCSDADLMPEPEALSGALREPLLSVFPAALLGRLLVVPYYPLTDATLGNIV
RLQLGRVQRRLAENHDIACTFDDAVIEQIVSRCTEVESGGRMVDAILTNTLLPQISHTLLTGSANDQRYRQLHIALQQNE
FICQFQA

Sequences:

>Translated_887_residues
MSEISRSVLFGKLDSLLFTSLESATAFCKLRGNPYVELAHWLHQLMQAPEADLQQVIRHFALDEGQLARDIVEALDRLPR
GASAISDLSEHIDSAVERAWVYGSLKFGAAQIRGGHLLLGVLKTYSLRHLLKAISSQFDRINADLLMEQFATITAHSAEN
SLTASAQADTTPTAAQTGGSVLAQYAQDLTAKARNGEIDPVTGRDEEIRQIVDILMRRRQNNPLLTGEAGVGKTAVVEGL
ALRIVAGDVPPQLRDVQLYLLDIGMLQAGAGVKGEFEKRLQTVIDEVQSSPTPIILFIDEIHTLIGAGGPQGTGDAANLL
KPALARGQLRTVGATTWSEYKKYIEKDPALTRRFQVVQVHEPSEDKALLMLRSTVSPLEQHHRVLLLDEAVDAAVRLSHR
YIPARQLPDKAVALLDTACARVAVSQHAEPAQVEDCRHRIEALQIEWDIARREAKVGIGNPQRPQDIEAQLALLQQQLEQ
LTARWQEELALIQQIIDLRAQLHREEIEAEPTDEATEEPQPAPSADELRAQLAQLQQQLGELQGEAPLIFAAVDANVVAA
VVSDWTGIPLGRMVKNEIDAVLQLADTLNQRVIGQRHALDLIARRVRTSRARLDDPNKPVGVFLLAGPSGVGKTETALAL
AETLYGGEQNVITINMSEFQESHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHPDVHEIFFQVFDKGW
MEDGEGRHIDFRNTIIILTSNVGTDLIAGLCSDADLMPEPEALSGALREPLLSVFPAALLGRLLVVPYYPLTDATLGNIV
RLQLGRVQRRLAENHDIACTFDDAVIEQIVSRCTEVESGGRMVDAILTNTLLPQISHTLLTGSANDQRYRQLHIALQQNE
FICQFQA
>Mature_886_residues
SEISRSVLFGKLDSLLFTSLESATAFCKLRGNPYVELAHWLHQLMQAPEADLQQVIRHFALDEGQLARDIVEALDRLPRG
ASAISDLSEHIDSAVERAWVYGSLKFGAAQIRGGHLLLGVLKTYSLRHLLKAISSQFDRINADLLMEQFATITAHSAENS
LTASAQADTTPTAAQTGGSVLAQYAQDLTAKARNGEIDPVTGRDEEIRQIVDILMRRRQNNPLLTGEAGVGKTAVVEGLA
LRIVAGDVPPQLRDVQLYLLDIGMLQAGAGVKGEFEKRLQTVIDEVQSSPTPIILFIDEIHTLIGAGGPQGTGDAANLLK
PALARGQLRTVGATTWSEYKKYIEKDPALTRRFQVVQVHEPSEDKALLMLRSTVSPLEQHHRVLLLDEAVDAAVRLSHRY
IPARQLPDKAVALLDTACARVAVSQHAEPAQVEDCRHRIEALQIEWDIARREAKVGIGNPQRPQDIEAQLALLQQQLEQL
TARWQEELALIQQIIDLRAQLHREEIEAEPTDEATEEPQPAPSADELRAQLAQLQQQLGELQGEAPLIFAAVDANVVAAV
VSDWTGIPLGRMVKNEIDAVLQLADTLNQRVIGQRHALDLIARRVRTSRARLDDPNKPVGVFLLAGPSGVGKTETALALA
ETLYGGEQNVITINMSEFQESHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHPDVHEIFFQVFDKGWM
EDGEGRHIDFRNTIIILTSNVGTDLIAGLCSDADLMPEPEALSGALREPLLSVFPAALLGRLLVVPYYPLTDATLGNIVR
LQLGRVQRRLAENHDIACTFDDAVIEQIVSRCTEVESGGRMVDAILTNTLLPQISHTLLTGSANDQRYRQLHIALQQNEF
ICQFQA

Specific function: Required for secretion of hcp1 probably by providing the energy source for its translocation [H]

COG id: COG0542

COG function: function code O; ATPases with chaperone activity, ATP-binding subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the clpA/clpB family [H]

Homologues:

Organism=Homo sapiens, GI13540606, Length=299, Percent_Identity=31.7725752508361, Blast_Score=145, Evalue=2e-34,
Organism=Escherichia coli, GI1788943, Length=786, Percent_Identity=40.0763358778626, Blast_Score=529, Evalue=1e-151,
Organism=Escherichia coli, GI1787109, Length=341, Percent_Identity=39.2961876832845, Blast_Score=229, Evalue=5e-61,
Organism=Saccharomyces cerevisiae, GI6320464, Length=689, Percent_Identity=40.3483309143687, Blast_Score=485, Evalue=1e-137,
Organism=Saccharomyces cerevisiae, GI6323002, Length=860, Percent_Identity=31.9767441860465, Blast_Score=438, Evalue=1e-123,

Paralogues:

None

Copy number: 560 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013093
- InterPro:   IPR003959
- InterPro:   IPR017729
- InterPro:   IPR018368
- InterPro:   IPR001270
- InterPro:   IPR019489
- InterPro:   IPR023150 [H]

Pfam domain/function: PF00004 AAA; PF07724 AAA_2; PF10431 ClpB_D2-small [H]

EC number: NA

Molecular weight: Translated: 97358; Mature: 97227

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS00870 CLPAB_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEISRSVLFGKLDSLLFTSLESATAFCKLRGNPYVELAHWLHQLMQAPEADLQQVIRHF
CCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHH
ALDEGQLARDIVEALDRLPRGASAISDLSEHIDSAVERAWVYGSLKFGAAQIRGGHLLLG
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECHHHCCCCHHHHH
VLKTYSLRHLLKAISSQFDRINADLLMEQFATITAHSAENSLTASAQADTTPTAAQTGGS
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCHH
VLAQYAQDLTAKARNGEIDPVTGRDEEIRQIVDILMRRRQNNPLLTGEAGVGKTAVVEGL
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHH
ALRIVAGDVPPQLRDVQLYLLDIGMLQAGAGVKGEFEKRLQTVIDEVQSSPTPIILFIDE
EEEEEECCCCCCHHHHEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHH
IHTLIGAGGPQGTGDAANLLKPALARGQLRTVGATTWSEYKKYIEKDPALTRRFQVVQVH
HHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCHHHEEEEEEEE
EPSEDKALLMLRSTVSPLEQHHRVLLLDEAVDAAVRLSHRYIPARQLPDKAVALLDTACA
CCCCCHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHH
RVAVSQHAEPAQVEDCRHRIEALQIEWDIARREAKVGIGNPQRPQDIEAQLALLQQQLEQ
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
LTARWQEELALIQQIIDLRAQLHREEIEAEPTDEATEEPQPAPSADELRAQLAQLQQQLG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
ELQGEAPLIFAAVDANVVAAVVSDWTGIPLGRMVKNEIDAVLQLADTLNQRVIGQRHALD
HHCCCCCEEEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIARRVRTSRARLDDPNKPVGVFLLAGPSGVGKTETALALAETLYGGEQNVITINMSEFQ
HHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHH
ESHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHPDVHEIFFQVFDKGW
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEHHHHHHCCCHHHHHHHHHHHHC
MEDGEGRHIDFRNTIIILTSNVGTDLIAGLCSDADLMPEPEALSGALREPLLSVFPAALL
CCCCCCCEEEECCEEEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
GRLLVVPYYPLTDATLGNIVRLQLGRVQRRLAENHDIACTFDDAVIEQIVSRCTEVESGG
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCC
RMVDAILTNTLLPQISHTLLTGSANDQRYRQLHIALQQNEFICQFQA
HHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHEEECCCEEEEECC
>Mature Secondary Structure 
SEISRSVLFGKLDSLLFTSLESATAFCKLRGNPYVELAHWLHQLMQAPEADLQQVIRHF
CHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHH
ALDEGQLARDIVEALDRLPRGASAISDLSEHIDSAVERAWVYGSLKFGAAQIRGGHLLLG
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECHHHCCCCHHHHH
VLKTYSLRHLLKAISSQFDRINADLLMEQFATITAHSAENSLTASAQADTTPTAAQTGGS
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCHH
VLAQYAQDLTAKARNGEIDPVTGRDEEIRQIVDILMRRRQNNPLLTGEAGVGKTAVVEGL
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHH
ALRIVAGDVPPQLRDVQLYLLDIGMLQAGAGVKGEFEKRLQTVIDEVQSSPTPIILFIDE
EEEEEECCCCCCHHHHEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHH
IHTLIGAGGPQGTGDAANLLKPALARGQLRTVGATTWSEYKKYIEKDPALTRRFQVVQVH
HHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCHHHEEEEEEEE
EPSEDKALLMLRSTVSPLEQHHRVLLLDEAVDAAVRLSHRYIPARQLPDKAVALLDTACA
CCCCCHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHH
RVAVSQHAEPAQVEDCRHRIEALQIEWDIARREAKVGIGNPQRPQDIEAQLALLQQQLEQ
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
LTARWQEELALIQQIIDLRAQLHREEIEAEPTDEATEEPQPAPSADELRAQLAQLQQQLG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
ELQGEAPLIFAAVDANVVAAVVSDWTGIPLGRMVKNEIDAVLQLADTLNQRVIGQRHALD
HHCCCCCEEEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIARRVRTSRARLDDPNKPVGVFLLAGPSGVGKTETALALAETLYGGEQNVITINMSEFQ
HHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHH
ESHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHPDVHEIFFQVFDKGW
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEHHHHHHCCCHHHHHHHHHHHHC
MEDGEGRHIDFRNTIIILTSNVGTDLIAGLCSDADLMPEPEALSGALREPLLSVFPAALL
CCCCCCCEEEECCEEEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
GRLLVVPYYPLTDATLGNIVRLQLGRVQRRLAENHDIACTFDDAVIEQIVSRCTEVESGG
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCC
RMVDAILTNTLLPQISHTLLTGSANDQRYRQLHIALQQNEFICQFQA
HHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]