| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157371244
Identifier: 157371244
GI number: 157371244
Start: 3303759
End: 3305264
Strand: Direct
Name: 157371244
Synonym: Spro_3004
Alternate gene names: NA
Gene position: 3303759-3305264 (Clockwise)
Preceding gene: 157371243
Following gene: 157371245
Centisome position: 60.63
GC content: 57.64
Gene sequence:
>1506_bases ATGAGCAACTCGCCTCAGCAACAAAAAGCGCTGCAGACCAGCGAAGCTTTCTCCAGCGATGAATTCAGCGCGCTGCTGAA CAAAGAGTTTCGTCCCAAGACCGATCAGGCCAAGGAAGCGGTAGAAAATGCGGTAAAAACCCTGGCGCAGCAGGCGCTGG AAAACACCGTGACGGTCTCCTCTGACGCCTATCGCACCATTCAGGCGCTGATCGCCGAAATCGACGAAAAACTGTCGCAA CAGGTTAACCAGATTATCCACCACGCCGAATTCCAGAAGCTGGAAGGCGCCTGGCATGGCCTGCACTATCTGGTCAACAA CTCCGAAACCGATGAAATGCTGAAAATCCGCTTTATGAGCATTTCCAAGCAGGAGCTGGGCCGCACGCTGAAGCGCCATA AAGGTGTGGGCTGGGATCAGAGCCCCATCTTCAAGAAAGTGTACGAGGAAGAGTACGGCCAGTTCGGCGGCGAACCCTTC GGTTGCCTGGTGGGCGATTACTACTTCGACCACAGCCCACAGGACGTAGAGTTGCTGGGTGAGATGGCGAAAATCAGTGC CGCCTCCCACTGCCCCTTCATCGCCGGTACCGCACCGAGCGTGATGCAGATGGAATCCTGGCAGGAGCTGTCCAACCCAC GCGATTTGACCAAGATCTTCCAAAATACCGAATACGCCGCCTGGCGCAGCCTGCGTGAATCGGAAGATGCCCGCTATCTG GGCCTGGTAATGCCGCGATTCCTGGCGCGCCTGCCGTATGGCATCCGAACCAATCCGGTTGACGAGTTCGACTTTGAGGA AGAAACCGACGGCGCGAACCACGGTAACTACACCTGGACCAACGCCGCCTACGCCATGGCCGCCAACATCAACCGTTCGT TCAAAGAGTTCGGTTGGTGTACCGCGATCCGTGGGGTGGAGTCTGGCGGTGCGGTAGAGAACCTGCCGTGCCACACCTTC CCAAGCGACGACGGCGGCGTGGACATGAAGTGCCCGACCGAGATCGCCATCAGCGATCGTCGCGAGGCCGAGCTGGCCAA GAACGGCTTCATGCCGTTGGTACACCGGAAAAACTCCGACTTTGCCGCCTTTATCGGTGCCCAGTCGCTGCAAAAGCCGG CCGAATACTACGACGCCGATGCATCTGCCAATGCTCAACTCTCCGCCCGTCTGCCTTATCTGTTCGCCTGCTGCCGCTTC GCGCATTACCTGAAGTGCATCGTCCGTGACAAGATCGGTTCTTTCCGCGAGCGCGACGATATGGAACGCTGGTTAAACGA CTGGATCATGAACTACGTGGATGGCGATCCGGCCAACTCCTCGCAGGAAACCAAGTCGCGCAAACCGCTGGCCGCTGCGG AAGTTCAGGTGGAAGAGATCGAAGACAACCCGGGCTACTACAGCGCCAAGTTCTTCCTGCGCCCACATTACCAATTGGAA GGCTTGACCGTCTCCCTGCGTCTGGTATCGAAACTGCCCTCACTGAAGCAGAACGACGCATCCTGA
Upstream 100 bases:
>100_bases GATCTCCAAAATCCTGCAAAACCCGGCCTTACTGCAATCCCTGACCGATGCGCCGAAACCGGCCGCCACGGACGACAACA ATCAGCGTGAGGACTAATCG
Downstream 100 bases:
>100_bases CGTGCTGAAAGTCAGGCCGTGGGTCTGGTGAAAACATTGCCGGTAATCCCGATGATGGTTATCAGCAGGATAACCCGCAG TAATCAGCATTGAGCCATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 501; Mature: 500
Protein sequence:
>501_residues MSNSPQQQKALQTSEAFSSDEFSALLNKEFRPKTDQAKEAVENAVKTLAQQALENTVTVSSDAYRTIQALIAEIDEKLSQ QVNQIIHHAEFQKLEGAWHGLHYLVNNSETDEMLKIRFMSISKQELGRTLKRHKGVGWDQSPIFKKVYEEEYGQFGGEPF GCLVGDYYFDHSPQDVELLGEMAKISAASHCPFIAGTAPSVMQMESWQELSNPRDLTKIFQNTEYAAWRSLRESEDARYL GLVMPRFLARLPYGIRTNPVDEFDFEEETDGANHGNYTWTNAAYAMAANINRSFKEFGWCTAIRGVESGGAVENLPCHTF PSDDGGVDMKCPTEIAISDRREAELAKNGFMPLVHRKNSDFAAFIGAQSLQKPAEYYDADASANAQLSARLPYLFACCRF AHYLKCIVRDKIGSFRERDDMERWLNDWIMNYVDGDPANSSQETKSRKPLAAAEVQVEEIEDNPGYYSAKFFLRPHYQLE GLTVSLRLVSKLPSLKQNDAS
Sequences:
>Translated_501_residues MSNSPQQQKALQTSEAFSSDEFSALLNKEFRPKTDQAKEAVENAVKTLAQQALENTVTVSSDAYRTIQALIAEIDEKLSQ QVNQIIHHAEFQKLEGAWHGLHYLVNNSETDEMLKIRFMSISKQELGRTLKRHKGVGWDQSPIFKKVYEEEYGQFGGEPF GCLVGDYYFDHSPQDVELLGEMAKISAASHCPFIAGTAPSVMQMESWQELSNPRDLTKIFQNTEYAAWRSLRESEDARYL GLVMPRFLARLPYGIRTNPVDEFDFEEETDGANHGNYTWTNAAYAMAANINRSFKEFGWCTAIRGVESGGAVENLPCHTF PSDDGGVDMKCPTEIAISDRREAELAKNGFMPLVHRKNSDFAAFIGAQSLQKPAEYYDADASANAQLSARLPYLFACCRF AHYLKCIVRDKIGSFRERDDMERWLNDWIMNYVDGDPANSSQETKSRKPLAAAEVQVEEIEDNPGYYSAKFFLRPHYQLE GLTVSLRLVSKLPSLKQNDAS >Mature_500_residues SNSPQQQKALQTSEAFSSDEFSALLNKEFRPKTDQAKEAVENAVKTLAQQALENTVTVSSDAYRTIQALIAEIDEKLSQQ VNQIIHHAEFQKLEGAWHGLHYLVNNSETDEMLKIRFMSISKQELGRTLKRHKGVGWDQSPIFKKVYEEEYGQFGGEPFG CLVGDYYFDHSPQDVELLGEMAKISAASHCPFIAGTAPSVMQMESWQELSNPRDLTKIFQNTEYAAWRSLRESEDARYLG LVMPRFLARLPYGIRTNPVDEFDFEEETDGANHGNYTWTNAAYAMAANINRSFKEFGWCTAIRGVESGGAVENLPCHTFP SDDGGVDMKCPTEIAISDRREAELAKNGFMPLVHRKNSDFAAFIGAQSLQKPAEYYDADASANAQLSARLPYLFACCRFA HYLKCIVRDKIGSFRERDDMERWLNDWIMNYVDGDPANSSQETKSRKPLAAAEVQVEEIEDNPGYYSAKFFLRPHYQLEG LTVSLRLVSKLPSLKQNDAS
Specific function: Unknown
COG id: COG3517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56616; Mature: 56485
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSPQQQKALQTSEAFSSDEFSALLNKEFRPKTDQAKEAVENAVKTLAQQALENTVTVS CCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEECC SDAYRTIQALIAEIDEKLSQQVNQIIHHAEFQKLEGAWHGLHYLVNNSETDEMLKIRFMS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHH ISKQELGRTLKRHKGVGWDQSPIFKKVYEEEYGQFGGEPFGCLVGDYYFDHSPQDVELLG CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHEEECHHCCCCCCHHHHHH EMAKISAASHCPFIAGTAPSVMQMESWQELSNPRDLTKIFQNTEYAAWRSLRESEDARYL HHHHHHHHCCCCEECCCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCCCHHH GLVMPRFLARLPYGIRTNPVDEFDFEEETDGANHGNYTWTNAAYAMAANINRSFKEFGWC HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCHHHHHHHHH TAIRGVESGGAVENLPCHTFPSDDGGVDMKCPTEIAISDRREAELAKNGFMPLVHRKNSD HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHCCCCEEEECCCCC FAAFIGAQSLQKPAEYYDADASANAQLSARLPYLFACCRFAHYLKCIVRDKIGSFRERDD HHHHHCHHHHHCHHHHHCCCCCCCCEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MERWLNDWIMNYVDGDPANSSQETKSRKPLAAAEVQVEEIEDNPGYYSAKFFLRPHYQLE HHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHEEHHHHCCCCCEEEEEEEECCCEEEC GLTVSLRLVSKLPSLKQNDAS CCEEHHHHHHHCCCCCCCCCC >Mature Secondary Structure SNSPQQQKALQTSEAFSSDEFSALLNKEFRPKTDQAKEAVENAVKTLAQQALENTVTVS CCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEECC SDAYRTIQALIAEIDEKLSQQVNQIIHHAEFQKLEGAWHGLHYLVNNSETDEMLKIRFMS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHH ISKQELGRTLKRHKGVGWDQSPIFKKVYEEEYGQFGGEPFGCLVGDYYFDHSPQDVELLG CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHEEECHHCCCCCCHHHHHH EMAKISAASHCPFIAGTAPSVMQMESWQELSNPRDLTKIFQNTEYAAWRSLRESEDARYL HHHHHHHHCCCCEECCCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCCCHHH GLVMPRFLARLPYGIRTNPVDEFDFEEETDGANHGNYTWTNAAYAMAANINRSFKEFGWC HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCHHHHHHHHH TAIRGVESGGAVENLPCHTFPSDDGGVDMKCPTEIAISDRREAELAKNGFMPLVHRKNSD HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHCCCCEEEECCCCC FAAFIGAQSLQKPAEYYDADASANAQLSARLPYLFACCRFAHYLKCIVRDKIGSFRERDD HHHHHCHHHHHCHHHHHCCCCCCCCEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MERWLNDWIMNYVDGDPANSSQETKSRKPLAAAEVQVEEIEDNPGYYSAKFFLRPHYQLE HHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHEEHHHHCCCCCEEEEEEEECCCEEEC GLTVSLRLVSKLPSLKQNDAS CCEEHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA