| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is iorB [H]
Identifier: 157370559
GI number: 157370559
Start: 2530400
End: 2532607
Strand: Direct
Name: iorB [H]
Synonym: Spro_2319
Alternate gene names: 157370559
Gene position: 2530400-2532607 (Clockwise)
Preceding gene: 157370557
Following gene: 157370560
Centisome position: 46.44
GC content: 61.28
Gene sequence:
>2208_bases ATGAATCTACCCGAAGTCCCGCTTACCCGGCGGCGTTTTATCGTCGGCGCCAGTGCTCTGGTGATCGGTGCGTATCTGCC GTCTACCGGTGCGCTGGCCCGAGCCAACTCCGCCACGGCGCCTGAAAACAATCCTCATGCAGCCAATGCCTTCGTGCAGA TTGATCAGGAAGGCATTGTCACCGTTATCAGTAAACATACCGAGGTGGGCCAGGGGGTGTATACCGGCATGGCGACATTG GTCGCCGAAGAGCTGGACGCCGATTGGTCGCAGGTGCGGGTGGTTGCCGCGCCGGTTGATACCAACGTCTATAAAAATCT GTCGTTCGGTTTCCAGGGCACCGGTGGCTCCAGTTCGGTGGCCAATGCCTATGAGCAGATGCGTCGTATGGGGGCCATGG CGCGTGCAATGCTGGTGCAGGCCGCCGCGCAAAGTTGGAAAACCTCCGCGCAGGAAATTACCGTGCAGGCGGGCAAGATC CGCCATGCCGCCAGTGGGCGTGAAGCGGGCTTCGGCGAGTTTGCCGTATTGGCCAGCCAGTTACCGCCACCCGACCCCGC GACTCTGACACTGAAAGATCCCGCCAATTTTACATTGATCGGCAAGGCCAGCGGCCTGCACCGGGTGGATTCGCTGGCCA AAACCAACGGTTCGGCGCAATTCACTCAGGACATTCATGAGCCGGATATGTTGACCGTGACCATCAAAAAGCCACCGCGT TTCGGCGGCAAGGTGGCCTCATTTGACGCCAGTCGGGCGCTGGCGGTAGCGGGCGTCGTGGCGGTGAAGCAGACCGATAC CGGCGTGGCGGTGTACGCCAAAAATACCTGGGCGGCGATCCAGGGGCGTGAAAAATTACAGGTGGAGTGGGACGACTCGC AGGCCGAGCGGCGCAACACCGAGCAGATTTTCGCCGAGTTCCGCCAGGTGGCGCAAAAGCCCGGTGCGGTGGCGAAAAGT CACGGCCAGCCGGACGAGGTTTTTGATAAAGCAGACAAAGTGATCGAAGCGGAATACACCTTCCCGTATGTGGCCCATGC GCCGATGGAGCCGTTGGACGGCTATCTGTTCTGGGACGGCGAAAGCGTCAAGGCGCGTTATGGCTGCCAGATCCAAACCC TCGATCATCAGCAACTGTGCGATCTGTTCCAATTGCCGCCGGAGAAGGTAGAAATTGAAACCATTTTAGCCGGCGGCAGC TTTGGTCGCCGTATCGATCTGGGCAACCCGAAGCTGGGGCCGGATCTGGCCGCAGACATGGCGGCGGCCGCCAAGGCGAT TGGTCCTGGGCACGGGGTGAAGGTGGTGTGGACGCGTGAAGACGATATCCGCAACGGCTGGTATCGCCCGATGATCCTGC ACCGGCTGCGCGGGGCGATCCGCGGCGGCAAGGTGGTGGGCTGGAGCGATACCGTCGTCGGCCATTCCTGGACGCTCAAC AGTGCGATGACTGCACTGGTGGTTAACGGTGTCGATCAGATGATGATCGAAGGTGCCAGCGAAGTTCCTTATACCTTCGA GAGTTTCCGCTGCGACGCCCATATCGTGCCGGGCAAGGTACCCACTACCTCACTGAGGTCGGTGGCCAGTACCCACACCG GCCACGCGGTGGAAAGCTTTATCGACCAACTGTTGCAGGAAACCGGGCAGGATCCGGTAGAGGGGCGATTGGCACTGATG GGGGATGCGCCGCGTGAGGCTGGCGTATTACGGGCGGTGGCGAAAGCCGCTAACTGGCAGGGCGCGAAGGTGGTGGATGG CCGGGCGCGGGGGGTTGGCGTCGCCAAGGCGTTTAATACCCGGGTGGCGCAGATTGCCGAGGTGTCGATCGGCGAAGGCG GCATTCCACGGGTGCACAAGGTGTGGTGTGCGGTGGACTGCGGCGTCGCGGTCAATCCGGATGTGATCCGCGCGCAGATT GAAGGCGGCATTGGCTACGGTCTGAGCATCGCACTGTACGGCAACATTACGCTAAAAGACGGGGTGGTTGAGCAGTCCAA CTTCAACAATTTCCGCCCGCTGCGTATCGATGAAATGCCGGAAATAGAGGTGATTATCGTGCCTTCCAGCGAGGCCCCGA CCGGCGTGGGTGAACTGGGTGTGCCGACCATTGCCCCGGCGGTCGGGAATGCTCTGGCGCTGCTCGGGCGGCCCCGCAGT TCACTGAGCCTGCCTTTACACCGTCCCAACAGTGACGCCAGCGTCTGA
Upstream 100 bases:
>100_bases AACTATTAGCCCGTCGCGCTGGTGTATGCAGACGGCGCGCATAAAAAGAATGATTTCGCCGCATTGATTAAGGTTGATCG GCATTTTGGAGCGATGAGCA
Downstream 100 bases:
>100_bases CAAGGAGAACAGCATGATAACTTTAACCGTGAACGACCAACCGCTGACGTTTGATGGCGACCCGCATATGCCGCTGCTGT GGTTCCTGCGTGATGAAGCC
Product: aldehyde oxidase and xanthine dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 735; Mature: 735
Protein sequence:
>735_residues MNLPEVPLTRRRFIVGASALVIGAYLPSTGALARANSATAPENNPHAANAFVQIDQEGIVTVISKHTEVGQGVYTGMATL VAEELDADWSQVRVVAAPVDTNVYKNLSFGFQGTGGSSSVANAYEQMRRMGAMARAMLVQAAAQSWKTSAQEITVQAGKI RHAASGREAGFGEFAVLASQLPPPDPATLTLKDPANFTLIGKASGLHRVDSLAKTNGSAQFTQDIHEPDMLTVTIKKPPR FGGKVASFDASRALAVAGVVAVKQTDTGVAVYAKNTWAAIQGREKLQVEWDDSQAERRNTEQIFAEFRQVAQKPGAVAKS HGQPDEVFDKADKVIEAEYTFPYVAHAPMEPLDGYLFWDGESVKARYGCQIQTLDHQQLCDLFQLPPEKVEIETILAGGS FGRRIDLGNPKLGPDLAADMAAAAKAIGPGHGVKVVWTREDDIRNGWYRPMILHRLRGAIRGGKVVGWSDTVVGHSWTLN SAMTALVVNGVDQMMIEGASEVPYTFESFRCDAHIVPGKVPTTSLRSVASTHTGHAVESFIDQLLQETGQDPVEGRLALM GDAPREAGVLRAVAKAANWQGAKVVDGRARGVGVAKAFNTRVAQIAEVSIGEGGIPRVHKVWCAVDCGVAVNPDVIRAQI EGGIGYGLSIALYGNITLKDGVVEQSNFNNFRPLRIDEMPEIEVIIVPSSEAPTGVGELGVPTIAPAVGNALALLGRPRS SLSLPLHRPNSDASV
Sequences:
>Translated_735_residues MNLPEVPLTRRRFIVGASALVIGAYLPSTGALARANSATAPENNPHAANAFVQIDQEGIVTVISKHTEVGQGVYTGMATL VAEELDADWSQVRVVAAPVDTNVYKNLSFGFQGTGGSSSVANAYEQMRRMGAMARAMLVQAAAQSWKTSAQEITVQAGKI RHAASGREAGFGEFAVLASQLPPPDPATLTLKDPANFTLIGKASGLHRVDSLAKTNGSAQFTQDIHEPDMLTVTIKKPPR FGGKVASFDASRALAVAGVVAVKQTDTGVAVYAKNTWAAIQGREKLQVEWDDSQAERRNTEQIFAEFRQVAQKPGAVAKS HGQPDEVFDKADKVIEAEYTFPYVAHAPMEPLDGYLFWDGESVKARYGCQIQTLDHQQLCDLFQLPPEKVEIETILAGGS FGRRIDLGNPKLGPDLAADMAAAAKAIGPGHGVKVVWTREDDIRNGWYRPMILHRLRGAIRGGKVVGWSDTVVGHSWTLN SAMTALVVNGVDQMMIEGASEVPYTFESFRCDAHIVPGKVPTTSLRSVASTHTGHAVESFIDQLLQETGQDPVEGRLALM GDAPREAGVLRAVAKAANWQGAKVVDGRARGVGVAKAFNTRVAQIAEVSIGEGGIPRVHKVWCAVDCGVAVNPDVIRAQI EGGIGYGLSIALYGNITLKDGVVEQSNFNNFRPLRIDEMPEIEVIIVPSSEAPTGVGELGVPTIAPAVGNALALLGRPRS SLSLPLHRPNSDASV >Mature_735_residues MNLPEVPLTRRRFIVGASALVIGAYLPSTGALARANSATAPENNPHAANAFVQIDQEGIVTVISKHTEVGQGVYTGMATL VAEELDADWSQVRVVAAPVDTNVYKNLSFGFQGTGGSSSVANAYEQMRRMGAMARAMLVQAAAQSWKTSAQEITVQAGKI RHAASGREAGFGEFAVLASQLPPPDPATLTLKDPANFTLIGKASGLHRVDSLAKTNGSAQFTQDIHEPDMLTVTIKKPPR FGGKVASFDASRALAVAGVVAVKQTDTGVAVYAKNTWAAIQGREKLQVEWDDSQAERRNTEQIFAEFRQVAQKPGAVAKS HGQPDEVFDKADKVIEAEYTFPYVAHAPMEPLDGYLFWDGESVKARYGCQIQTLDHQQLCDLFQLPPEKVEIETILAGGS FGRRIDLGNPKLGPDLAADMAAAAKAIGPGHGVKVVWTREDDIRNGWYRPMILHRLRGAIRGGKVVGWSDTVVGHSWTLN SAMTALVVNGVDQMMIEGASEVPYTFESFRCDAHIVPGKVPTTSLRSVASTHTGHAVESFIDQLLQETGQDPVEGRLALM GDAPREAGVLRAVAKAANWQGAKVVDGRARGVGVAKAFNTRVAQIAEVSIGEGGIPRVHKVWCAVDCGVAVNPDVIRAQI EGGIGYGLSIALYGNITLKDGVVEQSNFNNFRPLRIDEMPEIEVIIVPSSEAPTGVGELGVPTIAPAVGNALALLGRPRS SLSLPLHRPNSDASV
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 78385; Mature: 78385
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLPEVPLTRRRFIVGASALVIGAYLPSTGALARANSATAPENNPHAANAFVQIDQEGIV CCCCCCCCCHHHEEEECHHHEEEEECCCCCCEECCCCCCCCCCCCCCCCEEEEECCCCEE TVISKHTEVGQGVYTGMATLVAEELDADWSQVRVVAAPVDTNVYKNLSFGFQGTGGSSSV EEEHHCCHHCCHHHHHHHHHHHHHHCCCCHHEEEEEECCCCCHHHCCCCCCCCCCCCHHH ANAYEQMRRMGAMARAMLVQAAAQSWKTSAQEITVQAGKIRHAASGREAGFGEFAVLASQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCEEECCCCCCCCCCHHHHHHHC LPPPDPATLTLKDPANFTLIGKASGLHRVDSLAKTNGSAQFTQDIHEPDMLTVTIKKPPR CCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHCCCCCHHHHHCCCCCEEEEEEECCCC FGGKVASFDASRALAVAGVVAVKQTDTGVAVYAKNTWAAIQGREKLQVEWDDSQAERRNT CCCEEECCCCHHHHHHEEEEEEEECCCCEEEEECCCEEEECCCCEEEEEECCCHHHHCCH EQIFAEFRQVAQKPGAVAKSHGQPDEVFDKADKVIEAEYTFPYVAHAPMEPLDGYLFWDG HHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHEEEEECCCCEEECCCCCCCCCEEEECC ESVKARYGCQIQTLDHQQLCDLFQLPPEKVEIETILAGGSFGRRIDLGNPKLGPDLAADM CCCEEEECEEEEECCHHHHHHHHCCCCCCEEEEEEEECCCCCCEEECCCCCCCCHHHHHH AAAAKAIGPGHGVKVVWTREDDIRNGWYRPMILHRLRGAIRGGKVVGWSDTVVGHSWTLN HHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCEEHH SAMTALVVNGVDQMMIEGASEVPYTFESFRCDAHIVPGKVPTTSLRSVASTHTGHAVESF HHHHHHHHHCHHHHHHCCCCCCCEEHHHHCCCEEECCCCCCCHHHHHHHHCCCCHHHHHH IDQLLQETGQDPVEGRLALMGDAPREAGVLRAVAKAANWQGAKVVDGRARGVGVAKAFNT HHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEECCCCCCEEHHHHHHH RVAQIAEVSIGEGGIPRVHKVWCAVDCGVAVNPDVIRAQIEGGIGYGLSIALYGNITLKD HHHHHEEEECCCCCCCHHEEEEEEEECCCCCCCCEEEEEECCCCCCCEEEEEEEEEEEEC GVVEQSNFNNFRPLRIDEMPEIEVIIVPSSEAPTGVGELGVPTIAPAVGNALALLGRPRS CEEECCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCHHHHHCCCCC SLSLPLHRPNSDASV CCCCCEECCCCCCCC >Mature Secondary Structure MNLPEVPLTRRRFIVGASALVIGAYLPSTGALARANSATAPENNPHAANAFVQIDQEGIV CCCCCCCCCHHHEEEECHHHEEEEECCCCCCEECCCCCCCCCCCCCCCCEEEEECCCCEE TVISKHTEVGQGVYTGMATLVAEELDADWSQVRVVAAPVDTNVYKNLSFGFQGTGGSSSV EEEHHCCHHCCHHHHHHHHHHHHHHCCCCHHEEEEEECCCCCHHHCCCCCCCCCCCCHHH ANAYEQMRRMGAMARAMLVQAAAQSWKTSAQEITVQAGKIRHAASGREAGFGEFAVLASQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCEEECCCCCCCCCCHHHHHHHC LPPPDPATLTLKDPANFTLIGKASGLHRVDSLAKTNGSAQFTQDIHEPDMLTVTIKKPPR CCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHCCCCCHHHHHCCCCCEEEEEEECCCC FGGKVASFDASRALAVAGVVAVKQTDTGVAVYAKNTWAAIQGREKLQVEWDDSQAERRNT CCCEEECCCCHHHHHHEEEEEEEECCCCEEEEECCCEEEECCCCEEEEEECCCHHHHCCH EQIFAEFRQVAQKPGAVAKSHGQPDEVFDKADKVIEAEYTFPYVAHAPMEPLDGYLFWDG HHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHEEEEECCCCEEECCCCCCCCCEEEECC ESVKARYGCQIQTLDHQQLCDLFQLPPEKVEIETILAGGSFGRRIDLGNPKLGPDLAADM CCCEEEECEEEEECCHHHHHHHHCCCCCCEEEEEEEECCCCCCEEECCCCCCCCHHHHHH AAAAKAIGPGHGVKVVWTREDDIRNGWYRPMILHRLRGAIRGGKVVGWSDTVVGHSWTLN HHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCEEHH SAMTALVVNGVDQMMIEGASEVPYTFESFRCDAHIVPGKVPTTSLRSVASTHTGHAVESF HHHHHHHHHCHHHHHHCCCCCCCEEHHHHCCCEEECCCCCCCHHHHHHHHCCCCHHHHHH IDQLLQETGQDPVEGRLALMGDAPREAGVLRAVAKAANWQGAKVVDGRARGVGVAKAFNT HHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEECCCCCCEEHHHHHHH RVAQIAEVSIGEGGIPRVHKVWCAVDCGVAVNPDVIRAQIEGGIGYGLSIALYGNITLKD HHHHHEEEECCCCCCCHHEEEEEEEECCCCCCCCEEEEEECCCCCCCEEEEEEEEEEEEC GVVEQSNFNNFRPLRIDEMPEIEVIIVPSSEAPTGVGELGVPTIAPAVGNALALLGRPRS CEEECCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCHHHHHCCCCC SLSLPLHRPNSDASV CCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]