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The map label for this gene is ychE [H]

Identifier: 157370943

GI number: 157370943

Start: 2977447

End: 2978091

Strand: Reverse

Name: ychE [H]

Synonym: Spro_2703

Alternate gene names: 157370943

Gene position: 2978091-2977447 (Counterclockwise)

Preceding gene: 157370945

Following gene: 157370942

Centisome position: 54.66

GC content: 53.64

Gene sequence:

>645_bases
GTGGGCCAATCTCTGTTGGATTTTTCCGGCTTCATTAAATTTTTTGTCGGCCTGTTTGCGCTGGTCAACCCGGTGGGTAT
TTTGCCGGTGTTTATCAGCATGACCAGCTACCAGGCGGCGGCTGGGCGCAATAAAACCAACCTGACCGCCAACCTGTCGG
TCGCCATCATCCTGTGGACCTCGCTGTTTTTGGGGGAGGGGATTTTGCGCATGTTCGGTATCTCTATTGATTCATTCCGC
ATTGCCGGCGGCATCCTGGTGGTCAGCATTGCCATGTCGATGATCAGCGGCAAACTGGGTGAGGATAAACAGAACAAACA
GGAAAAATCAGAGAGCGCAATCCGTGAAAGCATTGGGGTCGTGCCATTGGCATTACCACTGATGGCTGGGCCGGGTGCTA
TCAGCTCCACCATTGTCTGGAGCTCCCGCTATCATAGTTGGCAGAACCTGCTGGGGTTCAGCCTGGCTATCGCGTTGTTC
GCTTTTTGCTGCTGGCTGTTGTTCCGGGCTGCGCCTTTGCTGGTGCGCCTGTTGGGGCAAACCGGTATTAACGTCATTAC
CCGTATCATGGGGTTGCTGCTGATGGCATTGGGTATCGAGTTTATCGTGACTGGCATAAAGGCGATATTCCCCGGCTTGC
TGTAA

Upstream 100 bases:

>100_bases
GATAAATCTCGCGCATGAGCAATGGATTACCCATGGCAATTCTATTACATTAGCGCGCGAAGGCAGTGTCACTTTTAAAG
CTATTAAAGCGGAGTCATTT

Downstream 100 bases:

>100_bases
TCAGCCGAATGAGTCGCGAATAGGATGATTCGCGGCTCAAATTAATTTTAAAATTAAAAACTATTATTAGCTCGCATTAA
TATAGTGCGTAATATGAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MGQSLLDFSGFIKFFVGLFALVNPVGILPVFISMTSYQAAAGRNKTNLTANLSVAIILWTSLFLGEGILRMFGISIDSFR
IAGGILVVSIAMSMISGKLGEDKQNKQEKSESAIRESIGVVPLALPLMAGPGAISSTIVWSSRYHSWQNLLGFSLAIALF
AFCCWLLFRAAPLLVRLLGQTGINVITRIMGLLLMALGIEFIVTGIKAIFPGLL

Sequences:

>Translated_214_residues
MGQSLLDFSGFIKFFVGLFALVNPVGILPVFISMTSYQAAAGRNKTNLTANLSVAIILWTSLFLGEGILRMFGISIDSFR
IAGGILVVSIAMSMISGKLGEDKQNKQEKSESAIRESIGVVPLALPLMAGPGAISSTIVWSSRYHSWQNLLGFSLAIALF
AFCCWLLFRAAPLLVRLLGQTGINVITRIMGLLLMALGIEFIVTGIKAIFPGLL
>Mature_213_residues
GQSLLDFSGFIKFFVGLFALVNPVGILPVFISMTSYQAAAGRNKTNLTANLSVAIILWTSLFLGEGILRMFGISIDSFRI
AGGILVVSIAMSMISGKLGEDKQNKQEKSESAIRESIGVVPLALPLMAGPGAISSTIVWSSRYHSWQNLLGFSLAIALFA
FCCWLLFRAAPLLVRLLGQTGINVITRIMGLLLMALGIEFIVTGIKAIFPGLL

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=214, Percent_Identity=83.6448598130841, Blast_Score=353, Evalue=5e-99,
Organism=Escherichia coli, GI1787809, Length=197, Percent_Identity=32.994923857868, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1789842, Length=191, Percent_Identity=28.2722513089005, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 22986; Mature: 22855

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQSLLDFSGFIKFFVGLFALVNPVGILPVFISMTSYQAAAGRNKTNLTANLSVAIILWT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHH
SLFLGEGILRMFGISIDSFRIAGGILVVSIAMSMISGKLGEDKQNKQEKSESAIRESIGV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCH
VPLALPLMAGPGAISSTIVWSSRYHSWQNLLGFSLAIALFAFCCWLLFRAAPLLVRLLGQ
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGINVITRIMGLLLMALGIEFIVTGIKAIFPGLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GQSLLDFSGFIKFFVGLFALVNPVGILPVFISMTSYQAAAGRNKTNLTANLSVAIILWT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHH
SLFLGEGILRMFGISIDSFRIAGGILVVSIAMSMISGKLGEDKQNKQEKSESAIRESIGV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCH
VPLALPLMAGPGAISSTIVWSSRYHSWQNLLGFSLAIALFAFCCWLLFRAAPLLVRLLGQ
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGINVITRIMGLLLMALGIEFIVTGIKAIFPGLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2015910; 9097039; 9278503 [H]