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The map label for this gene is ynfE [H]

Identifier: 157371162

GI number: 157371162

Start: 3216919

End: 3219252

Strand: Direct

Name: ynfE [H]

Synonym: Spro_2922

Alternate gene names: 157371162

Gene position: 3216919-3219252 (Clockwise)

Preceding gene: 157371160

Following gene: 157371163

Centisome position: 59.04

GC content: 53.34

Gene sequence:

>2334_bases
ATGAAAAACATATCAGATATCAGATTGAATCGCAGAACCTTGTTAAAAGGACTGGGAGTTATTGGCTTGGCCAGCATCTC
ACCCTGCATATTTTCCATGGCCCTGGATAATGGCAAACCCTTACCCCGAGTGCGGCTTAAACTAACCGACTATCAAACCT
TTAAGTCAACCTGTGCGATGGAATGTCTGCACTGTAATTTGACGGCTTACGTCTATCAGGGTGAACTCAAGAAAATAGAG
GCCAGCAAAGGCTTTAACGTCAAGTGCTGCTTGCGCGGTATTAGCCGGACCAAATGGGTATCTCACCCACTGCGGGTTAA
AACGCCTTTGCTTCGGGCCGGGGAAAAGGGCGAAGGGAAATTCAACCCCATATCCTGGGATGAAGCGTTGGATCTGATTG
AGCTAAATATCCGTAACACCATTGCCAGCCACGGGAATAAAGGCCTGTTGATTTCAACCAGCTCCGGCAATATGGATTCG
ATTAAAAACGATATGGCCAAGGCCTTTTTTGATTACCTCGGTGGGGCCACCCAACGTGCAGGCTCTTTGTGTTGCTCTGC
GGTCACCGCCGCCATGATACCGATGCTTGGCCTGCGCTATGCGGATATGCGCGACACCATTAGCGATAGCCGCTATATCC
TGTGCTGGGGCAATAACCCGGCGGTGACCATGCAGGCCTATTTTAAAGAATATATTAAGGCGCAGAATCGGGGGGCACGC
CTGATAGTGATCGATCCTCGATTTAACGAAACTGCAGCCAAAGCCGATGAATGGATCCCGATTGTGCCTGGCACGGACAT
CGCGTTGGCGCTGGGGATGATTAAAATCATTATCGATGAGCGGCGCTATGATGCCGACTTTCTGCGTCAACATACCGGGG
CGGTTTATCTGGTCGATACCCAGCAAAAACAACTTAGGGAAAACCCACAGGATCAAGAAAGCTATCTGGTCTACGACATC
CTGAGCCGGCGCCTGGTGCGTCATGATACGCCCGCCATTGTTGCGGCACTGACGCAGGCAGAACTGCCTGCTGATGCCAC
TTTTAGCACGGTGTTTGAATTGATCCGCCAGCAAGCAGCCCCCTGGAGTCCTGAAAAAGTAACGGCGGAGACCGATGTTC
CGCAGGCCACGCTGCTGCGTTTGGCGCGGGAATATGCCAGCAATAAGCCTTCAATGATCGTACAGAATATGTCCGGCGCT
CAGCGCACCGAGTTTGGCACCTATGTGGCCGCCAGCCAGTTCTATCTGGCGCTGCTGACCGGCAATATGGGCAAAGCCGG
TGGCGGTGTCTGTGATGCCGGCGGCGCAAGACAGATGATGAAGTTCAATCCGCCAGTGCCAGCGGCACCCAAGGTAGAAA
AAATCCCGCCGATACCGGTGTCCAAAACCGGTGAATGGATCGTCAACGATCGCCCTCACCCAATTAACTTCTGGTGGATT
ATGACTCTGGGGGCCCTGACCCAGCTACCCAATACCAATATGGTCAAGAAGGCATTGAAGAAAGTGCCCTTTGTGGTGGT
GGCCGATAACCTGATGAGCTCCACCGCCTTGTATGCAGACCTGGTGCTGCCGGTGACCACCATCTTTGAAGATCTCAGCC
TGATGGCCAGCGTTCGCAGCCATTACGTGCAACTGATGGAAAAAGCGGTAGAACCGGTGGGCGAAGCAAAAGCGGATTAC
TGGATTTTTGCCCGGCTGGCCGAACGTTTCGGCTTTGGCGAAGTGTTTAATCAACCGATTGAACACTATATCGAAAACTG
CCTGGCCGGTACCGGCATCACGATTGAACAACTGCGCCAGGGGCCAGTCAAGCCGGTTCCAGTGCCGTGGATCCCGTTCA
AAGATGGCATCTTCCGCACGCCGACTAAAAAAGCCCACCTGTTTATTGAAGCCTGGCAGAAGAAGGACTTCCCGCCGATT
GTCACCTATATGCAGGTTAAAGAATCGCCCAAAGGCTCTCCCGAACTGGCGAGAAAATATCCGTTAATGGCCGTGCAGCG
CAAGCTGGCCCGCAGTATTCATTCCAGCCACGGCATGAATGAATGGATCCTCGAGGTGCAGCGCAATCAGCCCAATATCA
TGATCCACCCGGATGATGCCGCCAGCCGCAATATCCAGAACGGCGCATGGGCCATTGCTTTCAATCACCGTGGCGAACAC
CGGGCATTGGCAGTGGTGACCCGCCAAATCAAACGCGGCGTGGTGTGTCTGGATAACGGTTGGTGGGAACAGCAAGGGGG
CAGCAGCAGCCATGTGACTAACGATCATGTGGAGGTTCTGGGCACCGGCCATTGTTGTAACAGCACCCTGGTTGACGTTA
GAGCGGAGGCATAA

Upstream 100 bases:

>100_bases
GTGCATCATAATCTCCCCATGTTTAACTCAGGGTGTTATTTAAAATAAATAACAACACCACGAACAATAATAAAAACAAA
TAATACGTGCGGGAAACATC

Downstream 100 bases:

>100_bases
TCATGGTCAGACAATATGGTTTCTTGGTTGATATGCGTGGCTGTTACGGCTGTAAAACCTGCTCAATGGCCTGCAAATCC
GAAAATGCCACTCCGGCGGG

Product: molybdopterin oxidoreductase

Products: NA

Alternate protein names: DMSO reductase [H]

Number of amino acids: Translated: 777; Mature: 777

Protein sequence:

>777_residues
MKNISDIRLNRRTLLKGLGVIGLASISPCIFSMALDNGKPLPRVRLKLTDYQTFKSTCAMECLHCNLTAYVYQGELKKIE
ASKGFNVKCCLRGISRTKWVSHPLRVKTPLLRAGEKGEGKFNPISWDEALDLIELNIRNTIASHGNKGLLISTSSGNMDS
IKNDMAKAFFDYLGGATQRAGSLCCSAVTAAMIPMLGLRYADMRDTISDSRYILCWGNNPAVTMQAYFKEYIKAQNRGAR
LIVIDPRFNETAAKADEWIPIVPGTDIALALGMIKIIIDERRYDADFLRQHTGAVYLVDTQQKQLRENPQDQESYLVYDI
LSRRLVRHDTPAIVAALTQAELPADATFSTVFELIRQQAAPWSPEKVTAETDVPQATLLRLAREYASNKPSMIVQNMSGA
QRTEFGTYVAASQFYLALLTGNMGKAGGGVCDAGGARQMMKFNPPVPAAPKVEKIPPIPVSKTGEWIVNDRPHPINFWWI
MTLGALTQLPNTNMVKKALKKVPFVVVADNLMSSTALYADLVLPVTTIFEDLSLMASVRSHYVQLMEKAVEPVGEAKADY
WIFARLAERFGFGEVFNQPIEHYIENCLAGTGITIEQLRQGPVKPVPVPWIPFKDGIFRTPTKKAHLFIEAWQKKDFPPI
VTYMQVKESPKGSPELARKYPLMAVQRKLARSIHSSHGMNEWILEVQRNQPNIMIHPDDAASRNIQNGAWAIAFNHRGEH
RALAVVTRQIKRGVVCLDNGWWEQQGGSSSHVTNDHVEVLGTGHCCNSTLVDVRAEA

Sequences:

>Translated_777_residues
MKNISDIRLNRRTLLKGLGVIGLASISPCIFSMALDNGKPLPRVRLKLTDYQTFKSTCAMECLHCNLTAYVYQGELKKIE
ASKGFNVKCCLRGISRTKWVSHPLRVKTPLLRAGEKGEGKFNPISWDEALDLIELNIRNTIASHGNKGLLISTSSGNMDS
IKNDMAKAFFDYLGGATQRAGSLCCSAVTAAMIPMLGLRYADMRDTISDSRYILCWGNNPAVTMQAYFKEYIKAQNRGAR
LIVIDPRFNETAAKADEWIPIVPGTDIALALGMIKIIIDERRYDADFLRQHTGAVYLVDTQQKQLRENPQDQESYLVYDI
LSRRLVRHDTPAIVAALTQAELPADATFSTVFELIRQQAAPWSPEKVTAETDVPQATLLRLAREYASNKPSMIVQNMSGA
QRTEFGTYVAASQFYLALLTGNMGKAGGGVCDAGGARQMMKFNPPVPAAPKVEKIPPIPVSKTGEWIVNDRPHPINFWWI
MTLGALTQLPNTNMVKKALKKVPFVVVADNLMSSTALYADLVLPVTTIFEDLSLMASVRSHYVQLMEKAVEPVGEAKADY
WIFARLAERFGFGEVFNQPIEHYIENCLAGTGITIEQLRQGPVKPVPVPWIPFKDGIFRTPTKKAHLFIEAWQKKDFPPI
VTYMQVKESPKGSPELARKYPLMAVQRKLARSIHSSHGMNEWILEVQRNQPNIMIHPDDAASRNIQNGAWAIAFNHRGEH
RALAVVTRQIKRGVVCLDNGWWEQQGGSSSHVTNDHVEVLGTGHCCNSTLVDVRAEA
>Mature_777_residues
MKNISDIRLNRRTLLKGLGVIGLASISPCIFSMALDNGKPLPRVRLKLTDYQTFKSTCAMECLHCNLTAYVYQGELKKIE
ASKGFNVKCCLRGISRTKWVSHPLRVKTPLLRAGEKGEGKFNPISWDEALDLIELNIRNTIASHGNKGLLISTSSGNMDS
IKNDMAKAFFDYLGGATQRAGSLCCSAVTAAMIPMLGLRYADMRDTISDSRYILCWGNNPAVTMQAYFKEYIKAQNRGAR
LIVIDPRFNETAAKADEWIPIVPGTDIALALGMIKIIIDERRYDADFLRQHTGAVYLVDTQQKQLRENPQDQESYLVYDI
LSRRLVRHDTPAIVAALTQAELPADATFSTVFELIRQQAAPWSPEKVTAETDVPQATLLRLAREYASNKPSMIVQNMSGA
QRTEFGTYVAASQFYLALLTGNMGKAGGGVCDAGGARQMMKFNPPVPAAPKVEKIPPIPVSKTGEWIVNDRPHPINFWWI
MTLGALTQLPNTNMVKKALKKVPFVVVADNLMSSTALYADLVLPVTTIFEDLSLMASVRSHYVQLMEKAVEPVGEAKADY
WIFARLAERFGFGEVFNQPIEHYIENCLAGTGITIEQLRQGPVKPVPVPWIPFKDGIFRTPTKKAHLFIEAWQKKDFPPI
VTYMQVKESPKGSPELARKYPLMAVQRKLARSIHSSHGMNEWILEVQRNQPNIMIHPDDAASRNIQNGAWAIAFNHRGEH
RALAVVTRQIKRGVVCLDNGWWEQQGGSSSHVTNDHVEVLGTGHCCNSTLVDVRAEA

Specific function: Terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787870, Length=849, Percent_Identity=27.0906949352179, Blast_Score=228, Evalue=9e-61,
Organism=Escherichia coli, GI87081797, Length=849, Percent_Identity=26.9729093050648, Blast_Score=222, Evalue=7e-59,
Organism=Escherichia coli, GI171474008, Length=847, Percent_Identity=27.3907910271547, Blast_Score=219, Evalue=5e-58,
Organism=Escherichia coli, GI87081994, Length=741, Percent_Identity=24.5614035087719, Blast_Score=131, Evalue=1e-31,
Organism=Escherichia coli, GI145693196, Length=722, Percent_Identity=24.3767313019391, Blast_Score=128, Evalue=2e-30,
Organism=Escherichia coli, GI3868721, Length=737, Percent_Identity=23.8805970149254, Blast_Score=127, Evalue=3e-30,
Organism=Escherichia coli, GI3868720, Length=461, Percent_Identity=24.5119305856833, Blast_Score=97, Evalue=6e-21,
Organism=Escherichia coli, GI3868719, Length=420, Percent_Identity=24.5238095238095, Blast_Score=90, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011888
- InterPro:   IPR009010
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR006963
- InterPro:   IPR006655
- InterPro:   IPR006311 [H]

Pfam domain/function: PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: 1.8.99.- [C]

Molecular weight: Translated: 86508; Mature: 86508

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: PS00490 MOLYBDOPTERIN_PROK_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNISDIRLNRRTLLKGLGVIGLASISPCIFSMALDNGKPLPRVRLKLTDYQTFKSTCAM
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHH
ECLHCNLTAYVYQGELKKIEASKGFNVKCCLRGISRTKWVSHPLRVKTPLLRAGEKGEGK
HHHHCCEEEEEEECCHHEECCCCCCCHHHHHHHCHHHHHHCCCCCCCCHHHHCCCCCCCC
FNPISWDEALDLIELNIRNTIASHGNKGLLISTSSGNMDSIKNDMAKAFFDYLGGATQRA
CCCCCHHHHHHHHEEHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHH
GSLCCSAVTAAMIPMLGLRYADMRDTISDSRYILCWGNNPAVTMQAYFKEYIKAQNRGAR
HHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCCCEEHHHHHHHHHHHCCCCCE
LIVIDPRFNETAAKADEWIPIVPGTDIALALGMIKIIIDERRYDADFLRQHTGAVYLVDT
EEEECCCCCCHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEEEEC
QQKQLRENPQDQESYLVYDILSRRLVRHDTPAIVAALTQAELPADATFSTVFELIRQQAA
CHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
PWSPEKVTAETDVPQATLLRLAREYASNKPSMIVQNMSGAQRTEFGTYVAASQFYLALLT
CCCCCCEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHEEEEEE
GNMGKAGGGVCDAGGARQMMKFNPPVPAAPKVEKIPPIPVSKTGEWIVNDRPHPINFWWI
CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEHH
MTLGALTQLPNTNMVKKALKKVPFVVVADNLMSSTALYADLVLPVTTIFEDLSLMASVRS
HHHHHHHCCCCCHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HYVQLMEKAVEPVGEAKADYWIFARLAERFGFGEVFNQPIEHYIENCLAGTGITIEQLRQ
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHC
GPVKPVPVPWIPFKDGIFRTPTKKAHLFIEAWQKKDFPPIVTYMQVKESPKGSPELARKY
CCCCCCCCCCCCCCCCCCCCCCCHHEEEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHC
PLMAVQRKLARSIHSSHGMNEWILEVQRNQPNIMIHPDDAASRNIQNGAWAIAFNHRGEH
CHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCEEECCCCHHHCCCCCCEEEEEECCCCCC
RALAVVTRQIKRGVVCLDNGWWEQQGGSSSHVTNDHVEVLGTGHCCNSTLVDVRAEA
HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECC
>Mature Secondary Structure
MKNISDIRLNRRTLLKGLGVIGLASISPCIFSMALDNGKPLPRVRLKLTDYQTFKSTCAM
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHH
ECLHCNLTAYVYQGELKKIEASKGFNVKCCLRGISRTKWVSHPLRVKTPLLRAGEKGEGK
HHHHCCEEEEEEECCHHEECCCCCCCHHHHHHHCHHHHHHCCCCCCCCHHHHCCCCCCCC
FNPISWDEALDLIELNIRNTIASHGNKGLLISTSSGNMDSIKNDMAKAFFDYLGGATQRA
CCCCCHHHHHHHHEEHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHH
GSLCCSAVTAAMIPMLGLRYADMRDTISDSRYILCWGNNPAVTMQAYFKEYIKAQNRGAR
HHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCCCEEHHHHHHHHHHHCCCCCE
LIVIDPRFNETAAKADEWIPIVPGTDIALALGMIKIIIDERRYDADFLRQHTGAVYLVDT
EEEECCCCCCHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEEEEC
QQKQLRENPQDQESYLVYDILSRRLVRHDTPAIVAALTQAELPADATFSTVFELIRQQAA
CHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
PWSPEKVTAETDVPQATLLRLAREYASNKPSMIVQNMSGAQRTEFGTYVAASQFYLALLT
CCCCCCEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHEEEEEE
GNMGKAGGGVCDAGGARQMMKFNPPVPAAPKVEKIPPIPVSKTGEWIVNDRPHPINFWWI
CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEHH
MTLGALTQLPNTNMVKKALKKVPFVVVADNLMSSTALYADLVLPVTTIFEDLSLMASVRS
HHHHHHHCCCCCHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HYVQLMEKAVEPVGEAKADYWIFARLAERFGFGEVFNQPIEHYIENCLAGTGITIEQLRQ
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHC
GPVKPVPVPWIPFKDGIFRTPTKKAHLFIEAWQKKDFPPIVTYMQVKESPKGSPELARKY
CCCCCCCCCCCCCCCCCCCCCCCHHEEEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHC
PLMAVQRKLARSIHSSHGMNEWILEVQRNQPNIMIHPDDAASRNIQNGAWAIAFNHRGEH
CHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCEEECCCCHHHCCCCCCEEEEEECCCCCC
RALAVVTRQIKRGVVCLDNGWWEQQGGSSSHVTNDHVEVLGTGHCCNSTLVDVRAEA
HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: May Bind 4Fe-4S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]