| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is nrtA [H]
Identifier: 157371149
GI number: 157371149
Start: 3200876
End: 3202135
Strand: Reverse
Name: nrtA [H]
Synonym: Spro_2909
Alternate gene names: 157371149
Gene position: 3202135-3200876 (Counterclockwise)
Preceding gene: 157371150
Following gene: 157371148
Centisome position: 58.77
GC content: 59.05
Gene sequence:
>1260_bases ATGACGCACACCAAACCCTCCGGACTTAGCCTGACGCGCCGCCGTTTTTTGGCCGGTAGTGCGGCGTTGGGCGGCAGCAT GATGTTGCCCGGCCTGATGAACGCCGCCTGGGCGGCAGGCTCTGACGCCCCGGAGAAAAAAGAGATTCGCGTGGGCTTTA TTCCACTTACCGATTGCGCTTCGGTGGTGATGGCGGCGGTGAAACAGTTCGATCAGAAGTACGGCATCAAAATTATCCCC AGCAAGGAGGCCAGTTGGGCGGCAGTACGCGACAAACTTTTGTCCGGTGAACTGGATGCGGCGCACGTACTGTACGGCAT GGTGTATGGCCTGCAGCTTGGCGTCGCCGGACCGCAGCAGGATATGGCGGTGTTGATGACGCTCAACAACAACGGTCAGG CGATTACGCTCTCCAACCAGTTAAAGCAGGCCGGTGTCACCGATGCTGCGAGCTTGAAAAAAACCGTCGATGCCAGCGCC AAAGGCACCTATACCTTCGCCCAAACCTTCCCGACCGGCACCCACGCCATGTGGCTGTATTACTGGCTGGCTAACGCCGG AATTCACCCGTTTGACGACGTGCGCAATGTGGTGGTGCCGCCGCCGCAGATGGTGATGAACATGAAAATCGGCAACATGA GCGGTTTTTGCGTGGGTGAGCCGTGGAACCAACGTGCAATTGCGGAAGACATTGGTTTTACCGCCGTGACCAGTCAGGAG ATTTGGCCCGATCACCCGGAAAAGGTGCTGGGTACCACCGGCAACTGGGTGACGGCCAACCCTAATAGCGCCCGTGCGCT GACCGCTGCGGTACTGGACGCCGCACGCTGGATCGACAGTTCGGACGCCAACCGACAGGAAACCGCTCAGGTGGTGGCGG GGCGCGCCTATATCAACACCAGGCCGGAAATCATTACCGGCCGCATGCTCGGCCAATACCAGAGCGGTCTGGGCAAGTCG TGGCAGGACTCACATGCGATGCGTTTTTTCCACGATGGCGAGGTGAGCTACCCCTACCTGTCCGACGGCATGTGGTTCCT GACCCAGCATCGCCGCTGGGGCTTGTTGAATGCCGAACCGGACTATCTGGCCGTCGCGAAGAAAATCAACCGTATCGAAA TCTATAAGCAGGCGGCCAGCGCGGTGGGTGGAGTAAACCTTCCCGGCAGCGATATGCGTACCAGCACGCTGTTAGACGGC AAGCGCTGGGACGGCAGCAATCCGGCGGAATACGCCAACAGTTTCACTTTAAAGCGTTGA
Upstream 100 bases:
>100_bases GATTATGGATAAAGGCGTCCTTTCAGCATGTTCACCCCAACGGTGGAATGTGCTGATGGGACGCCTTTTTTATTTTATCG CCTGATTGAAGGAATTGCCG
Downstream 100 bases:
>100_bases GGTCACCAATGAAAAATCTTGCTGAACGGATCTATATTCCTGCGTCATCGCGGGCAGAAGTCAGTGCGGAAATCGTGCCG CTAAAGCGCCCGGTAATGCC
Product: nitrate-binding proteint
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MTHTKPSGLSLTRRRFLAGSAALGGSMMLPGLMNAAWAAGSDAPEKKEIRVGFIPLTDCASVVMAAVKQFDQKYGIKIIP SKEASWAAVRDKLLSGELDAAHVLYGMVYGLQLGVAGPQQDMAVLMTLNNNGQAITLSNQLKQAGVTDAASLKKTVDASA KGTYTFAQTFPTGTHAMWLYYWLANAGIHPFDDVRNVVVPPPQMVMNMKIGNMSGFCVGEPWNQRAIAEDIGFTAVTSQE IWPDHPEKVLGTTGNWVTANPNSARALTAAVLDAARWIDSSDANRQETAQVVAGRAYINTRPEIITGRMLGQYQSGLGKS WQDSHAMRFFHDGEVSYPYLSDGMWFLTQHRRWGLLNAEPDYLAVAKKINRIEIYKQAASAVGGVNLPGSDMRTSTLLDG KRWDGSNPAEYANSFTLKR
Sequences:
>Translated_419_residues MTHTKPSGLSLTRRRFLAGSAALGGSMMLPGLMNAAWAAGSDAPEKKEIRVGFIPLTDCASVVMAAVKQFDQKYGIKIIP SKEASWAAVRDKLLSGELDAAHVLYGMVYGLQLGVAGPQQDMAVLMTLNNNGQAITLSNQLKQAGVTDAASLKKTVDASA KGTYTFAQTFPTGTHAMWLYYWLANAGIHPFDDVRNVVVPPPQMVMNMKIGNMSGFCVGEPWNQRAIAEDIGFTAVTSQE IWPDHPEKVLGTTGNWVTANPNSARALTAAVLDAARWIDSSDANRQETAQVVAGRAYINTRPEIITGRMLGQYQSGLGKS WQDSHAMRFFHDGEVSYPYLSDGMWFLTQHRRWGLLNAEPDYLAVAKKINRIEIYKQAASAVGGVNLPGSDMRTSTLLDG KRWDGSNPAEYANSFTLKR >Mature_418_residues THTKPSGLSLTRRRFLAGSAALGGSMMLPGLMNAAWAAGSDAPEKKEIRVGFIPLTDCASVVMAAVKQFDQKYGIKIIPS KEASWAAVRDKLLSGELDAAHVLYGMVYGLQLGVAGPQQDMAVLMTLNNNGQAITLSNQLKQAGVTDAASLKKTVDASAK GTYTFAQTFPTGTHAMWLYYWLANAGIHPFDDVRNVVVPPPQMVMNMKIGNMSGFCVGEPWNQRAIAEDIGFTAVTSQEI WPDHPEKVLGTTGNWVTANPNSARALTAAVLDAARWIDSSDANRQETAQVVAGRAYINTRPEIITGRMLGQYQSGLGKSW QDSHAMRFFHDGEVSYPYLSDGMWFLTQHRRWGLLNAEPDYLAVAKKINRIEIYKQAASAVGGVNLPGSDMRTSTLLDGK RWDGSNPAEYANSFTLKR
Specific function: Essential component of the nitrate-transporting system. May be the substrate-binding protein [H]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CmpA/NrtA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006311 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45636; Mature: 45505
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHTKPSGLSLTRRRFLAGSAALGGSMMLPGLMNAAWAAGSDAPEKKEIRVGFIPLTDCA CCCCCCCCCHHHHHHHHHCCHHCCCCHHCCHHHHHHHCCCCCCCCCCCEEEEEEEHHHHH SVVMAAVKQFDQKYGIKIIPSKEASWAAVRDKLLSGELDAAHVLYGMVYGLQLGVAGPQQ HHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC DMAVLMTLNNNGQAITLSNQLKQAGVTDAASLKKTVDASAKGTYTFAQTFPTGTHAMWLY CEEEEEEECCCCCEEEEHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHH YWLANAGIHPFDDVRNVVVPPPQMVMNMKIGNMSGFCVGEPWNQRAIAEDIGFTAVTSQE HHHHHCCCCCHHHCCCCCCCCHHHEEEEEECCCCCEEECCCCCCCHHHHHCCCEEEECCC IWPDHPEKVLGTTGNWVTANPNSARALTAAVLDAARWIDSSDANRQETAQVVAGRAYINT CCCCCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEECC RPEIITGRMLGQYQSGLGKSWQDSHAMRFFHDGEVSYPYLSDGMWFLTQHRRWGLLNAEP CCCEEEHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCC DYLAVAKKINRIEIYKQAASAVGGVNLPGSDMRTSTLLDGKRWDGSNPAEYANSFTLKR CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHCCCCCCC >Mature Secondary Structure THTKPSGLSLTRRRFLAGSAALGGSMMLPGLMNAAWAAGSDAPEKKEIRVGFIPLTDCA CCCCCCCCHHHHHHHHHCCHHCCCCHHCCHHHHHHHCCCCCCCCCCCEEEEEEEHHHHH SVVMAAVKQFDQKYGIKIIPSKEASWAAVRDKLLSGELDAAHVLYGMVYGLQLGVAGPQQ HHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC DMAVLMTLNNNGQAITLSNQLKQAGVTDAASLKKTVDASAKGTYTFAQTFPTGTHAMWLY CEEEEEEECCCCCEEEEHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHH YWLANAGIHPFDDVRNVVVPPPQMVMNMKIGNMSGFCVGEPWNQRAIAEDIGFTAVTSQE HHHHHCCCCCHHHCCCCCCCCHHHEEEEEECCCCCEEECCCCCCCHHHHHCCCEEEECCC IWPDHPEKVLGTTGNWVTANPNSARALTAAVLDAARWIDSSDANRQETAQVVAGRAYINT CCCCCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEECC RPEIITGRMLGQYQSGLGKSWQDSHAMRFFHDGEVSYPYLSDGMWFLTQHRRWGLLNAEP CCCEEEHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCC DYLAVAKKINRIEIYKQAASAVGGVNLPGSDMRTSTLLDGKRWDGSNPAEYANSFTLKR CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]