| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yfiH [C]
Identifier: 157371061
GI number: 157371061
Start: 3102165
End: 3102881
Strand: Direct
Name: yfiH [C]
Synonym: Spro_2821
Alternate gene names: 157371061
Gene position: 3102165-3102881 (Clockwise)
Preceding gene: 157371059
Following gene: 157371064
Centisome position: 56.93
GC content: 59.14
Gene sequence:
>717_bases ATGACCGATTTTTCCCCACTGCTCAACGCCATCCCGTCCATCCAGCACGGTTTCGGCAACAAAAGTGCGCTGCTGCCAGG CCATCTGTTGGCCTATCGTTCTACCCTGCCGGAAAAAAAACAGGTGCATGGCACACGCATTGTTGACGTGACCCAGGCGG AACAACAGTGCGGCGAAGCCGATGGTTTCTATACCACTGAGCCAGGCATTCTGCTGAGCGTGTTAACGGCAGACTGCCTG CCGGTGATTTTCAGCCGCAACGACGGTTCTGCCATTGCTGCCGTCCATGCCGGTTGGCGTGGCCTGCTGGACGGCATACT GGAGCAACTGGCGGCGCGTATCCGCCGTGATGACTCGACGGCTAACTGGGTGGCCTCCATTGGCCCTGCTGCCGGCCCCT GTTGTTACGAAGTCAACGAGGAACTGGTCGCGCGGTTCAAGCAACAGCTGCCACTGCCCGCGGCCTTAATCAGCCCACGC TTTCGCCACCTGGACCTGGCCGCCATCGCCGAATCCAAACTGCGCGAACTGGGTTTTTCCGCCGTTGACCATGCCGGTAG CTGTACCATCTGCACCCCCAACACGGATCCGCGCCAGCCACAGCGTTTTAAATACACCAGCTACCGGCGCAACAGCCACC GACGCGAACAAGATCCCACTCATCCGGGGATTAGAGGGCGCAATCAGTACGCGGGAATTATTATTACCGGCGGATAA
Upstream 100 bases:
>100_bases CTTCTGTACGATGCAAGACAGATGCCGCAAGCCCCTAGCCAGGGAGGAAAAAAACTGGCTACACTGACGTTAACTTTTCT TACGCAGGCAAAGACGTGAT
Downstream 100 bases:
>100_bases CAGAAACGAAAAAACCCGCACTGAGGCGGGTTTTTTGTACAGCTGACGCTGATTAGATTGCAGTAACGTTTACTGCAGAT GGGCCTTTCTGGCCATCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MTDFSPLLNAIPSIQHGFGNKSALLPGHLLAYRSTLPEKKQVHGTRIVDVTQAEQQCGEADGFYTTEPGILLSVLTADCL PVIFSRNDGSAIAAVHAGWRGLLDGILEQLAARIRRDDSTANWVASIGPAAGPCCYEVNEELVARFKQQLPLPAALISPR FRHLDLAAIAESKLRELGFSAVDHAGSCTICTPNTDPRQPQRFKYTSYRRNSHRREQDPTHPGIRGRNQYAGIIITGG
Sequences:
>Translated_238_residues MTDFSPLLNAIPSIQHGFGNKSALLPGHLLAYRSTLPEKKQVHGTRIVDVTQAEQQCGEADGFYTTEPGILLSVLTADCL PVIFSRNDGSAIAAVHAGWRGLLDGILEQLAARIRRDDSTANWVASIGPAAGPCCYEVNEELVARFKQQLPLPAALISPR FRHLDLAAIAESKLRELGFSAVDHAGSCTICTPNTDPRQPQRFKYTSYRRNSHRREQDPTHPGIRGRNQYAGIIITGG >Mature_237_residues TDFSPLLNAIPSIQHGFGNKSALLPGHLLAYRSTLPEKKQVHGTRIVDVTQAEQQCGEADGFYTTEPGILLSVLTADCLP VIFSRNDGSAIAAVHAGWRGLLDGILEQLAARIRRDDSTANWVASIGPAAGPCCYEVNEELVARFKQQLPLPAALISPRF RHLDLAAIAESKLRELGFSAVDHAGSCTICTPNTDPRQPQRFKYTSYRRNSHRREQDPTHPGIRGRNQYAGIIITGG
Specific function: Unknown
COG id: COG1496
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0124 family [H]
Homologues:
Organism=Escherichia coli, GI1788945, Length=183, Percent_Identity=33.879781420765, Blast_Score=93, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003730 - InterPro: IPR011324 [H]
Pfam domain/function: PF02578 Cu-oxidase_4 [H]
EC number: NA
Molecular weight: Translated: 25981; Mature: 25850
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDFSPLLNAIPSIQHGFGNKSALLPGHLLAYRSTLPEKKQVHGTRIVDVTQAEQQCGEA CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHCCCEEEEECHHHHHCCCC DGFYTTEPGILLSVLTADCLPVIFSRNDGSAIAAVHAGWRGLLDGILEQLAARIRRDDST CCCEECCCHHHHHHHHHHHHEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCC ANWVASIGPAAGPCCYEVNEELVARFKQQLPLPAALISPRFRHLDLAAIAESKLRELGFS HHHHHHCCCCCCCHHHHCCHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCH AVDHAGSCTICTPNTDPRQPQRFKYTSYRRNSHRREQDPTHPGIRGRNQYAGIIITGG HHCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECC >Mature Secondary Structure TDFSPLLNAIPSIQHGFGNKSALLPGHLLAYRSTLPEKKQVHGTRIVDVTQAEQQCGEA CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHCCCEEEEECHHHHHCCCC DGFYTTEPGILLSVLTADCLPVIFSRNDGSAIAAVHAGWRGLLDGILEQLAARIRRDDST CCCEECCCHHHHHHHHHHHHEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCC ANWVASIGPAAGPCCYEVNEELVARFKQQLPLPAALISPRFRHLDLAAIAESKLRELGFS HHHHHHCCCCCCCHHHHCCHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCH AVDHAGSCTICTPNTDPRQPQRFKYTSYRRNSHRREQDPTHPGIRGRNQYAGIIITGG HHCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]