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The map label for this gene is ycjN [C]

Identifier: 157370537

GI number: 157370537

Start: 2499917

End: 2501167

Strand: Reverse

Name: ycjN [C]

Synonym: Spro_2297

Alternate gene names: 157370537

Gene position: 2501167-2499917 (Counterclockwise)

Preceding gene: 157370543

Following gene: 157370536

Centisome position: 45.9

GC content: 58.43

Gene sequence:

>1251_bases
ATGAAAAGCCATACCCTTGCCGCTACGGCAGTCTGTACCCTGTCGCTCCTGGCGCTTAGCCTGTCATCTGCCTATGCCGC
CCCGACGCAAATTAACGCGTTGTTTATGACCCAGGCGGCGTACAGCGAAAATGATATCCGTGCCATGACCGCCGATTTTA
GCAAGCAGCACCCGGATATCACCGTTAACCTGGAGTTCGTTCCTTACGAGGCGCTGCACGATAAAATCGTCGCGGCGCGC
GGTGCCGGCAGTAACGGCTACGATGTGGTGCTGTTCGACGCCATCTGGCCGGCAGAATTCACCAAGTTCGGCCTGCTGCA
GGACGTAACCTCGCGCATCAGCGCCGACGACAGCGCCAAAATCTTTGCCGGCGCCATGACCACCGTCACCTATAAGGACA
AGCGCTGGGGCATGCCGTGGATCCTCGACACCAAATACCTGTATTACAACAAAGCCATGCTGGCCAAGGCCGGGATTGCC
GCCCCGCCGAAAACCTGGCAGGAACTGGCGCAGCAGGCAGAGATCCTGAAGCAAAAAAACGTGGTCAAATACCCGCTGGT
ATGGAGCTGGTCACAGGCCGAGGCACTGGTTTGCGATTACACCACCCTGGTGTCTGCCTATAAGGGGCAGTTTATCCAGC
AGGGGAAAATCACCTTCTCCAGCCCAGGTTCACTGCAGGCCGTCGACTATATGAAAGCGTCGCTGGACAAGGGGCTGACC
AATCCGAACTCCCGCGAATATCTGGAAGAGGACGTGCGCAAAGCGTTTTCCAACGGTGACGCGGCCTTCGCCCTTAACTG
GACCTACATGTACAACATGGCCAACGATCCCAAGCAAAGCAAAGTGGCCGGTGACGTCGGCATCGTGCCGGCTCCGGGAT
CGGTGGCGGGTCAGGTCTCTGCGGTTAACGGTTCGATGGGGCTAGGCATCGCCAAGGCCAGCGCCCACCCCGATCAGGCC
TGGCAATACATCAGCTACATGACCTCACAGCCGGTGCAGGACAAATACGCCAAACTAAGCCTGCCGATCTGGAAGTCGTC
TTACGACGATCCGACGGTGCAGAAGGGTCAGGAGCCGTTAATCGCCGCCGCCAAACAGTCGTTGAACGTGATGCTGTCGC
GCCCTGAAACCGCCGATTACTCTCGTTTGTCCAACGGCCTGCAACAGGACTTGCAGCAAATTCTGCAGGGCAAGGTAACG
CCGCAGGCCGGGCTGGATGCGGCCACCCAAAGCGCTGCGCGGCTACGTTAA

Upstream 100 bases:

>100_bases
AACTGCCTATGCAGAAAGGGAAATCGTCTTTGCAGTATGGTGCCCTCCAATAAAGCAATCAAATTGATTTAAGAATCTTT
TTAACACCGGAGAACGCACA

Downstream 100 bases:

>100_bases
GCGATGACGATGCTCACTTTACCTCAACGTGAGCGGCGTCAGGCATGGGTGCTGCTGGCACCCATGCTGCTGATGATGCT
GCTGTTAACCGCCTGGCCGC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MKSHTLAATAVCTLSLLALSLSSAYAAPTQINALFMTQAAYSENDIRAMTADFSKQHPDITVNLEFVPYEALHDKIVAAR
GAGSNGYDVVLFDAIWPAEFTKFGLLQDVTSRISADDSAKIFAGAMTTVTYKDKRWGMPWILDTKYLYYNKAMLAKAGIA
APPKTWQELAQQAEILKQKNVVKYPLVWSWSQAEALVCDYTTLVSAYKGQFIQQGKITFSSPGSLQAVDYMKASLDKGLT
NPNSREYLEEDVRKAFSNGDAAFALNWTYMYNMANDPKQSKVAGDVGIVPAPGSVAGQVSAVNGSMGLGIAKASAHPDQA
WQYISYMTSQPVQDKYAKLSLPIWKSSYDDPTVQKGQEPLIAAAKQSLNVMLSRPETADYSRLSNGLQQDLQQILQGKVT
PQAGLDAATQSAARLR

Sequences:

>Translated_416_residues
MKSHTLAATAVCTLSLLALSLSSAYAAPTQINALFMTQAAYSENDIRAMTADFSKQHPDITVNLEFVPYEALHDKIVAAR
GAGSNGYDVVLFDAIWPAEFTKFGLLQDVTSRISADDSAKIFAGAMTTVTYKDKRWGMPWILDTKYLYYNKAMLAKAGIA
APPKTWQELAQQAEILKQKNVVKYPLVWSWSQAEALVCDYTTLVSAYKGQFIQQGKITFSSPGSLQAVDYMKASLDKGLT
NPNSREYLEEDVRKAFSNGDAAFALNWTYMYNMANDPKQSKVAGDVGIVPAPGSVAGQVSAVNGSMGLGIAKASAHPDQA
WQYISYMTSQPVQDKYAKLSLPIWKSSYDDPTVQKGQEPLIAAAKQSLNVMLSRPETADYSRLSNGLQQDLQQILQGKVT
PQAGLDAATQSAARLR
>Mature_416_residues
MKSHTLAATAVCTLSLLALSLSSAYAAPTQINALFMTQAAYSENDIRAMTADFSKQHPDITVNLEFVPYEALHDKIVAAR
GAGSNGYDVVLFDAIWPAEFTKFGLLQDVTSRISADDSAKIFAGAMTTVTYKDKRWGMPWILDTKYLYYNKAMLAKAGIA
APPKTWQELAQQAEILKQKNVVKYPLVWSWSQAEALVCDYTTLVSAYKGQFIQQGKITFSSPGSLQAVDYMKASLDKGLT
NPNSREYLEEDVRKAFSNGDAAFALNWTYMYNMANDPKQSKVAGDVGIVPAPGSVAGQVSAVNGSMGLGIAKASAHPDQA
WQYISYMTSQPVQDKYAKLSLPIWKSSYDDPTVQKGQEPLIAAAKQSLNVMLSRPETADYSRLSNGLQQDLQQILQGKVT
PQAGLDAATQSAARLR

Specific function: Probably part of a binding-protein-dependent transport system [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1787569, Length=342, Percent_Identity=25.7309941520468, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 45393; Mature: 45393

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSHTLAATAVCTLSLLALSLSSAYAAPTQINALFMTQAAYSENDIRAMTADFSKQHPDI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCEEEECHHHCCCCCE
TVNLEFVPYEALHDKIVAARGAGSNGYDVVLFDAIWPAEFTKFGLLQDVTSRISADDSAK
EEEEEECCHHHHHHHHHEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCE
IFAGAMTTVTYKDKRWGMPWILDTKYLYYNKAMLAKAGIAAPPKTWQELAQQAEILKQKN
EEEEEEEEEEECCCCCCCCEEEECEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
VVKYPLVWSWSQAEALVCDYTTLVSAYKGQFIQQGKITFSSPGSLQAVDYMKASLDKGLT
CEECCEEEECCCCCEEEHHHHHHHHHHHCCCEECCEEEECCCCCCHHHHHHHHHHHHCCC
NPNSREYLEEDVRKAFSNGDAAFALNWTYMYNMANDPKQSKVAGDVGIVPAPGSVAGQVS
CCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCHHHCCCCCCEECCCCCCCCEEE
AVNGSMGLGIAKASAHPDQAWQYISYMTSQPVQDKYAKLSLPIWKSSYDDPTVQKGQEPL
EECCCCCCEEEECCCCHHHHHHHHHHHHCCCCHHHHHEEECCHHCCCCCCCHHHCCCCHH
IAAAKQSLNVMLSRPETADYSRLSNGLQQDLQQILQGKVTPQAGLDAATQSAARLR
HHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MKSHTLAATAVCTLSLLALSLSSAYAAPTQINALFMTQAAYSENDIRAMTADFSKQHPDI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCEEEECHHHCCCCCE
TVNLEFVPYEALHDKIVAARGAGSNGYDVVLFDAIWPAEFTKFGLLQDVTSRISADDSAK
EEEEEECCHHHHHHHHHEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCE
IFAGAMTTVTYKDKRWGMPWILDTKYLYYNKAMLAKAGIAAPPKTWQELAQQAEILKQKN
EEEEEEEEEEECCCCCCCCEEEECEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
VVKYPLVWSWSQAEALVCDYTTLVSAYKGQFIQQGKITFSSPGSLQAVDYMKASLDKGLT
CEECCEEEECCCCCEEEHHHHHHHHHHHCCCEECCEEEECCCCCCHHHHHHHHHHHHCCC
NPNSREYLEEDVRKAFSNGDAAFALNWTYMYNMANDPKQSKVAGDVGIVPAPGSVAGQVS
CCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCHHHCCCCCCEECCCCCCCCEEE
AVNGSMGLGIAKASAHPDQAWQYISYMTSQPVQDKYAKLSLPIWKSSYDDPTVQKGQEPL
EECCCCCCEEEECCCCHHHHHHHHHHHHCCCCHHHHHEEECCHHCCCCCCCHHHCCCCHH
IAAAKQSLNVMLSRPETADYSRLSNGLQQDLQQILQGKVTPQAGLDAATQSAARLR
HHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]