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The map label for this gene is yibD [H]

Identifier: 157371047

GI number: 157371047

Start: 3085153

End: 3086151

Strand: Reverse

Name: yibD [H]

Synonym: Spro_2807

Alternate gene names: 157371047

Gene position: 3086151-3085153 (Counterclockwise)

Preceding gene: 157371052

Following gene: 157371046

Centisome position: 56.64

GC content: 52.75

Gene sequence:

>999_bases
ATGCTGAGTGTTATTGTCCCGTTGCACAACGTGGGCGAACTGTTTGAGCCGTTTCTGGCATCACTGCTGGCCCAGAACGA
ACGTCGGTTGGAAGTGATCATCGTTAATGATGGTTCCACCGACGGCTCGGGTGATATCGCCCACCGCTATGCGCAGCAAC
ACACGCATATTACCGTGATTGATCAGCTTAATGCGGGGGTGTCCTGCGCCCGTAATGCCGGGTTGGCGGTTGCCAGGGGG
AAATATGTGGCATTCCCCGATGCCGATGACTTACTGGCTCCGGAAATGTATTCAACGCTGATTGAATTAGCCGAACAAAA
CCAATTGGATGTCATGCAGTGTAACGGTGAACGTTATTTCACCGACCAGGATGAATTGCAGCCGATTATTCCGCTAAAGC
GATTAGGTGATACCGATGTTATTAGCGGCGTGCAATGGCTGGAGCGTGCGTTAGAATCAAGAAAGTTTATTCATGTGGTC
TGGCTGGCGGTATATCGTCTTGATTTTATTAAGCAGCACCGGTTGTATTTCGAACCGGGTTTGCACCATCAGGATATTCC
CTGGACTACTGAAGTGATGTTTAATGCACAGCGGGTGAAATACCTTGGCAAAGCGCTGTATCGCCAACGGGTGCACGGCC
AGTCGATCAGTAACCGCCGCCGTACGGGCAAGGCAAACGTCGAGTATCAGCGCCATTACATGAAAATTGTAGCCATGCTG
GTGGCGTTGAATCGGCGTTATGCCGATAAAATTGCCATCCGTCCGGCTTTCCACTGGCAGATTACCCGTGAAGCCTTGGG
CATTTGCCACAGCATCCGTCGTGAGCCCGAGCTGGCAGCCCAGTGCCGTATCACCGATGAGTTCTTTCAGCTTGGCATCG
ATCGGGCGATGGTTGATAACGCGCGCGGCCTCAAACAGGGATGGCACGTTATTCTCTGGCTTCACCGCCTGAAGCAGTGG
CGACATGGCGATCCTTGTTCACTGCCGGCGGCCGAATAA

Upstream 100 bases:

>100_bases
AGAGTCGATGGGCCAATGCCTTATTTAATTGCACCCTGATATTTTTAAAAAATAGAAATATTCATTCGTTACTTTTTGCG
AAGAGCTGCCTATGCCCCTA

Downstream 100 bases:

>100_bases
CAGACGTTGGGATCCGTCGGTTTAAGGCGTATACTCAGCCTCCATTTTGCCGGAGAGAAACACATGCTTGCAGGTATGCC
GTCACTGAGTCATCTAGAGC

Product: putative glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MLSVIVPLHNVGELFEPFLASLLAQNERRLEVIIVNDGSTDGSGDIAHRYAQQHTHITVIDQLNAGVSCARNAGLAVARG
KYVAFPDADDLLAPEMYSTLIELAEQNQLDVMQCNGERYFTDQDELQPIIPLKRLGDTDVISGVQWLERALESRKFIHVV
WLAVYRLDFIKQHRLYFEPGLHHQDIPWTTEVMFNAQRVKYLGKALYRQRVHGQSISNRRRTGKANVEYQRHYMKIVAML
VALNRRYADKIAIRPAFHWQITREALGICHSIRREPELAAQCRITDEFFQLGIDRAMVDNARGLKQGWHVILWLHRLKQW
RHGDPCSLPAAE

Sequences:

>Translated_332_residues
MLSVIVPLHNVGELFEPFLASLLAQNERRLEVIIVNDGSTDGSGDIAHRYAQQHTHITVIDQLNAGVSCARNAGLAVARG
KYVAFPDADDLLAPEMYSTLIELAEQNQLDVMQCNGERYFTDQDELQPIIPLKRLGDTDVISGVQWLERALESRKFIHVV
WLAVYRLDFIKQHRLYFEPGLHHQDIPWTTEVMFNAQRVKYLGKALYRQRVHGQSISNRRRTGKANVEYQRHYMKIVAML
VALNRRYADKIAIRPAFHWQITREALGICHSIRREPELAAQCRITDEFFQLGIDRAMVDNARGLKQGWHVILWLHRLKQW
RHGDPCSLPAAE
>Mature_332_residues
MLSVIVPLHNVGELFEPFLASLLAQNERRLEVIIVNDGSTDGSGDIAHRYAQQHTHITVIDQLNAGVSCARNAGLAVARG
KYVAFPDADDLLAPEMYSTLIELAEQNQLDVMQCNGERYFTDQDELQPIIPLKRLGDTDVISGVQWLERALESRKFIHVV
WLAVYRLDFIKQHRLYFEPGLHHQDIPWTTEVMFNAQRVKYLGKALYRQRVHGQSISNRRRTGKANVEYQRHYMKIVAML
VALNRRYADKIAIRPAFHWQITREALGICHSIRREPELAAQCRITDEFFQLGIDRAMVDNARGLKQGWHVILWLHRLKQW
RHGDPCSLPAAE

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=320, Percent_Identity=48.75, Blast_Score=323, Evalue=8e-90,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 38248; Mature: 38248

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSVIVPLHNVGELFEPFLASLLAQNERRLEVIIVNDGSTDGSGDIAHRYAQQHTHITVI
CCEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCEEEEE
DQLNAGVSCARNAGLAVARGKYVAFPDADDLLAPEMYSTLIELAEQNQLDVMQCNGERYF
ECCCCCHHHHHCCCEEEECCCEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCEEE
TDQDELQPIIPLKRLGDTDVISGVQWLERALESRKFIHVVWLAVYRLDFIKQHRLYFEPG
CCHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCC
LHHQDIPWTTEVMFNAQRVKYLGKALYRQRVHGQSISNRRRTGKANVEYQRHYMKIVAML
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHH
VALNRRYADKIAIRPAFHWQITREALGICHSIRREPELAAQCRITDEFFQLGIDRAMVDN
HHHHHHHHHHEEECCHHHHEEHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHCCHHHHHHC
ARGLKQGWHVILWLHRLKQWRHGDPCSLPAAE
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLSVIVPLHNVGELFEPFLASLLAQNERRLEVIIVNDGSTDGSGDIAHRYAQQHTHITVI
CCEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCEEEEE
DQLNAGVSCARNAGLAVARGKYVAFPDADDLLAPEMYSTLIELAEQNQLDVMQCNGERYF
ECCCCCHHHHHCCCEEEECCCEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCEEE
TDQDELQPIIPLKRLGDTDVISGVQWLERALESRKFIHVVWLAVYRLDFIKQHRLYFEPG
CCHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCC
LHHQDIPWTTEVMFNAQRVKYLGKALYRQRVHGQSISNRRRTGKANVEYQRHYMKIVAML
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHH
VALNRRYADKIAIRPAFHWQITREALGICHSIRREPELAAQCRITDEFFQLGIDRAMVDN
HHHHHHHHHHEEECCHHHHEEHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHCCHHHHHHC
ARGLKQGWHVILWLHRLKQWRHGDPCSLPAAE
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 2647748 [H]