| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is lip2 [H]
Identifier: 157370782
GI number: 157370782
Start: 2798017
End: 2798931
Strand: Reverse
Name: lip2 [H]
Synonym: Spro_2542
Alternate gene names: 157370782
Gene position: 2798931-2798017 (Counterclockwise)
Preceding gene: 157370783
Following gene: 157370780
Centisome position: 51.37
GC content: 62.51
Gene sequence:
>915_bases ATGCCGCTTGACTCACAGATTGCCCGTTTTCTGGCGGAAACGACAGATGCCGCCGCGCCTGAATCCCTGAGTGAAATGCG TGCTGCCGCGCAGGCCGGGTTGTTGGCGTTGCAGGGGGAAGCAGAAGCCAGTGGCGGCGTCCGTGATGGAAGTGTGACCG CTGACGATGGCCATGAGATCGCCGTTCGCGCTTATGCGCCGCTGGGCGTGACGCAGGGTGAACCTCTGCCCGCGATGCTG TACGCCCACGGCGGCGGTTGGTGTCTGGGGACGCTGGCGCTGTACGACCAGCCTTGCCAGGCGCTGGCCAATGCCACCGG GCGGGTGATCTTGTCGGTTGATTATCGTCTGGCGCCGGAGCATCCGTATCCGCGGCCGCTGGAAGACCTGTATCAGGCAC TGTGCGACGTGGTTGAACGGGCCGATGAGTGGGGCGTTGACGTTACGCGCCTTGCGGTTGGTGGCGACAGCGCCGGTGGC AATCTGGCCGCCGCCGTGGCGCTGTTGGCCCGCGACCGGAATGGCCCACGGATTGAACATCAACTGTTGCTGTATCCGGC GTTAAGTCGCGCTATGGATACGGCGAGTTACCAGGCTTATGCGCAGGGTTACTACCTGACCAGGGAGGTCATGGAGTTTT GCTGGGGGCAGTATCTGGGGGACGGAGCCCAGGGGCATGCCCCTTACGCAGAACCGCTGCATGCCGCAACGTTGCGGCAG TTGCCACCGGCGACTATTCTGAGTTGTGAGTACGATCCGTTGCGCGATGAGGCCGAGCATTATGCCCAGCGGTTGCGTGA AGATGGGGTCGCGGTGCGCTGTGAACGGTTGCCGGGCATGGTACACGCCTGCATTCATATGCTGGGTTTGACCCCGGCAG CGCGAGTGTTATTCGATAAGGTTGGTTCGAAGTAA
Upstream 100 bases:
>100_bases CGCGGCGAAACGGTCGCTGGCTGCGGTCATTTCATCACCGAAGAGTGCCATGAGGCGTTTATCGCTCTGGTAGTGCCATT CTTGTCAGGGAGCCTGGCCG
Downstream 100 bases:
>100_bases AGCCCAGGCTGTTATCTGGGTGAGAATCCCCCTCTCCCGGGGGAGAGGGCCGGGGTTAGGGGAAACAGACAGAACCCTCT CCAGGGGGAGAGGGTCGGGG
Product: alpha/beta hydrolase domain-containing protein
Products: NA
Alternate protein names: Triacylglycerol lipase [H]
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MPLDSQIARFLAETTDAAAPESLSEMRAAAQAGLLALQGEAEASGGVRDGSVTADDGHEIAVRAYAPLGVTQGEPLPAML YAHGGGWCLGTLALYDQPCQALANATGRVILSVDYRLAPEHPYPRPLEDLYQALCDVVERADEWGVDVTRLAVGGDSAGG NLAAAVALLARDRNGPRIEHQLLLYPALSRAMDTASYQAYAQGYYLTREVMEFCWGQYLGDGAQGHAPYAEPLHAATLRQ LPPATILSCEYDPLRDEAEHYAQRLREDGVAVRCERLPGMVHACIHMLGLTPAARVLFDKVGSK
Sequences:
>Translated_304_residues MPLDSQIARFLAETTDAAAPESLSEMRAAAQAGLLALQGEAEASGGVRDGSVTADDGHEIAVRAYAPLGVTQGEPLPAML YAHGGGWCLGTLALYDQPCQALANATGRVILSVDYRLAPEHPYPRPLEDLYQALCDVVERADEWGVDVTRLAVGGDSAGG NLAAAVALLARDRNGPRIEHQLLLYPALSRAMDTASYQAYAQGYYLTREVMEFCWGQYLGDGAQGHAPYAEPLHAATLRQ LPPATILSCEYDPLRDEAEHYAQRLREDGVAVRCERLPGMVHACIHMLGLTPAARVLFDKVGSK >Mature_303_residues PLDSQIARFLAETTDAAAPESLSEMRAAAQAGLLALQGEAEASGGVRDGSVTADDGHEIAVRAYAPLGVTQGEPLPAMLY AHGGGWCLGTLALYDQPCQALANATGRVILSVDYRLAPEHPYPRPLEDLYQALCDVVERADEWGVDVTRLAVGGDSAGGN LAAAVALLARDRNGPRIEHQLLLYPALSRAMDTASYQAYAQGYYLTREVMEFCWGQYLGDGAQGHAPYAEPLHAATLRQL PPATILSCEYDPLRDEAEHYAQRLREDGVAVRCERLPGMVHACIHMLGLTPAARVLFDKVGSK
Specific function: Has An Esterase Activity. Triacetyl Glycerol (Triacetin) Is A Substrate Of The Enzyme. [C]
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Homo sapiens, GI68299767, Length=311, Percent_Identity=29.5819935691318, Blast_Score=123, Evalue=2e-28, Organism=Homo sapiens, GI206597554, Length=332, Percent_Identity=27.4096385542169, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI157041239, Length=275, Percent_Identity=29.0909090909091, Blast_Score=101, Evalue=7e-22, Organism=Homo sapiens, GI68051721, Length=308, Percent_Identity=27.2727272727273, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI61966717, Length=301, Percent_Identity=26.578073089701, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI157041237, Length=253, Percent_Identity=28.4584980237154, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI226423947, Length=191, Percent_Identity=32.9842931937173, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI21328446, Length=92, Percent_Identity=39.1304347826087, Blast_Score=68, Evalue=8e-12, Organism=Escherichia coli, GI1786682, Length=242, Percent_Identity=30.1652892561983, Blast_Score=100, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17567059, Length=264, Percent_Identity=28.4090909090909, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI72001146, Length=154, Percent_Identity=31.8181818181818, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71996133, Length=145, Percent_Identity=33.7931034482759, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17540028, Length=146, Percent_Identity=34.2465753424658, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24656084, Length=111, Percent_Identity=37.8378378378378, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI24656076, Length=111, Percent_Identity=37.8378378378378, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI20130169, Length=111, Percent_Identity=37.8378378378378, Blast_Score=69, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 32642; Mature: 32511
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLDSQIARFLAETTDAAAPESLSEMRAAAQAGLLALQGEAEASGGVRDGSVTADDGHEI CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCEECCCCCEE AVRAYAPLGVTQGEPLPAMLYAHGGGWCLGTLALYDQPCQALANATGRVILSVDYRLAPE EEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECEECCC HPYPRPLEDLYQALCDVVERADEWGVDVTRLAVGGDSAGGNLAAAVALLARDRNGPRIEH CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHH QLLLYPALSRAMDTASYQAYAQGYYLTREVMEFCWGQYLGDGAQGHAPYAEPLHAATLRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH LPPATILSCEYDPLRDEAEHYAQRLREDGVAVRCERLPGMVHACIHMLGLTPAARVLFDK CCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEHHHCCCHHHHHHHHHCCCHHHHHHHHH VGSK HCCC >Mature Secondary Structure PLDSQIARFLAETTDAAAPESLSEMRAAAQAGLLALQGEAEASGGVRDGSVTADDGHEI CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCEECCCCCEE AVRAYAPLGVTQGEPLPAMLYAHGGGWCLGTLALYDQPCQALANATGRVILSVDYRLAPE EEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECEECCC HPYPRPLEDLYQALCDVVERADEWGVDVTRLAVGGDSAGGNLAAAVALLARDRNGPRIEH CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCHH QLLLYPALSRAMDTASYQAYAQGYYLTREVMEFCWGQYLGDGAQGHAPYAEPLHAATLRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH LPPATILSCEYDPLRDEAEHYAQRLREDGVAVRCERLPGMVHACIHMLGLTPAARVLFDK CCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEHHHCCCHHHHHHHHHCCCHHHHHHHHH VGSK HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1907455 [H]