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The map label for this gene is yadT [C]

Identifier: 157370779

GI number: 157370779

Start: 2794165

End: 2795271

Strand: Reverse

Name: yadT [C]

Synonym: Spro_2539

Alternate gene names: 157370779

Gene position: 2795271-2794165 (Counterclockwise)

Preceding gene: 157370780

Following gene: 157370778

Centisome position: 51.3

GC content: 45.26

Gene sequence:

>1107_bases
ATGGGCGCTCGAAATTTTAGAACCTTTATGCTGTTCGCCATTTTTTTAATTATGCCTGGCATCACCAGTGCGGCCACGAC
CACATTAACCGATGTTCTGGGGCGGAAGATTACGCTTGATACCCCGGTAAAAAGGGCGGTTTTAGGTTTTTACTTTGAAG
ACTACATGGCCGTGGGTGGGGAAGCGGCATACGAGCATGTCATCGGCATTTCTCGTGAGGCCTGGCGGGGAAAGGTTCCG
GCAAATTGGAATATGTATGTTAAACACCAGCCATCACTGGCTCGTATCGCTGATATTGGCGAGGTGGATCTCCATAATAT
CTCGCTTGAAAATATAATATCTTTGAAGCCGGACGTCATTATTTTGGCTGAATGGCAATATGTTGCTTTGAAACATGAGG
TCTCACGCCTGGAAGAATTAAAAATCCCAGTGGTCGTGGTAGACTACAATGCGCAAACTGTCGAAAGACATGTCAGCTCT
ACAAAAATATTCGGCATACTCACGGGGCAAGAAAAACGCGCTCAGGAATTATCAGAACTTTACGCTAATAACATTGCTGA
CGTGCAGCGTAGAGTCAATGCGTCAGGATTAAAGAAACCCAAGGTTTATATTGAGTTTGGGAATAAAGGGCCTGGCGATT
ATTCATTCACCTACGGTAAGAACATGTGGGGTGCGATGCTGAAACTTGCCGGAGCAGACAATATTGCCGAGCCCTTTTTT
GAGTGGTGGGGTGTGATTAACCCAGAACAGCTGCTGTTTGCCAAGCCTGATGCTATTTTCATCTCCGGCAGAGAAAATAA
TAAGGTTTCGTCAGCGCTATCAATGGGTGTGGGGGTTGATAAAAATACGTCTGTTCAACAGCTTATAGCTTTTTCCACTC
GTAATGGCTGGAACTCATTGCCGGCGATAAAAAACAAGCAATTATTCGGCGTGTACCAGGGCGCATCAAGAACGCTTTCC
GACTTCGCCATGATTCAGTTTATTGCCAAATCACTTTACCCAGAACAGTTTAAAGATGTTGACCCGGTAAAGAACTACCT
GGATTACTACGAAAAATATTTACCGGTTAAACCGGAGGGGACATTTGCTGTTGCCGCATGGCAATAA

Upstream 100 bases:

>100_bases
GATATAAATATTAATAAAAATTATTATCATTTGCGCGTTTTTGACCCAAAAGAAATAAACAATAATTAAGAACAACCCCA
CTCCTGAGGACCTCCATTTT

Downstream 100 bases:

>100_bases
AGTCACCGCGCCCCCATGATGAGATGCGACCCGCAAACATTCAGTTCGGTTTGCGAAGTCTTTACCAGACCGGCGAAAAC
AGCAATTTGCTACAATATTC

Product: periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MGARNFRTFMLFAIFLIMPGITSAATTTLTDVLGRKITLDTPVKRAVLGFYFEDYMAVGGEAAYEHVIGISREAWRGKVP
ANWNMYVKHQPSLARIADIGEVDLHNISLENIISLKPDVIILAEWQYVALKHEVSRLEELKIPVVVVDYNAQTVERHVSS
TKIFGILTGQEKRAQELSELYANNIADVQRRVNASGLKKPKVYIEFGNKGPGDYSFTYGKNMWGAMLKLAGADNIAEPFF
EWWGVINPEQLLFAKPDAIFISGRENNKVSSALSMGVGVDKNTSVQQLIAFSTRNGWNSLPAIKNKQLFGVYQGASRTLS
DFAMIQFIAKSLYPEQFKDVDPVKNYLDYYEKYLPVKPEGTFAVAAWQ

Sequences:

>Translated_368_residues
MGARNFRTFMLFAIFLIMPGITSAATTTLTDVLGRKITLDTPVKRAVLGFYFEDYMAVGGEAAYEHVIGISREAWRGKVP
ANWNMYVKHQPSLARIADIGEVDLHNISLENIISLKPDVIILAEWQYVALKHEVSRLEELKIPVVVVDYNAQTVERHVSS
TKIFGILTGQEKRAQELSELYANNIADVQRRVNASGLKKPKVYIEFGNKGPGDYSFTYGKNMWGAMLKLAGADNIAEPFF
EWWGVINPEQLLFAKPDAIFISGRENNKVSSALSMGVGVDKNTSVQQLIAFSTRNGWNSLPAIKNKQLFGVYQGASRTLS
DFAMIQFIAKSLYPEQFKDVDPVKNYLDYYEKYLPVKPEGTFAVAAWQ
>Mature_367_residues
GARNFRTFMLFAIFLIMPGITSAATTTLTDVLGRKITLDTPVKRAVLGFYFEDYMAVGGEAAYEHVIGISREAWRGKVPA
NWNMYVKHQPSLARIADIGEVDLHNISLENIISLKPDVIILAEWQYVALKHEVSRLEELKIPVVVVDYNAQTVERHVSST
KIFGILTGQEKRAQELSELYANNIADVQRRVNASGLKKPKVYIEFGNKGPGDYSFTYGKNMWGAMLKLAGADNIAEPFFE
WWGVINPEQLLFAKPDAIFISGRENNKVSSALSMGVGVDKNTSVQQLIAFSTRNGWNSLPAIKNKQLFGVYQGASRTLSD
FAMIQFIAKSLYPEQFKDVDPVKNYLDYYEKYLPVKPEGTFAVAAWQ

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 41298; Mature: 41167

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGARNFRTFMLFAIFLIMPGITSAATTTLTDVLGRKITLDTPVKRAVLGFYFEDYMAVGG
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHCCC
EAAYEHVIGISREAWRGKVPANWNMYVKHQPSLARIADIGEVDLHNISLENIISLKPDVI
HHHHHHHHCCCHHHHCCCCCCCCEEEEEECCCHHHHHCCCCCCEECCCHHHHHCCCCCEE
ILAEWQYVALKHEVSRLEELKIPVVVVDYNAQTVERHVSSTKIFGILTGQEKRAQELSEL
EEECCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCEEEEEEECCHHHHHHHHHH
YANNIADVQRRVNASGLKKPKVYIEFGNKGPGDYSFTYGKNMWGAMLKLAGADNIAEPFF
HHCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEECCCHHHHHHHHHCCCCCHHHHHH
EWWGVINPEQLLFAKPDAIFISGRENNKVSSALSMGVGVDKNTSVQQLIAFSTRNGWNSL
HHHCCCCHHHEEEECCCEEEEECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCC
PAIKNKQLFGVYQGASRTLSDFAMIQFIAKSLYPEQFKDVDPVKNYLDYYEKYLPVKPEG
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHCCCCCCC
TFAVAAWQ
CEEEEECC
>Mature Secondary Structure 
GARNFRTFMLFAIFLIMPGITSAATTTLTDVLGRKITLDTPVKRAVLGFYFEDYMAVGG
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHCCC
EAAYEHVIGISREAWRGKVPANWNMYVKHQPSLARIADIGEVDLHNISLENIISLKPDVI
HHHHHHHHCCCHHHHCCCCCCCCEEEEEECCCHHHHHCCCCCCEECCCHHHHHCCCCCEE
ILAEWQYVALKHEVSRLEELKIPVVVVDYNAQTVERHVSSTKIFGILTGQEKRAQELSEL
EEECCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCEEEEEEECCHHHHHHHHHH
YANNIADVQRRVNASGLKKPKVYIEFGNKGPGDYSFTYGKNMWGAMLKLAGADNIAEPFF
HHCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEECCCHHHHHHHHHCCCCCHHHHHH
EWWGVINPEQLLFAKPDAIFISGRENNKVSSALSMGVGVDKNTSVQQLIAFSTRNGWNSL
HHHCCCCHHHEEEECCCEEEEECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCC
PAIKNKQLFGVYQGASRTLSDFAMIQFIAKSLYPEQFKDVDPVKNYLDYYEKYLPVKPEG
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHCCCCCCC
TFAVAAWQ
CEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]