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The map label for this gene is yoaA [H]

Identifier: 157371003

GI number: 157371003

Start: 3042651

End: 3044555

Strand: Reverse

Name: yoaA [H]

Synonym: Spro_2763

Alternate gene names: 157371003

Gene position: 3044555-3042651 (Counterclockwise)

Preceding gene: 157371005

Following gene: 157371002

Centisome position: 55.88

GC content: 57.17

Gene sequence:

>1905_bases
GTGACAGACGATTTCGCAACAGACGGCGCCCTGGCGCAGGCAATCAAGGGTTTCAAACCGCGTGAAGCACAGCGGCAGAT
GGCGGAAGCGGTCACCGAAGCCATTAACTTCAAGCAGGAGTTGGTGGTCGAAGCGGGCACCGGCACCGGTAAAACCTTCG
CCTACCTGGCACCGGCACTGCGGGCCGATCGCAAAGTGATTATTTCCACCGGTTCAAAAGCGCTGCAGGACCAGCTTTAT
GCACGGGATCTGCCCACCGTTGCCAAGGCGCTGAACTACAAAGGCAAGATGGCGCTGTTGAAGGGGCGTTCTAATTATCT
GTGTCTGGAACGCCTGGAGCAGCAGTCGATGGCCGGTGGCGAACTGGCCGGACAGGCGCTGATCGATCTGGTCCATCTGC
GCAAATGGTCATCAATGACCAAAGAGGGTGACATCAGCAGCTGCAGCGACGTGGCGGAAGACAGCTTCGTCTGGCCGCTG
GTGACCAGTACCAACGATAACTGCCTGGGCAGCGATTGCCCGCTGTATAAAGATTGCTTTGTGGTCAAAGCCCGTCGCCG
CGCCATGGATGCGGATGTGGTGGTAGTGAACCACCATCTGTTTCTGGCGGATATGGTGGTGAAAGAGGGCGGTTTTGCCG
AACTGATCCCCGAGGCCGATGTGATGATCTTCGATGAAGCGCATCAGATCCCTGACATCGCCAGCCAGTACTTTGGCAAA
CAGCTAACCAGCCGCCAATTACTGGATCTGGCCAAAGACATTTCCATTGCTTACCGCACCGAAGTGCGTGACGCGGCGCA
GCTGCAAAAAAGTGCCGACCGTCTTAGCCAAAGTACGCAGGATTTCCGCTTAATGCTGGGAGAGCCAGGCTTTCGCGGTA
ACCTGCGCGAAGTACTAAGCCAACCTAATGTGCAGCGCGCCTTGCTGTTGCTCGATGATGCACTCGAACTCTGCTACGAC
GTAGTCAAGCTGTCCCTCGGTCGTTCAGCCTTGCTGGATGCCGCCTTCGAACGCGCCACGCTGTATCGTGCGCGCCTCAA
ACGTTTGAAAGAGGTGACGGAACCCGGTTTCAGCTACTGGTACGAGTGCAACTCACGCCATTTTATTTTGGCGCTGACGC
CGTTGACGGTCGCCGATCGTTTCCGCGAGTTGCTCGATGAAAAACCGGGCAGTTGGATTTTCACCTCGGCAACGTTATCG
GTTAATGAGCAAATGGGGCATTTTACCGATCGTCTGGGCCTGAATAAGGCCAAAACCTTGCTGTTGGCCAGCCCGTTCGA
CTATGCGAAACAGGCATTGCTGTGCGTGCCGCGCTTTTTGCCGTCACCGAACCAGCCGGGTGGGGCACGGCAATTGGCGC
GTATGCTGCGGCCGTTGATTGAGGCCAATAACGGCCGCTGTTTCTTCCTCTGTACCTCGCACCAGATGATGCGTGAACTG
GCGGAAGAGTTCCGTGCAACCATGACCTTGCCGGTGCTGTTGCAGGGGGAAACCAGTAAGGGCCAACTGTTGGCGCAATT
TGTTGAGTCCGGTAATGCGCTGCTGGTGGCGACCAGCAGTTTCTGGGAAGGAGTCGACGTGCGCGGCGATGCTTTATCGT
GCGTGATTATCGACAAGCTGCCGTTTACCTCGCCCGACGATCCCTTGCTGAAAGCGAGGATTGAAGATTGTCGACTGCGC
GGTGGCGATCCTTTTAACGATGTGCAATTGCCGGATGCGGTCATCACTCTGAAACAGGGAGTTGGGCGCTTGATCCGCGA
TACCGACGACCGTGGCGTGTTGGTGATCTGCGATAACCGCCTGGTGATGCGGCCGTATGGAGAAGTGTTCCTCAACAGCC
TGCCGCCGACGCCCCGTACCCGCGATATCGCCCAAGCGATTGCCTTCCTGCAGGCGGAGCGCTAG

Upstream 100 bases:

>100_bases
TATCACAGCCATCGGCAGAAATACTCGACGTTAAAGTCGGTGGTAGCCGCGCGGCAGGATTGGCATAATCAACGCTGAAT
AATACCGGCAGAGAGATAGC

Downstream 100 bases:

>100_bases
CGGATAGGCGTGACCACAGGGCTGTGCTACAATGCGCGCCCTGTATGAAAAACCCTGTTTTTTTCCCGCCTGAGGTTGGC
ATGTCCACGCGAATTTTAGC

Product: helicase c2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 634; Mature: 633

Protein sequence:

>634_residues
MTDDFATDGALAQAIKGFKPREAQRQMAEAVTEAINFKQELVVEAGTGTGKTFAYLAPALRADRKVIISTGSKALQDQLY
ARDLPTVAKALNYKGKMALLKGRSNYLCLERLEQQSMAGGELAGQALIDLVHLRKWSSMTKEGDISSCSDVAEDSFVWPL
VTSTNDNCLGSDCPLYKDCFVVKARRRAMDADVVVVNHHLFLADMVVKEGGFAELIPEADVMIFDEAHQIPDIASQYFGK
QLTSRQLLDLAKDISIAYRTEVRDAAQLQKSADRLSQSTQDFRLMLGEPGFRGNLREVLSQPNVQRALLLLDDALELCYD
VVKLSLGRSALLDAAFERATLYRARLKRLKEVTEPGFSYWYECNSRHFILALTPLTVADRFRELLDEKPGSWIFTSATLS
VNEQMGHFTDRLGLNKAKTLLLASPFDYAKQALLCVPRFLPSPNQPGGARQLARMLRPLIEANNGRCFFLCTSHQMMREL
AEEFRATMTLPVLLQGETSKGQLLAQFVESGNALLVATSSFWEGVDVRGDALSCVIIDKLPFTSPDDPLLKARIEDCRLR
GGDPFNDVQLPDAVITLKQGVGRLIRDTDDRGVLVICDNRLVMRPYGEVFLNSLPPTPRTRDIAQAIAFLQAER

Sequences:

>Translated_634_residues
MTDDFATDGALAQAIKGFKPREAQRQMAEAVTEAINFKQELVVEAGTGTGKTFAYLAPALRADRKVIISTGSKALQDQLY
ARDLPTVAKALNYKGKMALLKGRSNYLCLERLEQQSMAGGELAGQALIDLVHLRKWSSMTKEGDISSCSDVAEDSFVWPL
VTSTNDNCLGSDCPLYKDCFVVKARRRAMDADVVVVNHHLFLADMVVKEGGFAELIPEADVMIFDEAHQIPDIASQYFGK
QLTSRQLLDLAKDISIAYRTEVRDAAQLQKSADRLSQSTQDFRLMLGEPGFRGNLREVLSQPNVQRALLLLDDALELCYD
VVKLSLGRSALLDAAFERATLYRARLKRLKEVTEPGFSYWYECNSRHFILALTPLTVADRFRELLDEKPGSWIFTSATLS
VNEQMGHFTDRLGLNKAKTLLLASPFDYAKQALLCVPRFLPSPNQPGGARQLARMLRPLIEANNGRCFFLCTSHQMMREL
AEEFRATMTLPVLLQGETSKGQLLAQFVESGNALLVATSSFWEGVDVRGDALSCVIIDKLPFTSPDDPLLKARIEDCRLR
GGDPFNDVQLPDAVITLKQGVGRLIRDTDDRGVLVICDNRLVMRPYGEVFLNSLPPTPRTRDIAQAIAFLQAER
>Mature_633_residues
TDDFATDGALAQAIKGFKPREAQRQMAEAVTEAINFKQELVVEAGTGTGKTFAYLAPALRADRKVIISTGSKALQDQLYA
RDLPTVAKALNYKGKMALLKGRSNYLCLERLEQQSMAGGELAGQALIDLVHLRKWSSMTKEGDISSCSDVAEDSFVWPLV
TSTNDNCLGSDCPLYKDCFVVKARRRAMDADVVVVNHHLFLADMVVKEGGFAELIPEADVMIFDEAHQIPDIASQYFGKQ
LTSRQLLDLAKDISIAYRTEVRDAAQLQKSADRLSQSTQDFRLMLGEPGFRGNLREVLSQPNVQRALLLLDDALELCYDV
VKLSLGRSALLDAAFERATLYRARLKRLKEVTEPGFSYWYECNSRHFILALTPLTVADRFRELLDEKPGSWIFTSATLSV
NEQMGHFTDRLGLNKAKTLLLASPFDYAKQALLCVPRFLPSPNQPGGARQLARMLRPLIEANNGRCFFLCTSHQMMRELA
EEFRATMTLPVLLQGETSKGQLLAQFVESGNALLVATSSFWEGVDVRGDALSCVIIDKLPFTSPDDPLLKARIEDCRLRG
GDPFNDVQLPDAVITLKQGVGRLIRDTDDRGVLVICDNRLVMRPYGEVFLNSLPPTPRTRDIAQAIAFLQAER

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=630, Percent_Identity=80.9523809523809, Blast_Score=1070, Evalue=0.0,
Organism=Escherichia coli, GI1787018, Length=694, Percent_Identity=26.8011527377522, Blast_Score=181, Evalue=2e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR010614
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR006935 [H]

Pfam domain/function: PF06733 DEAD_2; PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 70498; Mature: 70367

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDDFATDGALAQAIKGFKPREAQRQMAEAVTEAINFKQELVVEAGTGTGKTFAYLAPAL
CCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHEEEECCCCCCCHHHHHHHHH
RADRKVIISTGSKALQDQLYARDLPTVAKALNYKGKMALLKGRSNYLCLERLEQQSMAGG
HCCCEEEEECCCHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCC
ELAGQALIDLVHLRKWSSMTKEGDISSCSDVAEDSFVWPLVTSTNDNCLGSDCPLYKDCF
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHH
VVKARRRAMDADVVVVNHHLFLADMVVKEGGFAELIPEADVMIFDEAHQIPDIASQYFGK
HHHHHHHCCCCCEEEEECHHHHHHHHHHCCCCCEECCCCCEEEECCCCCCHHHHHHHHHH
QLTSRQLLDLAKDISIAYRTEVRDAAQLQKSADRLSQSTQDFRLMLGEPGFRGNLREVLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCHHHHHC
QPNVQRALLLLDDALELCYDVVKLSLGRSALLDAAFERATLYRARLKRLKEVTEPGFSYW
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
YECNSRHFILALTPLTVADRFRELLDEKPGSWIFTSATLSVNEQMGHFTDRLGLNKAKTL
EECCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEEEEEHHHHHHHHHHCCCCCCCEE
LLASPFDYAKQALLCVPRFLPSPNQPGGARQLARMLRPLIEANNGRCFFLCTSHQMMREL
EEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHH
AEEFRATMTLPVLLQGETSKGQLLAQFVESGNALLVATSSFWEGVDVRGDALSCVIIDKL
HHHHHHHEEEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEEECC
PFTSPDDPLLKARIEDCRLRGGDPFNDVQLPDAVITLKQGVGRLIRDTDDRGVLVICDNR
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCE
LVMRPYGEVFLNSLPPTPRTRDIAQAIAFLQAER
EEECCCHHHHHHCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDDFATDGALAQAIKGFKPREAQRQMAEAVTEAINFKQELVVEAGTGTGKTFAYLAPAL
CCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHEEEECCCCCCCHHHHHHHHH
RADRKVIISTGSKALQDQLYARDLPTVAKALNYKGKMALLKGRSNYLCLERLEQQSMAGG
HCCCEEEEECCCHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCC
ELAGQALIDLVHLRKWSSMTKEGDISSCSDVAEDSFVWPLVTSTNDNCLGSDCPLYKDCF
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHH
VVKARRRAMDADVVVVNHHLFLADMVVKEGGFAELIPEADVMIFDEAHQIPDIASQYFGK
HHHHHHHCCCCCEEEEECHHHHHHHHHHCCCCCEECCCCCEEEECCCCCCHHHHHHHHHH
QLTSRQLLDLAKDISIAYRTEVRDAAQLQKSADRLSQSTQDFRLMLGEPGFRGNLREVLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCHHHHHC
QPNVQRALLLLDDALELCYDVVKLSLGRSALLDAAFERATLYRARLKRLKEVTEPGFSYW
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
YECNSRHFILALTPLTVADRFRELLDEKPGSWIFTSATLSVNEQMGHFTDRLGLNKAKTL
EECCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEEEEEHHHHHHHHHHCCCCCCCEE
LLASPFDYAKQALLCVPRFLPSPNQPGGARQLARMLRPLIEANNGRCFFLCTSHQMMREL
EEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHH
AEEFRATMTLPVLLQGETSKGQLLAQFVESGNALLVATSSFWEGVDVRGDALSCVIIDKL
HHHHHHHEEEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEEECC
PFTSPDDPLLKARIEDCRLRGGDPFNDVQLPDAVITLKQGVGRLIRDTDDRGVLVICDNR
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCE
LVMRPYGEVFLNSLPPTPRTRDIAQAIAFLQAER
EEECCCHHHHHHCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]