| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is nrtB [H]
Identifier: 157371148
GI number: 157371148
Start: 3199971
End: 3200867
Strand: Reverse
Name: nrtB [H]
Synonym: Spro_2908
Alternate gene names: 157371148
Gene position: 3200867-3199971 (Counterclockwise)
Preceding gene: 157371149
Following gene: 157371147
Centisome position: 58.74
GC content: 58.97
Gene sequence:
>897_bases ATGAAAAATCTTGCTGAACGGATCTATATTCCTGCGTCATCGCGGGCAGAAGTCAGTGCGGAAATCGTGCCGCTAAAGCG CCCGGTAATGCCACTGCCGCAGCGCAAAGCCCGCTGGGGTTTGCTGTTACAGCAGGGTTTCCGCCGTGGCGTGCCCGCCG CGTTGGGATTGGTGCTGACCCTGGTGGTCTGGCAGGTTGCGGCGCTTAACAGCAAGGGTTTCCCTACGCCATGGGCCACC TGGCAGGCGGCACTGGTGCTGTTTGCCGACCCATTTTATTCCGCCGGGCCGAACGATCAGGGCATTGGCTGGAACGTACT GGCTTCGCTGCAGCGTGTGGCGACCGGTTTTGGGCTGGCGGCGCTGGTCGGTATTCCGGCCGGTTTTCTGCTGGGGCGCT TTGCGTTTCTGGCCAACATGCTCAACCCGATCATTTCACTGCTGCGCCCGGTCAGTCCGCTGGCCTGGTTGCCGATTGGT CTGCTGCTGTTCCAGCGGGCGGAGCCTGCTTCAACCTGGACCATTTTCATCTGTTCCATCTGGCCGATGATCCTCAACAC CGCCGAGGGTGTCACGCGTATTCCGCAGGATTACCTCAACGTGGCGCGGGTGCTCAAGCTGTCGGAGTGGACGGTAATGC GCAAAATCCTGTTCCCGGCGGTGCTGCCTTATGTGCTGACCGGTGTTCGCCTGTCGATTGGCATCGCCTGGCTGGTGATT GTGGCGGCGGAAATGCTGACCGGCGGCGTTGGCATCGGTTTTTGGATCTGGAATGAGTGGAACAACCTCAACGTCGAAAA CATCATTATTGCCATCATCGTGATCGGTGTGGTCGGGCTGCTGCTCGAACAGGGACTGATGTTACTGGCAAAACGTTTTA GTTATCCGAACCGCTAG
Upstream 100 bases:
>100_bases GCGATATGCGTACCAGCACGCTGTTAGACGGCAAGCGCTGGGACGGCAGCAATCCGGCGGAATACGCCAACAGTTTCACT TTAAAGCGTTGAGGTCACCA
Downstream 100 bases:
>100_bases GAGTACGCCATGAAACCGATTATTCAGGTCCAGAACGTCAGCCAGCGTTTTGCCACCCCGCAGGGGGAGTTTATTGCGCT GGATCGGGTGAGTTTTGATA
Product: nitrate ABC transporter inner membrane subunit
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MKNLAERIYIPASSRAEVSAEIVPLKRPVMPLPQRKARWGLLLQQGFRRGVPAALGLVLTLVVWQVAALNSKGFPTPWAT WQAALVLFADPFYSAGPNDQGIGWNVLASLQRVATGFGLAALVGIPAGFLLGRFAFLANMLNPIISLLRPVSPLAWLPIG LLLFQRAEPASTWTIFICSIWPMILNTAEGVTRIPQDYLNVARVLKLSEWTVMRKILFPAVLPYVLTGVRLSIGIAWLVI VAAEMLTGGVGIGFWIWNEWNNLNVENIIIAIIVIGVVGLLLEQGLMLLAKRFSYPNR
Sequences:
>Translated_298_residues MKNLAERIYIPASSRAEVSAEIVPLKRPVMPLPQRKARWGLLLQQGFRRGVPAALGLVLTLVVWQVAALNSKGFPTPWAT WQAALVLFADPFYSAGPNDQGIGWNVLASLQRVATGFGLAALVGIPAGFLLGRFAFLANMLNPIISLLRPVSPLAWLPIG LLLFQRAEPASTWTIFICSIWPMILNTAEGVTRIPQDYLNVARVLKLSEWTVMRKILFPAVLPYVLTGVRLSIGIAWLVI VAAEMLTGGVGIGFWIWNEWNNLNVENIIIAIIVIGVVGLLLEQGLMLLAKRFSYPNR >Mature_298_residues MKNLAERIYIPASSRAEVSAEIVPLKRPVMPLPQRKARWGLLLQQGFRRGVPAALGLVLTLVVWQVAALNSKGFPTPWAT WQAALVLFADPFYSAGPNDQGIGWNVLASLQRVATGFGLAALVGIPAGFLLGRFAFLANMLNPIISLLRPVSPLAWLPIG LLLFQRAEPASTWTIFICSIWPMILNTAEGVTRIPQDYLNVARVLKLSEWTVMRKILFPAVLPYVLTGVRLSIGIAWLVI VAAEMLTGGVGIGFWIWNEWNNLNVENIIIAIIVIGVVGLLLEQGLMLLAKRFSYPNR
Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=203, Percent_Identity=32.512315270936, Blast_Score=98, Evalue=5e-22, Organism=Escherichia coli, GI87081802, Length=153, Percent_Identity=28.7581699346405, Blast_Score=76, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005889 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32783; Mature: 32783
Theoretical pI: Translated: 10.96; Mature: 10.96
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLAERIYIPASSRAEVSAEIVPLKRPVMPLPQRKARWGLLLQQGFRRGVPAALGLVLT CCCHHHHEECCCCCCCCCHHEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH LVVWQVAALNSKGFPTPWATWQAALVLFADPFYSAGPNDQGIGWNVLASLQRVATGFGLA HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ALVGIPAGFLLGRFAFLANMLNPIISLLRPVSPLAWLPIGLLLFQRAEPASTWTIFICSI HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH WPMILNTAEGVTRIPQDYLNVARVLKLSEWTVMRKILFPAVLPYVLTGVRLSIGIAWLVI HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAAEMLTGGVGIGFWIWNEWNNLNVENIIIAIIVIGVVGLLLEQGLMLLAKRFSYPNR HHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKNLAERIYIPASSRAEVSAEIVPLKRPVMPLPQRKARWGLLLQQGFRRGVPAALGLVLT CCCHHHHEECCCCCCCCCHHEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH LVVWQVAALNSKGFPTPWATWQAALVLFADPFYSAGPNDQGIGWNVLASLQRVATGFGLA HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ALVGIPAGFLLGRFAFLANMLNPIISLLRPVSPLAWLPIGLLLFQRAEPASTWTIFICSI HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH WPMILNTAEGVTRIPQDYLNVARVLKLSEWTVMRKILFPAVLPYVLTGVRLSIGIAWLVI HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAAEMLTGGVGIGFWIWNEWNNLNVENIIIAIIVIGVVGLLLEQGLMLLAKRFSYPNR HHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7647306 [H]