Click here to switch to the map view.

The map label for this gene is oppC [H]

Identifier: 157370939

GI number: 157370939

Start: 2971402

End: 2972310

Strand: Reverse

Name: oppC [H]

Synonym: Spro_2699

Alternate gene names: 157370939

Gene position: 2972310-2971402 (Counterclockwise)

Preceding gene: 157370940

Following gene: 157370938

Centisome position: 54.55

GC content: 55.45

Gene sequence:

>909_bases
ATGATGTTGACGAAAAAGAACAGCGAGGCTCTGGAGAACTTCAGCGAAAAGCTTGAAGTGGAAGGGCGCAGCCTGTGGCA
GGATGCCCGTCGCCGCTTTGTGCACAACCGTGCGGCAGTCAGCAGCCTGTTTGTGCTGGCGCTGATTACCCTGTTTGTGA
TTGTAGCCCCCTGGCTGTCACAGTTTGCCTATGACGATACCGATTGGGCGATGATGTCGGCAGCACCGGCCTTTGACGCG
GGGCACTACTTCGGGACCGATTCCTCCGGGCGTGATTTGCTGGTACGTGTAGCGATTGGCGGACGTATCTCGTTGATGGT
CGGCGTTTCCGCTGCGCTGGTGGCGGTCATTGTTGGTACCCTGTACGGCGCAATGTCCGGCTACCTGGGCGGTAAAATTG
ACTCGGTAATGATGCGTCTGCTGGAGATCCTCAACTCCTTCCCGTTTATGTTCTTCGTGATCCTGCTGGTGACCTTCTTT
GGTCAAAACATTCTGCTGATCTTTGTGGCGATCGGCATGGTGTCCTGGCTGGACATGGCGCGTATTGTGCGTGGACAGAC
CCTGAGCCTGAAACGCAAAGAGTTCATTGAAGCGGCGTTGGTATGCGGGGTTTCCAGCCGCAATATCGTACTGCGTCACA
TCGTGCCGAACGTGCTCGGCGTGGTGGTGGTATACGCTTCATTACTGGTGCCGAGCATGATCCTGTTCGAATCCTTCCTC
AGTTTCCTGGGGCTGGGTACTCAGGAGCCGTTAAGCAGTTGGGGTGCATTGCTGAGCGATGGTGCCAACTCGATGGAAGT
TTCACCGTGGTTGCTGCTGTTCCCGGCGGGTTTCCTGGTTGTTACTCTGTTTTGTTTCAACTTTATCGGCGATGGTCTGC
GTGACGCCCTCGACCCGAAAGATCGTTAA

Upstream 100 bases:

>100_bases
CCATTCTGGTGGGTGGCCTGACCATTTTGTTTAACGCGATCGTCGACGTGCTGTACGCCGTTATCGATCCAAAAATCCGT
TATTAAGCTGGAGCACGCAA

Downstream 100 bases:

>100_bases
GGAGTGCAATCATGAGCACCATTGAAAATCCGCAGTTGCAAACCGGTACCGGTGTTAAATCACCGTTGTTACTGGATGTT
AAAGATCTGCGCGTGACCTT

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MMLTKKNSEALENFSEKLEVEGRSLWQDARRRFVHNRAAVSSLFVLALITLFVIVAPWLSQFAYDDTDWAMMSAAPAFDA
GHYFGTDSSGRDLLVRVAIGGRISLMVGVSAALVAVIVGTLYGAMSGYLGGKIDSVMMRLLEILNSFPFMFFVILLVTFF
GQNILLIFVAIGMVSWLDMARIVRGQTLSLKRKEFIEAALVCGVSSRNIVLRHIVPNVLGVVVVYASLLVPSMILFESFL
SFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPAGFLVVTLFCFNFIGDGLRDALDPKDR

Sequences:

>Translated_302_residues
MMLTKKNSEALENFSEKLEVEGRSLWQDARRRFVHNRAAVSSLFVLALITLFVIVAPWLSQFAYDDTDWAMMSAAPAFDA
GHYFGTDSSGRDLLVRVAIGGRISLMVGVSAALVAVIVGTLYGAMSGYLGGKIDSVMMRLLEILNSFPFMFFVILLVTFF
GQNILLIFVAIGMVSWLDMARIVRGQTLSLKRKEFIEAALVCGVSSRNIVLRHIVPNVLGVVVVYASLLVPSMILFESFL
SFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPAGFLVVTLFCFNFIGDGLRDALDPKDR
>Mature_302_residues
MMLTKKNSEALENFSEKLEVEGRSLWQDARRRFVHNRAAVSSLFVLALITLFVIVAPWLSQFAYDDTDWAMMSAAPAFDA
GHYFGTDSSGRDLLVRVAIGGRISLMVGVSAALVAVIVGTLYGAMSGYLGGKIDSVMMRLLEILNSFPFMFFVILLVTFF
GQNILLIFVAIGMVSWLDMARIVRGQTLSLKRKEFIEAALVCGVSSRNIVLRHIVPNVLGVVVVYASLLVPSMILFESFL
SFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPAGFLVVTLFCFNFIGDGLRDALDPKDR

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=302, Percent_Identity=91.7218543046358, Blast_Score=511, Evalue=1e-146,
Organism=Escherichia coli, GI1787054, Length=279, Percent_Identity=36.9175627240143, Blast_Score=195, Evalue=2e-51,
Organism=Escherichia coli, GI1787760, Length=261, Percent_Identity=35.2490421455939, Blast_Score=170, Evalue=1e-43,
Organism=Escherichia coli, GI1789964, Length=278, Percent_Identity=33.0935251798561, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI1789889, Length=222, Percent_Identity=31.0810810810811, Blast_Score=131, Evalue=5e-32,
Organism=Escherichia coli, GI1788505, Length=220, Percent_Identity=33.1818181818182, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1787549, Length=275, Percent_Identity=26.1818181818182, Blast_Score=105, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33183; Mature: 33183

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLTKKNSEALENFSEKLEVEGRSLWQDARRRFVHNRAAVSSLFVLALITLFVIVAPWLS
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFAYDDTDWAMMSAAPAFDAGHYFGTDSSGRDLLVRVAIGGRISLMVGVSAALVAVIVGT
HHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH
LYGAMSGYLGGKIDSVMMRLLEILNSFPFMFFVILLVTFFGQNILLIFVAIGMVSWLDMA
HHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
RIVRGQTLSLKRKEFIEAALVCGVSSRNIVLRHIVPNVLGVVVVYASLLVPSMILFESFL
HHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPAGFLVVTLFCFNFIGDGLRDALDPK
HHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DR
CC
>Mature Secondary Structure
MMLTKKNSEALENFSEKLEVEGRSLWQDARRRFVHNRAAVSSLFVLALITLFVIVAPWLS
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFAYDDTDWAMMSAAPAFDAGHYFGTDSSGRDLLVRVAIGGRISLMVGVSAALVAVIVGT
HHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH
LYGAMSGYLGGKIDSVMMRLLEILNSFPFMFFVILLVTFFGQNILLIFVAIGMVSWLDMA
HHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
RIVRGQTLSLKRKEFIEAALVCGVSSRNIVLRHIVPNVLGVVVVYASLLVPSMILFESFL
HHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPAGFLVVTLFCFNFIGDGLRDALDPK
HHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]