| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is yxeQ [H]
Identifier: 157370605
GI number: 157370605
Start: 2579455
End: 2580774
Strand: Reverse
Name: yxeQ [H]
Synonym: Spro_2365
Alternate gene names: 157370605
Gene position: 2580774-2579455 (Counterclockwise)
Preceding gene: 157370606
Following gene: 157370604
Centisome position: 47.36
GC content: 61.97
Gene sequence:
>1320_bases TTGTCATCGCTCATAACCGCTCAATTTGCCCGACTGGTGCTGGATAGCCGGCCCGAAGCCTCCGCTCTGTTGGCCGCCCG TGTTGGGGTGATGGATTATTTCGCCTGCGCATTGCCTATTGCCCAGGGCGCAATCACCGACAGCGGGCTGGCGGCGGTGA AAACGGTATTCCCACCTGTCGGGCCAGAGAACCGCGCGCTGTATTTTGGCTATGTCAGCCACTCGCTGGATTTTGATGAT TATCACCCCGCGCTACGCGGTCACCCGACCACGGTGGTGCTGTCTGCGCTGTTGGCGCTGACCGGCGATACCCCGGACGT TAATGCGCTGCTGAGTGCCTATGCCGTCGGCGTTGAAGCCGCCGGGCGACTGGGGCTGGCTGCGGGAACCCAGCATTATC AGTTGGGTTTTCACAGCACCGCCACCCTGGGCGCGGTGGCCGCCAGTGCGGCTGCGGCGCGTTATTTACAACTGACACCA CAACAAACTCAGATCGCACTCGGGCTGGCCGCCACCCAGGCCGCCGGGTTGCGTAGCCAGTTTGGTTCGGCCGCCAAACC GCTGCATGCGGGACTGGCGGCACGCGCGGCGGTAAATGCGGTGCTGCTGGCTCAGGCGGGTTTTATCGGTCAGTCGGAAG GCGTGATAGACAGCCTGTTGCACTCGCACGGTGACGGACGGCAGCGGCCGGAACTGTTGACCGCAGACTGGGGCGCCCCC TGGCGCATTCTGCAACCGGGCCTGGAGTTTAAACGCTACCCGACCTGCGGCGGTACCCACAGCGCCGCCGAAGCGGCATT CATCCTGCGTGAGCGCCTGCTCGAACAAGGCATTACCGCCGCCGATATCCCCGCGGCAATCCGTCACATTCAGGTCAGTT TTCCACCTGGCGCCGATACCGCGCCCTATATTCGTCGCCCGTCAAACGGGGTCGAAGCGCGTTTCAGCCTGGAGTATGTC ATTGCCGATGCGCTGTACAGCGGTAGCGTGCCGCTGATGCACTACGGCGAAAACCCGGTTGATCCGCTGATTGCTGCACT GGCGGCGCGGGTTGAGCGCCACGCCGACCTGACGGCTCCACCGGATGAACTGGATGCAGAGTTACGCTTCCACCGCGTGA CCTTAACCCTGCATGACGGCCGCCAGTTAAGTGACATTGTCACAAGAAAGCAAACTGCCGCCCGCCAAACCGACGTCAAC GCCAAGCTGCGCAGCATTCTGCAACTGTTGCCGCATCTGGACAGTGACCGCGTGATCGGCGACTGCGCCTTAGCGCAGCC CGAGACGCTGCTCCGTTTAATCAAATTATTAAATCAATAA
Upstream 100 bases:
>100_bases GAAAGTCCCGTTCGTTCTTTCGGCCCCCGCAAAATCGCCACACAATGAAGTCTGAATTGCAGTCCCATGCATAACCGCAT AAAAAATCAGGTTTTATATC
Downstream 100 bases:
>100_bases TAAATATAGGAATAATTATGAGTACTTCACCTTCAACACCATCGCGTCAATTACGTCTCGGCCTGTTTGTTCAGGCGCTG GGCCACCACGTCGGCGGCTG
Product: MmgE/PrpD family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MSSLITAQFARLVLDSRPEASALLAARVGVMDYFACALPIAQGAITDSGLAAVKTVFPPVGPENRALYFGYVSHSLDFDD YHPALRGHPTTVVLSALLALTGDTPDVNALLSAYAVGVEAAGRLGLAAGTQHYQLGFHSTATLGAVAASAAAARYLQLTP QQTQIALGLAATQAAGLRSQFGSAAKPLHAGLAARAAVNAVLLAQAGFIGQSEGVIDSLLHSHGDGRQRPELLTADWGAP WRILQPGLEFKRYPTCGGTHSAAEAAFILRERLLEQGITAADIPAAIRHIQVSFPPGADTAPYIRRPSNGVEARFSLEYV IADALYSGSVPLMHYGENPVDPLIAALAARVERHADLTAPPDELDAELRFHRVTLTLHDGRQLSDIVTRKQTAARQTDVN AKLRSILQLLPHLDSDRVIGDCALAQPETLLRLIKLLNQ
Sequences:
>Translated_439_residues MSSLITAQFARLVLDSRPEASALLAARVGVMDYFACALPIAQGAITDSGLAAVKTVFPPVGPENRALYFGYVSHSLDFDD YHPALRGHPTTVVLSALLALTGDTPDVNALLSAYAVGVEAAGRLGLAAGTQHYQLGFHSTATLGAVAASAAAARYLQLTP QQTQIALGLAATQAAGLRSQFGSAAKPLHAGLAARAAVNAVLLAQAGFIGQSEGVIDSLLHSHGDGRQRPELLTADWGAP WRILQPGLEFKRYPTCGGTHSAAEAAFILRERLLEQGITAADIPAAIRHIQVSFPPGADTAPYIRRPSNGVEARFSLEYV IADALYSGSVPLMHYGENPVDPLIAALAARVERHADLTAPPDELDAELRFHRVTLTLHDGRQLSDIVTRKQTAARQTDVN AKLRSILQLLPHLDSDRVIGDCALAQPETLLRLIKLLNQ >Mature_438_residues SSLITAQFARLVLDSRPEASALLAARVGVMDYFACALPIAQGAITDSGLAAVKTVFPPVGPENRALYFGYVSHSLDFDDY HPALRGHPTTVVLSALLALTGDTPDVNALLSAYAVGVEAAGRLGLAAGTQHYQLGFHSTATLGAVAASAAAARYLQLTPQ QTQIALGLAATQAAGLRSQFGSAAKPLHAGLAARAAVNAVLLAQAGFIGQSEGVIDSLLHSHGDGRQRPELLTADWGAPW RILQPGLEFKRYPTCGGTHSAAEAAFILRERLLEQGITAADIPAAIRHIQVSFPPGADTAPYIRRPSNGVEARFSLEYVI ADALYSGSVPLMHYGENPVDPLIAALAARVERHADLTAPPDELDAELRFHRVTLTLHDGRQLSDIVTRKQTAARQTDVNA KLRSILQLLPHLDSDRVIGDCALAQPETLLRLIKLLNQ
Specific function: Unknown
COG id: COG2079
COG function: function code R; Uncharacterized protein involved in propionate catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prpD family [H]
Homologues:
Organism=Homo sapiens, GI310129732, Length=394, Percent_Identity=29.1878172588832, Blast_Score=116, Evalue=4e-26, Organism=Homo sapiens, GI310110533, Length=394, Percent_Identity=29.1878172588832, Blast_Score=116, Evalue=4e-26, Organism=Homo sapiens, GI310123058, Length=395, Percent_Identity=29.1139240506329, Blast_Score=116, Evalue=4e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005656 [H]
Pfam domain/function: PF03972 MmgE_PrpD [H]
EC number: NA
Molecular weight: Translated: 46585; Mature: 46453
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLITAQFARLVLDSRPEASALLAARVGVMDYFACALPIAQGAITDSGLAAVKTVFPPV CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC GPENRALYFGYVSHSLDFDDYHPALRGHPTTVVLSALLALTGDTPDVNALLSAYAVGVEA CCCCCEEEEEEECCCCCCCCCCCHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AGRLGLAAGTQHYQLGFHSTATLGAVAASAAAARYLQLTPQQTQIALGLAATQAAGLRSQ CCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHEEHHHHHHHHHHHHHH FGSAAKPLHAGLAARAAVNAVLLAQAGFIGQSEGVIDSLLHSHGDGRQRPELLTADWGAP HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCC WRILQPGLEFKRYPTCGGTHSAAEAAFILRERLLEQGITAADIPAAIRHIQVSFPPGADT HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCCCC APYIRRPSNGVEARFSLEYVIADALYSGSVPLMHYGENPVDPLIAALAARVERHADLTAP CCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCC PDELDAELRFHRVTLTLHDGRQLSDIVTRKQTAARQTDVNAKLRSILQLLPHLDSDRVIG HHHHCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCEEE DCALAQPETLLRLIKLLNQ HHHCCCHHHHHHHHHHHCC >Mature Secondary Structure SSLITAQFARLVLDSRPEASALLAARVGVMDYFACALPIAQGAITDSGLAAVKTVFPPV CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC GPENRALYFGYVSHSLDFDDYHPALRGHPTTVVLSALLALTGDTPDVNALLSAYAVGVEA CCCCCEEEEEEECCCCCCCCCCCHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AGRLGLAAGTQHYQLGFHSTATLGAVAASAAAARYLQLTPQQTQIALGLAATQAAGLRSQ CCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHEEHHHHHHHHHHHHHH FGSAAKPLHAGLAARAAVNAVLLAQAGFIGQSEGVIDSLLHSHGDGRQRPELLTADWGAP HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCC WRILQPGLEFKRYPTCGGTHSAAEAAFILRERLLEQGITAADIPAAIRHIQVSFPPGADT HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCCCC APYIRRPSNGVEARFSLEYVIADALYSGSVPLMHYGENPVDPLIAALAARVERHADLTAP CCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCC PDELDAELRFHRVTLTLHDGRQLSDIVTRKQTAARQTDVNAKLRSILQLLPHLDSDRVIG HHHHCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCEEE DCALAQPETLLRLIKLLNQ HHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377 [H]