| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is pntA [H]
Identifier: 157370825
GI number: 157370825
Start: 2841919
End: 2843448
Strand: Reverse
Name: pntA [H]
Synonym: Spro_2585
Alternate gene names: 157370825
Gene position: 2843448-2841919 (Counterclockwise)
Preceding gene: 157370828
Following gene: 157370824
Centisome position: 52.18
GC content: 57.65
Gene sequence:
>1530_bases ATGCGTATTGGTGTACCAAGAGAACGGTTGGCCAATGAAGCCCGGGTCGCAGCAACGCCGAAAACGGTGGAACAACTGCT GAAGCTGGGCTTTACCGTCGCGATTGAAAGCGGGGCGGGTAAACTGGCAAGTTTTGACGATAGCGCTTATGAAGCCGCTG GGGCAACAATCACTGACACCGCGGATGTCTGGCAGTCAGACCTGATTTTGAAAGTTAACGCACCGCTTGAGGACGAGATC GCGTTAATGCGCGAGGGCAGCACCCTGGTCAGCTTTATCTGGCCGGCGCAAAACCCGGAGCTGATCGCGCAGCTGGCCGC TCGCAACGTCACTGCGATGGCTATGGATTCTGTACCGCGTATCTCACGCGCACAATCCATGGACGCACTGAGCTCAATGG CCAACATCGCCGGTTACCGTGCGATCGTTGAGGCCGCGCATGAGTTTGGCCGCTTCTTCACCGGGCAAATCACCGCTGCC GGCAAGGTTCCACCCGCCAAGGTAATGATTATCGGTGCCGGCGTAGCGGGCCTGGCGGCCATCGGCGCCGCAGGCAGCCT GGGGGCGATTGTTCGCGCCTTCGACACCCGCCCGGAAGTCAAAGAGCAGGTGCAGAGCATGGGCGCTGAATTCCTCGAGC TGGATTTTGAGGAAGAAGCGGGCAGCGGCGATGGCTATGCCAAAGTGATGTCCGAAGCCTTTATCAAGGCCGAGATGGCG CTGTTCGCCGCCCAGGCGGCCGAGGTCGACATTATTGTCACCACCGCGTTGATCCCGGGCAAACCCGCACCGAAGCTTAT CACCAAAGAGATGGTGGCTTCGATGAAACCGGGTAGCGTGATCGTCGATCTGGCGGCGCAAAACGGTGGCAACTGTGAAC TGACCGTGGCCGATCGCGTGACCGTGACCGACAACGGCGTGAAAATCATTGGCTATACCGATTTGCCAAGCCGCCTGCCG ACTCAATCCTCACAGCTTTACGGCACCAACCTGGTTAACCTGCTGAAATTGCTGTCGAAAGAGAAAAACGGCGAAATTGA CGTTGATTTTGAAGATACCGTGATCCGCGGCGTTACCGTGGTGCGCAGTGGTGAAGTCACCTGGCCGGCACCGCCAATCC AGGTTTCTGCCCAGCCTAAACAGGCACCGGCAGCGGCACCGGTCGCCAAACCGGCGGCAAAACCGGTTTCGCCATGGTTG AAATATGGCCTGATGGCGCTGGCCATCATCCTGTTTGGCTGGCTGGCCAACGCCGCACCAAAAGAGTTCCTGTCTCACTT TACCGTGTTTGCGCTGGCCTGCGTGGTGGGTTACTACGTGGTTTGGAACGTCAGCCATGCATTACATACCCCGTTGATGT CGGTCACCAATGCGATCTCAGGGATTATCGTGGTCGGTGCGCTATTGCAGATTGGCCATGGCGGCTGGGTGAGTTTCCTC TCCTTTATCGCCGTGCTGATCGCCAGCATCAACATTTTTGGTGGATTCACCGTCACTCAGCGCATGCTGAAGATGTTCCG CAAGAACTAA
Upstream 100 bases:
>100_bases ATTCGTTGCCGACAAGGCTAATAAAAACCTGTCGGCCGGGGCCATCGCTATGGGTAGGAAGATAATAAACATCATCATAG ACAGGTGAGAAGGGAACATT
Downstream 100 bases:
>100_bases GGGGTAGCATATGTCTGGAGGATTAGTTACAGCTGCATACATTGTTGCCGCTATCCTGTTTATCTGTAGTCTGGCCGGCC TGTCGCGCCATGAAACGTCC
Product: NAD(P) transhydrogenase subunit alpha
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit alpha; Pyridine nucleotide transhydrogenase subunit alpha [H]
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MRIGVPRERLANEARVAATPKTVEQLLKLGFTVAIESGAGKLASFDDSAYEAAGATITDTADVWQSDLILKVNAPLEDEI ALMREGSTLVSFIWPAQNPELIAQLAARNVTAMAMDSVPRISRAQSMDALSSMANIAGYRAIVEAAHEFGRFFTGQITAA GKVPPAKVMIIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFEEEAGSGDGYAKVMSEAFIKAEMA LFAAQAAEVDIIVTTALIPGKPAPKLITKEMVASMKPGSVIVDLAAQNGGNCELTVADRVTVTDNGVKIIGYTDLPSRLP TQSSQLYGTNLVNLLKLLSKEKNGEIDVDFEDTVIRGVTVVRSGEVTWPAPPIQVSAQPKQAPAAAPVAKPAAKPVSPWL KYGLMALAIILFGWLANAAPKEFLSHFTVFALACVVGYYVVWNVSHALHTPLMSVTNAISGIIVVGALLQIGHGGWVSFL SFIAVLIASINIFGGFTVTQRMLKMFRKN
Sequences:
>Translated_509_residues MRIGVPRERLANEARVAATPKTVEQLLKLGFTVAIESGAGKLASFDDSAYEAAGATITDTADVWQSDLILKVNAPLEDEI ALMREGSTLVSFIWPAQNPELIAQLAARNVTAMAMDSVPRISRAQSMDALSSMANIAGYRAIVEAAHEFGRFFTGQITAA GKVPPAKVMIIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFEEEAGSGDGYAKVMSEAFIKAEMA LFAAQAAEVDIIVTTALIPGKPAPKLITKEMVASMKPGSVIVDLAAQNGGNCELTVADRVTVTDNGVKIIGYTDLPSRLP TQSSQLYGTNLVNLLKLLSKEKNGEIDVDFEDTVIRGVTVVRSGEVTWPAPPIQVSAQPKQAPAAAPVAKPAAKPVSPWL KYGLMALAIILFGWLANAAPKEFLSHFTVFALACVVGYYVVWNVSHALHTPLMSVTNAISGIIVVGALLQIGHGGWVSFL SFIAVLIASINIFGGFTVTQRMLKMFRKN >Mature_509_residues MRIGVPRERLANEARVAATPKTVEQLLKLGFTVAIESGAGKLASFDDSAYEAAGATITDTADVWQSDLILKVNAPLEDEI ALMREGSTLVSFIWPAQNPELIAQLAARNVTAMAMDSVPRISRAQSMDALSSMANIAGYRAIVEAAHEFGRFFTGQITAA GKVPPAKVMIIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFEEEAGSGDGYAKVMSEAFIKAEMA LFAAQAAEVDIIVTTALIPGKPAPKLITKEMVASMKPGSVIVDLAAQNGGNCELTVADRVTVTDNGVKIIGYTDLPSRLP TQSSQLYGTNLVNLLKLLSKEKNGEIDVDFEDTVIRGVTVVRSGEVTWPAPPIQVSAQPKQAPAAAPVAKPAAKPVSPWL KYGLMALAIILFGWLANAAPKEFLSHFTVFALACVVGYYVVWNVSHALHTPLMSVTNAISGIIVVGALLQIGHGGWVSFL SFIAVLIASINIFGGFTVTQRMLKMFRKN
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG3288
COG function: function code C; NAD/NADP transhydrogenase alpha subunit
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=546, Percent_Identity=49.4505494505495, Blast_Score=484, Evalue=1e-136, Organism=Homo sapiens, GI122939153, Length=546, Percent_Identity=49.4505494505495, Blast_Score=484, Evalue=1e-136, Organism=Escherichia coli, GI1787887, Length=510, Percent_Identity=85.2941176470588, Blast_Score=868, Evalue=0.0, Organism=Caenorhabditis elegans, GI17550456, Length=519, Percent_Identity=50.6743737957611, Blast_Score=477, Evalue=1e-135,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 - InterPro: IPR004571 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 53882; Mature: 53882
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS00836 ALADH_PNT_1 ; PS00837 ALADH_PNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIGVPRERLANEARVAATPKTVEQLLKLGFTVAIESGAGKLASFDDSAYEAAGATITDT CCCCCCHHHHCCCHHCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHCCCEECCC ADVWQSDLILKVNAPLEDEIALMREGSTLVSFIWPAQNPELIAQLAARNVTAMAMDSVPR HHHHCCCEEEEECCCCCHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCHHHHHHCCCH ISRAQSMDALSSMANIAGYRAIVEAAHEFGRFFTGQITAAGKVPPAKVMIIGAGVAGLAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECEEEECCCCCCCEEEEEECCHHHHHH IGAAGSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFEEEAGSGDGYAKVMSEAFIKAEMA HCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHEECCHHCCCCCCHHHHHHHHHHHHHHHH LFAAQAAEVDIIVTTALIPGKPAPKLITKEMVASMKPGSVIVDLAAQNGGNCELTVADRV HHHHHHCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECEE TVTDNGVKIIGYTDLPSRLPTQSSQLYGTNLVNLLKLLSKEKNGEIDVDFEDTVIRGVTV EEECCCEEEEEECCCCCCCCCCCCHHCCHHHHHHHHHHCCCCCCCEECCHHHHHHHCEEE VRSGEVTWPAPPIQVSAQPKQAPAAAPVAKPAAKPVSPWLKYGLMALAIILFGWLANAAP EECCCEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCH KEFLSHFTVFALACVVGYYVVWNVSHALHTPLMSVTNAISGIIVVGALLQIGHGGWVSFL HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH SFIAVLIASINIFGGFTVTQRMLKMFRKN HHHHHHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure MRIGVPRERLANEARVAATPKTVEQLLKLGFTVAIESGAGKLASFDDSAYEAAGATITDT CCCCCCHHHHCCCHHCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHCCCEECCC ADVWQSDLILKVNAPLEDEIALMREGSTLVSFIWPAQNPELIAQLAARNVTAMAMDSVPR HHHHCCCEEEEECCCCCHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCHHHHHHCCCH ISRAQSMDALSSMANIAGYRAIVEAAHEFGRFFTGQITAAGKVPPAKVMIIGAGVAGLAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECEEEECCCCCCCEEEEEECCHHHHHH IGAAGSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFEEEAGSGDGYAKVMSEAFIKAEMA HCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHEECCHHCCCCCCHHHHHHHHHHHHHHHH LFAAQAAEVDIIVTTALIPGKPAPKLITKEMVASMKPGSVIVDLAAQNGGNCELTVADRV HHHHHHCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECEE TVTDNGVKIIGYTDLPSRLPTQSSQLYGTNLVNLLKLLSKEKNGEIDVDFEDTVIRGVTV EEECCCEEEEEECCCCCCCCCCCCHHCCHHHHHHHHHHCCCCCCCEECCHHHHHHHCEEE VRSGEVTWPAPPIQVSAQPKQAPAAAPVAKPAAKPVSPWLKYGLMALAIILFGWLANAAP EECCCEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCH KEFLSHFTVFALACVVGYYVVWNVSHALHTPLMSVTNAISGIIVVGALLQIGHGGWVSFL HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH SFIAVLIASINIFGGFTVTQRMLKMFRKN HHHHHHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3525165; 1633824; 9097039; 9278503; 1932078 [H]