Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

Click here to switch to the map view.

The map label for this gene is 157371214

Identifier: 157371214

GI number: 157371214

Start: 3271237

End: 3271539

Strand: Direct

Name: 157371214

Synonym: Spro_2974

Alternate gene names: NA

Gene position: 3271237-3271539 (Clockwise)

Preceding gene: 157371213

Following gene: 157371230

Centisome position: 60.04

GC content: 55.78

Gene sequence:

>303_bases
ATGAGCAAGATCCTTGCTGAGATCCATCAGGAAGTCCAAGAACTGCATCAGGCAGGATTTGTTGATGCCAGCACCATGCG
CACCTTCGACATGCTGTGTTTACGCCCGGTCAAACAATATACTCCAGCGGACATCCGCGCCCTGCGCGAGCGTGAAAACG
TCAGCCAGCCGGTGTTTGCCTTGCATCTAAACGTCAGCAAAAAGGCAGTGCAAAAATGGGAGCGTGGCGAAGCCGTGCCC
AACTCCGCCGCCATGAAGCTTCTTTCGCTGGTCGATCGCAACGGTCTGGCGATCCTGGCCTAG

Upstream 100 bases:

>100_bases
CCTGAGGGGGAGTGAATGATCGATATCTACCTTTATCTGGACTATTCGCCTTTCAGGCTTTATCAGTTGGTTAATGACAA
GAGGTTGAGGAGACTGACCT

Downstream 100 bases:

>100_bases
ACCGTTACTGGTAATTGACAATCACCTGATTGCTGATCACCCGCAGCGGCGGGTTCAAACTGCCGCGCGCCTGCACATAG
TAGACAAAACGCAGCTCGGC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; Cro/CI Family Transcriptional Regulator-Related Protein; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Transcriptional Regulator; Transcriptional Regulator-Like Protein; Helix-Turn-Helix Protein; Transcriptional Regulator Protein; HTH-Type Transcriptional Regulatory Protein; Transcriptional Regulator-Like; Helix-Turn-Helix Family Protein

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MSKILAEIHQEVQELHQAGFVDASTMRTFDMLCLRPVKQYTPADIRALRERENVSQPVFALHLNVSKKAVQKWERGEAVP
NSAAMKLLSLVDRNGLAILA

Sequences:

>Translated_100_residues
MSKILAEIHQEVQELHQAGFVDASTMRTFDMLCLRPVKQYTPADIRALRERENVSQPVFALHLNVSKKAVQKWERGEAVP
NSAAMKLLSLVDRNGLAILA
>Mature_99_residues
SKILAEIHQEVQELHQAGFVDASTMRTFDMLCLRPVKQYTPADIRALRERENVSQPVFALHLNVSKKAVQKWERGEAVPN
SAAMKLLSLVDRNGLAILA

Specific function: Unknown

COG id: COG2944

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11241; Mature: 11110

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKILAEIHQEVQELHQAGFVDASTMRTFDMLCLRPVKQYTPADIRALRERENVSQPVFA
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEE
LHLNVSKKAVQKWERGEAVPNSAAMKLLSLVDRNGLAILA
EEECCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEC
>Mature Secondary Structure 
SKILAEIHQEVQELHQAGFVDASTMRTFDMLCLRPVKQYTPADIRALRERENVSQPVFA
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEE
LHLNVSKKAVQKWERGEAVPNSAAMKLLSLVDRNGLAILA
EEECCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA