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The map label for this gene is yncB [H]

Identifier: 157371232

GI number: 157371232

Start: 3290083

End: 3291117

Strand: Direct

Name: yncB [H]

Synonym: Spro_2992

Alternate gene names: 157371232

Gene position: 3290083-3291117 (Clockwise)

Preceding gene: 157371231

Following gene: 157371234

Centisome position: 60.38

GC content: 58.94

Gene sequence:

>1035_bases
ATGTCCCAGTCTATGCAACACAACCGCCGTTTTTTACTTGCCTCACGCCCGCATGGTGAGCCTACCGCAGACAATTTCCG
CCTGGAAAAAGTGGCGACGCCGCAACCCGCTGCTGGCCAGGTACTGTTACGTACCGTCTATCTGTCACTGGATCCCTACA
TGCGCGGCCGGATGAGCGATGCCCCTTCTTACGCGCCACCGGTAGAGATCGGTGAAGTGATGGTTGGCGGCACGGTATCG
CGTGTTGTTACGTCACAGCATCCCGACTTCAAAGCCGGTGACTGGGTGTTGGGCTATGACGGCTGGCAGGATTATGCTTT
ATCTGACGGCAGTGGCTTGCGTAATCTCGGTCCGGACCAGAAACACCCTTCCCGCCTGCTCGGCGTCCTGGGCATGCCGG
GCTTCACCGCCTATATGGGCCTGTTGGATATTGGTCAGCCTAAACCCGGTGAAACCCTGGTGGTTGCTGCCGCCAGCGGC
GCCGTCGGATCGGTCGTCGGACAGGTCGCCAAACTGAAGGGTTGCCGCGTGGTCGGCGTGGCCGGCGGTAAAGAGAAATG
CCGCTATGTGGTAGAAGAGCTGGGCTTCGATGCCTGTGTCGATCACCGGGCGCCTGATTTTGCCGAGCAGCTGGCCGCTG
CCTGCCCGCAAGGTATCGACATTTACTACGAGAACGTTGGCGGTGCGGTGTTTGATGCAGTGATCCCGCTGCTCAATACC
CAGGCGCGTATTCCGGTGTGCGGCATTATCGCCCACTACAACGCCACCGACTTGCCTGCCGGCCCGGATCGCCTGCCGAT
GCTGCAGGGGCTGATTCTGCGTAAACGCATCCGCATGCAGGGCTTCATTATTTTTGATGACTATGCAGAAGGCTTTGGCG
AATTCCTGCAGCATATGGGCGAATGGGTCGAGCAAGGGAAAATCAAATTCCGCGAAGATCTGGTCGACGGACTGGAGAAT
GCGCCACAGGCGTTGATCGGCCTGCTGCACGGCAAGAACTTCGGCAAGCTGGTGATCCGCGTCGGCGACGAATAA

Upstream 100 bases:

>100_bases
GACGTACTGATCATTCCTCTTTAACGCTGAGCACATTCGGCTATTTCCTCTGGTCAATGATTGACTAGACTTGGGATTCC
ATCCGCATAAGGAATGTCTG

Downstream 100 bases:

>100_bases
CGCTAAAACCGCTACGGGTCGAAAATGAGTTCGACCCGATTTAACCCATTGATGATGCCGGCGGGCGCAACATGCGGCAC
TCCTACCATGAAACACTGAA

Product: alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MSQSMQHNRRFLLASRPHGEPTADNFRLEKVATPQPAAGQVLLRTVYLSLDPYMRGRMSDAPSYAPPVEIGEVMVGGTVS
RVVTSQHPDFKAGDWVLGYDGWQDYALSDGSGLRNLGPDQKHPSRLLGVLGMPGFTAYMGLLDIGQPKPGETLVVAAASG
AVGSVVGQVAKLKGCRVVGVAGGKEKCRYVVEELGFDACVDHRAPDFAEQLAAACPQGIDIYYENVGGAVFDAVIPLLNT
QARIPVCGIIAHYNATDLPAGPDRLPMLQGLILRKRIRMQGFIIFDDYAEGFGEFLQHMGEWVEQGKIKFREDLVDGLEN
APQALIGLLHGKNFGKLVIRVGDE

Sequences:

>Translated_344_residues
MSQSMQHNRRFLLASRPHGEPTADNFRLEKVATPQPAAGQVLLRTVYLSLDPYMRGRMSDAPSYAPPVEIGEVMVGGTVS
RVVTSQHPDFKAGDWVLGYDGWQDYALSDGSGLRNLGPDQKHPSRLLGVLGMPGFTAYMGLLDIGQPKPGETLVVAAASG
AVGSVVGQVAKLKGCRVVGVAGGKEKCRYVVEELGFDACVDHRAPDFAEQLAAACPQGIDIYYENVGGAVFDAVIPLLNT
QARIPVCGIIAHYNATDLPAGPDRLPMLQGLILRKRIRMQGFIIFDDYAEGFGEFLQHMGEWVEQGKIKFREDLVDGLEN
APQALIGLLHGKNFGKLVIRVGDE
>Mature_343_residues
SQSMQHNRRFLLASRPHGEPTADNFRLEKVATPQPAAGQVLLRTVYLSLDPYMRGRMSDAPSYAPPVEIGEVMVGGTVSR
VVTSQHPDFKAGDWVLGYDGWQDYALSDGSGLRNLGPDQKHPSRLLGVLGMPGFTAYMGLLDIGQPKPGETLVVAAASGA
VGSVVGQVAKLKGCRVVGVAGGKEKCRYVVEELGFDACVDHRAPDFAEQLAAACPQGIDIYYENVGGAVFDAVIPLLNTQ
ARIPVCGIIAHYNATDLPAGPDRLPMLQGLILRKRIRMQGFIIFDDYAEGFGEFLQHMGEWVEQGKIKFREDLVDGLENA
PQALIGLLHGKNFGKLVIRVGDE

Specific function: Unknown

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226246682, Length=347, Percent_Identity=37.7521613832853, Blast_Score=247, Evalue=1e-65,
Organism=Homo sapiens, GI226246680, Length=347, Percent_Identity=37.7521613832853, Blast_Score=247, Evalue=1e-65,
Organism=Homo sapiens, GI22748929, Length=347, Percent_Identity=37.7521613832853, Blast_Score=247, Evalue=1e-65,
Organism=Homo sapiens, GI226059159, Length=340, Percent_Identity=37.3529411764706, Blast_Score=228, Evalue=5e-60,
Organism=Homo sapiens, GI226059133, Length=340, Percent_Identity=37.3529411764706, Blast_Score=228, Evalue=5e-60,
Organism=Homo sapiens, GI226056130, Length=313, Percent_Identity=36.741214057508, Blast_Score=193, Evalue=2e-49,
Organism=Homo sapiens, GI28557745, Length=324, Percent_Identity=28.7037037037037, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI194239674, Length=321, Percent_Identity=24.9221183800623, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI13236495, Length=321, Percent_Identity=24.9221183800623, Blast_Score=71, Evalue=1e-12,
Organism=Escherichia coli, GI226510941, Length=345, Percent_Identity=70.7246376811594, Blast_Score=507, Evalue=1e-145,
Organism=Caenorhabditis elegans, GI133901712, Length=356, Percent_Identity=34.5505617977528, Blast_Score=202, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI133901710, Length=356, Percent_Identity=34.5505617977528, Blast_Score=202, Evalue=2e-52,
Organism=Saccharomyces cerevisiae, GI6323504, Length=371, Percent_Identity=30.7277628032345, Blast_Score=136, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 37214; Mature: 37083

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSMQHNRRFLLASRPHGEPTADNFRLEKVATPQPAAGQVLLRTVYLSLDPYMRGRMSD
CCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHCCCCC
APSYAPPVEIGEVMVGGTVSRVVTSQHPDFKAGDWVLGYDGWQDYALSDGSGLRNLGPDQ
CCCCCCCHHHCCEEECCHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
KHPSRLLGVLGMPGFTAYMGLLDIGQPKPGETLVVAAASGAVGSVVGQVAKLKGCRVVGV
CCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEE
AGGKEKCRYVVEELGFDACVDHRAPDFAEQLAAACPQGIDIYYENVGGAVFDAVIPLLNT
CCCHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCC
QARIPVCGIIAHYNATDLPAGPDRLPMLQGLILRKRIRMQGFIIFDDYAEGFGEFLQHMG
CCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHH
EWVEQGKIKFREDLVDGLENAPQALIGLLHGKNFGKLVIRVGDE
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
>Mature Secondary Structure 
SQSMQHNRRFLLASRPHGEPTADNFRLEKVATPQPAAGQVLLRTVYLSLDPYMRGRMSD
CCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHCCCCC
APSYAPPVEIGEVMVGGTVSRVVTSQHPDFKAGDWVLGYDGWQDYALSDGSGLRNLGPDQ
CCCCCCCHHHCCEEECCHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
KHPSRLLGVLGMPGFTAYMGLLDIGQPKPGETLVVAAASGAVGSVVGQVAKLKGCRVVGV
CCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEE
AGGKEKCRYVVEELGFDACVDHRAPDFAEQLAAACPQGIDIYYENVGGAVFDAVIPLLNT
CCCHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCC
QARIPVCGIIAHYNATDLPAGPDRLPMLQGLILRKRIRMQGFIIFDDYAEGFGEFLQHMG
CCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHH
EWVEQGKIKFREDLVDGLENAPQALIGLLHGKNFGKLVIRVGDE
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]