| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is pntB [H]
Identifier: 157370824
GI number: 157370824
Start: 2840514
End: 2841908
Strand: Reverse
Name: pntB [H]
Synonym: Spro_2584
Alternate gene names: 157370824
Gene position: 2841908-2840514 (Counterclockwise)
Preceding gene: 157370825
Following gene: 157370810
Centisome position: 52.16
GC content: 57.2
Gene sequence:
>1395_bases ATGTCTGGAGGATTAGTTACAGCTGCATACATTGTTGCCGCTATCCTGTTTATCTGTAGTCTGGCCGGCCTGTCGCGCCA TGAAACGTCCAAGCGGGGCAACCTGTTTGGCGTCGCCGGGATGGCGATTGCGCTGATCGCCACCATCCTCGGGCCGGATT CCGGCAACGTGGGCTGGATCATCATCGCGATGATTATCGGGGGTTCCATCGGGGTTTATCTGGCGAAAAAGGTCGAAATG ACCGAAATGCCAGAGCTGGTTGCGGTACTGCACAGTTTTGTGGGGCTGGCGGCGGTTCTGGTGGGCTTGAACAGCTACCT GGATCACGGCGCGCCAATGGAGCCGGTGATGGAGAATATCCATCTGACCGAAGTGTTCCTTGGCATCTTTATCGGTGCGG TTACTTTCACCGGTTCGATTGTCGCGTTCGGCAAACTGCGCGGCATCATCTCTTCCAAACCGCTGGCGTTGCCAAACCGA CACAAAATGAACCTGGCGGCACTGGTCGTTTCCTTCGTCCTGTTGGTGGTGTTTGTTCGCGCCGACAGCGTGGGTTGGCA AGCGGTGGCACTGGTGCTGATGACCGCTATCGCGCTGGCGTTTGGCTGGCATCTGGTGGCTTCCATCGGCGGTGCCGACA TGCCGGTCGTAGTGTCGATGCTCAACTCCTATTCGGGTTGGGCGGCAGCGGCAGCGGGTTTCATGTTGAGCAACGATTTG CTGATCGTGACCGGTGCGTTGGTGGGTTCTTCGGGGGCCATCCTGTCTTACATCATGTGTAAGGCGATGAACCGTTCGTT TATCAGCGTGATCGCCGGAGGCTTCGGTACCGATGGCTCTTCGACCGGTAATGCGGAAGAAATGGGCGAGTATCGCGAAA CCACCGCGGAAGAAGTTGCCGAGCAGTTGAAAAACTCCACGTCGGTAATCATCACCCCAGGCTACGGCATGGCGGTAGCG CAGGCGCAGTACCCGGTGGCGGAAATCACCGAGAAACTGCGCGCTCGTGGTATCAAGGTGCGTTTCGGTATTCATCCGGT TGCCGGGCGTTTACCGGGCCACATGAACGTGCTGTTGGCCGAAGCCAAGGTGCCATATGACGTGGTGCTGGAGATGGATG AAATCAATGACGATTTCGCTGATACCGACACCGTGCTGGTGATCGGCGCCAACGACACGGTGAACCCGGCCGCACTGGAA GATCCGCGCAGTCCAATCGCCGGTATGCCAGTGCTGGAAGTGTGGAAAGCGCAGAATGTGATTGCCTTTAAGCGTTCGAT GAACACCGGCTATGCCGGCGTGCAGAACCCGCTGTTCTTTAAAGAGAACACCCAGATGCTGTTTGGCGATGCCAAAGAGA GTGTGGAAGCGATACTGCGTGCGCTGCAGGCATAA
Upstream 100 bases:
>100_bases TCCTTTATCGCCGTGCTGATCGCCAGCATCAACATTTTTGGTGGATTCACCGTCACTCAGCGCATGCTGAAGATGTTCCG CAAGAACTAAGGGGTAGCAT
Downstream 100 bases:
>100_bases CGGAAGCAAATAAAAACGGGCCTTTTCGGCCCGTTTCTTTATGCGTCAAACATCAATCCTCGTCGTCGTGCTCATCGTCC TCATCGACTTCGATCGGGCA
Product: pyridine nucleotide transhydrogenase
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit beta; Pyridine nucleotide transhydrogenase subunit beta [H]
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MSGGLVTAAYIVAAILFICSLAGLSRHETSKRGNLFGVAGMAIALIATILGPDSGNVGWIIIAMIIGGSIGVYLAKKVEM TEMPELVAVLHSFVGLAAVLVGLNSYLDHGAPMEPVMENIHLTEVFLGIFIGAVTFTGSIVAFGKLRGIISSKPLALPNR HKMNLAALVVSFVLLVVFVRADSVGWQAVALVLMTAIALAFGWHLVASIGGADMPVVVSMLNSYSGWAAAAAGFMLSNDL LIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFGTDGSSTGNAEEMGEYRETTAEEVAEQLKNSTSVIITPGYGMAVA QAQYPVAEITEKLRARGIKVRFGIHPVAGRLPGHMNVLLAEAKVPYDVVLEMDEINDDFADTDTVLVIGANDTVNPAALE DPRSPIAGMPVLEVWKAQNVIAFKRSMNTGYAGVQNPLFFKENTQMLFGDAKESVEAILRALQA
Sequences:
>Translated_464_residues MSGGLVTAAYIVAAILFICSLAGLSRHETSKRGNLFGVAGMAIALIATILGPDSGNVGWIIIAMIIGGSIGVYLAKKVEM TEMPELVAVLHSFVGLAAVLVGLNSYLDHGAPMEPVMENIHLTEVFLGIFIGAVTFTGSIVAFGKLRGIISSKPLALPNR HKMNLAALVVSFVLLVVFVRADSVGWQAVALVLMTAIALAFGWHLVASIGGADMPVVVSMLNSYSGWAAAAAGFMLSNDL LIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFGTDGSSTGNAEEMGEYRETTAEEVAEQLKNSTSVIITPGYGMAVA QAQYPVAEITEKLRARGIKVRFGIHPVAGRLPGHMNVLLAEAKVPYDVVLEMDEINDDFADTDTVLVIGANDTVNPAALE DPRSPIAGMPVLEVWKAQNVIAFKRSMNTGYAGVQNPLFFKENTQMLFGDAKESVEAILRALQA >Mature_463_residues SGGLVTAAYIVAAILFICSLAGLSRHETSKRGNLFGVAGMAIALIATILGPDSGNVGWIIIAMIIGGSIGVYLAKKVEMT EMPELVAVLHSFVGLAAVLVGLNSYLDHGAPMEPVMENIHLTEVFLGIFIGAVTFTGSIVAFGKLRGIISSKPLALPNRH KMNLAALVVSFVLLVVFVRADSVGWQAVALVLMTAIALAFGWHLVASIGGADMPVVVSMLNSYSGWAAAAAGFMLSNDLL IVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFGTDGSSTGNAEEMGEYRETTAEEVAEQLKNSTSVIITPGYGMAVAQ AQYPVAEITEKLRARGIKVRFGIHPVAGRLPGHMNVLLAEAKVPYDVVLEMDEINDDFADTDTVLVIGANDTVNPAALED PRSPIAGMPVLEVWKAQNVIAFKRSMNTGYAGVQNPLFFKENTQMLFGDAKESVEAILRALQA
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG1282
COG function: function code C; NAD/NADP transhydrogenase beta subunit
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNT beta subunit family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=454, Percent_Identity=50.8810572687225, Blast_Score=448, Evalue=1e-126, Organism=Homo sapiens, GI122939153, Length=454, Percent_Identity=50.8810572687225, Blast_Score=448, Evalue=1e-126, Organism=Escherichia coli, GI1787886, Length=462, Percent_Identity=88.0952380952381, Blast_Score=827, Evalue=0.0, Organism=Caenorhabditis elegans, GI17550456, Length=461, Percent_Identity=49.4577006507592, Blast_Score=427, Evalue=1e-120,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012136 - InterPro: IPR004003 [H]
Pfam domain/function: PF02233 PNTB [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 48863; Mature: 48732
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGGLVTAAYIVAAILFICSLAGLSRHETSKRGNLFGVAGMAIALIATILGPDSGNVGWI CCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEHHHHHHHHHHHHHCCCCCCHHHH IIAMIIGGSIGVYLAKKVEMTEMPELVAVLHSFVGLAAVLVGLNSYLDHGAPMEPVMENI HHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH HLTEVFLGIFIGAVTFTGSIVAFGKLRGIISSKPLALPNRHKMNLAALVVSFVLLVVFVR HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ADSVGWQAVALVLMTAIALAFGWHLVASIGGADMPVVVSMLNSYSGWAAAAAGFMLSNDL CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCE LIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFGTDGSSTGNAEEMGEYRETTAEEVA EEEEEHHHCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH EQLKNSTSVIITPGYGMAVAQAQYPVAEITEKLRARGIKVRFGIHPVAGRLPGHMNVLLA HHHCCCCEEEEECCCCCCHHHCCCCHHHHHHHHHHCCEEEEECCCHHCCCCCCCCEEEEE EAKVPYDVVLEMDEINDDFADTDTVLVIGANDTVNPAALEDPRSPIAGMPVLEVWKAQNV CCCCCHHHEEEHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCH IAFKRSMNTGYAGVQNPLFFKENTQMLFGDAKESVEAILRALQA HHHHHHCCCCCCCCCCCEEEECCCCEEECCHHHHHHHHHHHHCC >Mature Secondary Structure SGGLVTAAYIVAAILFICSLAGLSRHETSKRGNLFGVAGMAIALIATILGPDSGNVGWI CCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEHHHHHHHHHHHHHCCCCCCHHHH IIAMIIGGSIGVYLAKKVEMTEMPELVAVLHSFVGLAAVLVGLNSYLDHGAPMEPVMENI HHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH HLTEVFLGIFIGAVTFTGSIVAFGKLRGIISSKPLALPNRHKMNLAALVVSFVLLVVFVR HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ADSVGWQAVALVLMTAIALAFGWHLVASIGGADMPVVVSMLNSYSGWAAAAAGFMLSNDL CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCE LIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFGTDGSSTGNAEEMGEYRETTAEEVA EEEEEHHHCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH EQLKNSTSVIITPGYGMAVAQAQYPVAEITEKLRARGIKVRFGIHPVAGRLPGHMNVLLA HHHCCCCEEEEECCCCCCHHHCCCCHHHHHHHHHHCCEEEEECCCHHCCCCCCCCEEEEE EAKVPYDVVLEMDEINDDFADTDTVLVIGANDTVNPAALEDPRSPIAGMPVLEVWKAQNV CCCCCHHHEEEHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCH IAFKRSMNTGYAGVQNPLFFKENTQMLFGDAKESVEAILRALQA HHHHHHCCCCCCCCCCCEEEECCCCEEECCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]