| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is glnP [H]
Identifier: 157370602
GI number: 157370602
Start: 2576255
End: 2577172
Strand: Reverse
Name: glnP [H]
Synonym: Spro_2362
Alternate gene names: 157370602
Gene position: 2577172-2576255 (Counterclockwise)
Preceding gene: 157370603
Following gene: 157370601
Centisome position: 47.3
GC content: 58.5
Gene sequence:
>918_bases ATGAGTGGGCAATACCCTACCGACGATGCCGAGCTGCGCATTGTCGGTCATCGGCATTACGGCCGCTGGTTCAGCGCACT GCTGGTGCTGTTGATCGTTGGCATTATCGCCCATTCGATGCTGCATAACCCGCGTTTCGAATGGGCCGTGGTGGCGGAAA ACTTCACCGAAGAGTCGATTATCAACGGCGTGATCATGACGCTGAAGCTGACGGTGATTTCAGTGATCTTCGGCTTCGCC GGCGGCGTGCTGCTGGCATTGATGCGCCTGTCTGCTAATCCGGTGCTGGTGGCGGTGAGCTGGTTCTATACCTGGTTCTT CCGCGCGGTACCGATGCTGGTGCAGCTTTTCCTGTGGTACAACATCGCCGCGCTCTATCCGCGCATCAGCCTGTGGATCC CGTTCCTTGGGGAAGTTGCCAGCGCGCCGACCAATACCATTATCAGCACCTTCAGCGCGGCGGTGATCGCATTGGTAATG CATCAATCGGCTTACGCGGCAGAAATTGTGCGCGCCGGTATCCAAAGCGTCGGCAGCGGTCAGTTGGAAGCCGCCAAGGC ACTGGGTTATCGTCGTGGGCAAATCCTGTGGCGGGTGGTTTTGCCGCAGGCGATGCGCACTATTTTGCCACCGGCCGGTA ATGAGGTGATCGGGCAGCTAAAAACCACCGCGGTGGTATCGGTGATTGCCCTGCAGGACGTGCTGTATTCGGCGCAGATC ATCTACCAGCGCACCTACGAAGTCATTCCGCTGCTGCTGGTGGCCACGCTGTGGTATCTGGTGATGACCTCAATTTTGTC GATCGGCCAGCACTACGTTGAACGCTACTTTGGTCGAGGCAGCCAGGCCAGCCGCAGCAACTGGCTGTTTCGCCGCCGCA AGGCGTCGGTTAGCCAGCCACAGGGAGCTGAATCATGA
Upstream 100 bases:
>100_bases ACTCGCTGATTGCCGATGGCAGCTATCAGAAAATCCTCGACGGCTGGGATATCGGTTTTGGCGCGGTGAAAACCGCCGGT ATTAATGAAGAGATCGCAAA
Downstream 100 bases:
>100_bases GCGCTGCCATTCACATTAATCAGGTTCGCAAGTCCTTCTCCGGCACCGAAGTGTTGAAGAATATCAGCCTGCAGATCCCG GCCGGCTCGGTCACGGTGAT
Product: polar amino acid ABC transporter inner membrane subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MSGQYPTDDAELRIVGHRHYGRWFSALLVLLIVGIIAHSMLHNPRFEWAVVAENFTEESIINGVIMTLKLTVISVIFGFA GGVLLALMRLSANPVLVAVSWFYTWFFRAVPMLVQLFLWYNIAALYPRISLWIPFLGEVASAPTNTIISTFSAAVIALVM HQSAYAAEIVRAGIQSVGSGQLEAAKALGYRRGQILWRVVLPQAMRTILPPAGNEVIGQLKTTAVVSVIALQDVLYSAQI IYQRTYEVIPLLLVATLWYLVMTSILSIGQHYVERYFGRGSQASRSNWLFRRRKASVSQPQGAES
Sequences:
>Translated_305_residues MSGQYPTDDAELRIVGHRHYGRWFSALLVLLIVGIIAHSMLHNPRFEWAVVAENFTEESIINGVIMTLKLTVISVIFGFA GGVLLALMRLSANPVLVAVSWFYTWFFRAVPMLVQLFLWYNIAALYPRISLWIPFLGEVASAPTNTIISTFSAAVIALVM HQSAYAAEIVRAGIQSVGSGQLEAAKALGYRRGQILWRVVLPQAMRTILPPAGNEVIGQLKTTAVVSVIALQDVLYSAQI IYQRTYEVIPLLLVATLWYLVMTSILSIGQHYVERYFGRGSQASRSNWLFRRRKASVSQPQGAES >Mature_304_residues SGQYPTDDAELRIVGHRHYGRWFSALLVLLIVGIIAHSMLHNPRFEWAVVAENFTEESIINGVIMTLKLTVISVIFGFAG GVLLALMRLSANPVLVAVSWFYTWFFRAVPMLVQLFLWYNIAALYPRISLWIPFLGEVASAPTNTIISTFSAAVIALVMH QSAYAAEIVRAGIQSVGSGQLEAAKALGYRRGQILWRVVLPQAMRTILPPAGNEVIGQLKTTAVVSVIALQDVLYSAQII YQRTYEVIPLLLVATLWYLVMTSILSIGQHYVERYFGRGSQASRSNWLFRRRKASVSQPQGAES
Specific function: Part of the binding-protein-dependent transport system for glutamine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788226, Length=230, Percent_Identity=34.3478260869565, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI1786873, Length=236, Percent_Identity=33.4745762711864, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1788645, Length=212, Percent_Identity=31.6037735849057, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1788646, Length=226, Percent_Identity=30.9734513274336, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI87082239, Length=226, Percent_Identity=34.070796460177, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI1786874, Length=218, Percent_Identity=30.2752293577982, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1787086, Length=217, Percent_Identity=29.0322580645161, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1787087, Length=231, Percent_Identity=31.6017316017316, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1787030, Length=217, Percent_Identity=27.1889400921659, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI48994930, Length=131, Percent_Identity=32.0610687022901, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 33944; Mature: 33813
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGQYPTDDAELRIVGHRHYGRWFSALLVLLIVGIIAHSMLHNPRFEWAVVAENFTEESI CCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHH INGVIMTLKLTVISVIFGFAGGVLLALMRLSANPVLVAVSWFYTWFFRAVPMLVQLFLWY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH NIAALYPRISLWIPFLGEVASAPTNTIISTFSAAVIALVMHQSAYAAEIVRAGIQSVGSG HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QLEAAKALGYRRGQILWRVVLPQAMRTILPPAGNEVIGQLKTTAVVSVIALQDVLYSAQI HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IYQRTYEVIPLLLVATLWYLVMTSILSIGQHYVERYFGRGSQASRSNWLFRRRKASVSQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC QGAES CCCCC >Mature Secondary Structure SGQYPTDDAELRIVGHRHYGRWFSALLVLLIVGIIAHSMLHNPRFEWAVVAENFTEESI CCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHH INGVIMTLKLTVISVIFGFAGGVLLALMRLSANPVLVAVSWFYTWFFRAVPMLVQLFLWY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH NIAALYPRISLWIPFLGEVASAPTNTIISTFSAAVIALVMHQSAYAAEIVRAGIQSVGSG HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QLEAAKALGYRRGQILWRVVLPQAMRTILPPAGNEVIGQLKTTAVVSVIALQDVLYSAQI HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IYQRTYEVIPLLLVATLWYLVMTSILSIGQHYVERYFGRGSQASRSNWLFRRRKASVSQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC QGAES CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA