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The map label for this gene is ycjO [C]

Identifier: 157370536

GI number: 157370536

Start: 2498999

End: 2499913

Strand: Reverse

Name: ycjO [C]

Synonym: Spro_2296

Alternate gene names: 157370536

Gene position: 2499913-2498999 (Counterclockwise)

Preceding gene: 157370537

Following gene: 157370535

Centisome position: 45.88

GC content: 61.2

Gene sequence:

>915_bases
ATGACGATGCTCACTTTACCTCAACGTGAGCGGCGTCAGGCATGGGTGCTGCTGGCACCCATGCTGCTGATGATGCTGCT
GTTAACCGCCTGGCCGCTGGCACGCACCCTGTGGCTGAGCTTCACCGATGCGGCGCTGGTGGGCGACGGCGTAACCCCGG
CCTGGGTCGGTACCGATAACTTTTTTTACGCTCTGACCGACCCGGACTTCCAGGCCGCACTGGGGCGCACGCTGTATTTC
ACCCTGGTTTCGGTGGCGTTCGAAGGGGTGATCGGCGTGCTGGTGGCGCTGCTGCTCAACCAAAAATTCCACGGCCGTAA
TGTTCTGCGGGTGCTGGTTATTTTGCCCTGGGCGCTACCGACCATCGTCAACGCCACCATGTGGCGGCTGAACTTCAACC
CGGATTACGGCAGCATCAACGCGCTGTTAACCCAGCTCGGGGTGATTGACCACTACCGCAGCTGGCTGGGTGACCCGGCG
TCGGCGCTCAACGCGGTGATGCTGGCGGATATTTGGAAGAACTACCCGCTGATTACCCTGCTGACGCTGGCGGCGTTGCA
ATCGATCCCGGACGATTTGTACGAAGCGGCGCGGCTGGACGGAGCCTCTGCCTGGCGGCGCTTCCGGGCCATCACCCTGC
CCGCCATTCTGGCCCCGCTGGCGGTGGCGTTGGTGCTGCGTACCATTGATGCCTTCAAGGTGTTCGACATCATTTACGTG
ATGACGCGCGGCGGCCCCATGGACAGTACCAAGACCCTCAGCTTCTTCGTTTACCAGGAGTCATTCAGCTATCTGCGGGC
CGGCAGCGGCGCAGCCTACGCGGTATTGATGACCTTGCTATGCGGCCTGCTGATCGCGTTGTACATGCTGATGCTGTTCC
GTCAACGCAGAAGGAACCTCGCCGATGAAGCGTAA

Upstream 100 bases:

>100_bases
CGGCCTGCAACAGGACTTGCAGCAAATTCTGCAGGGCAAGGTAACGCCGCAGGCCGGGCTGGATGCGGCCACCCAAAGCG
CTGCGCGGCTACGTTAAGCG

Downstream 100 bases:

>100_bases
AATCCGCCTGGTATTGCGCTACGCTGCCGCATTGCTACTGGCGTTGTCGATCCTGGCGCCGATGCTGTGGCTGTTTTTGA
TGAGCGTCAGTTCCTCGGCC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MTMLTLPQRERRQAWVLLAPMLLMMLLLTAWPLARTLWLSFTDAALVGDGVTPAWVGTDNFFYALTDPDFQAALGRTLYF
TLVSVAFEGVIGVLVALLLNQKFHGRNVLRVLVILPWALPTIVNATMWRLNFNPDYGSINALLTQLGVIDHYRSWLGDPA
SALNAVMLADIWKNYPLITLLTLAALQSIPDDLYEAARLDGASAWRRFRAITLPAILAPLAVALVLRTIDAFKVFDIIYV
MTRGGPMDSTKTLSFFVYQESFSYLRAGSGAAYAVLMTLLCGLLIALYMLMLFRQRRRNLADEA

Sequences:

>Translated_304_residues
MTMLTLPQRERRQAWVLLAPMLLMMLLLTAWPLARTLWLSFTDAALVGDGVTPAWVGTDNFFYALTDPDFQAALGRTLYF
TLVSVAFEGVIGVLVALLLNQKFHGRNVLRVLVILPWALPTIVNATMWRLNFNPDYGSINALLTQLGVIDHYRSWLGDPA
SALNAVMLADIWKNYPLITLLTLAALQSIPDDLYEAARLDGASAWRRFRAITLPAILAPLAVALVLRTIDAFKVFDIIYV
MTRGGPMDSTKTLSFFVYQESFSYLRAGSGAAYAVLMTLLCGLLIALYMLMLFRQRRRNLADEA
>Mature_303_residues
TMLTLPQRERRQAWVLLAPMLLMMLLLTAWPLARTLWLSFTDAALVGDGVTPAWVGTDNFFYALTDPDFQAALGRTLYFT
LVSVAFEGVIGVLVALLLNQKFHGRNVLRVLVILPWALPTIVNATMWRLNFNPDYGSINALLTQLGVIDHYRSWLGDPAS
ALNAVMLADIWKNYPLITLLTLAALQSIPDDLYEAARLDGASAWRRFRAITLPAILAPLAVALVLRTIDAFKVFDIIYVM
TRGGPMDSTKTLSFFVYQESFSYLRAGSGAAYAVLMTLLCGLLIALYMLMLFRQRRRNLADEA

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=272, Percent_Identity=34.5588235294118, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1789861, Length=286, Percent_Identity=33.5664335664336, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1790465, Length=254, Percent_Identity=32.2834645669291, Blast_Score=115, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33970; Mature: 33838

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMLTLPQRERRQAWVLLAPMLLMMLLLTAWPLARTLWLSFTDAALVGDGVTPAWVGTDN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCC
FFYALTDPDFQAALGRTLYFTLVSVAFEGVIGVLVALLLNQKFHGRNVLRVLVILPWALP
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
TIVNATMWRLNFNPDYGSINALLTQLGVIDHYRSWLGDPASALNAVMLADIWKNYPLITL
HHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHH
LTLAALQSIPDDLYEAARLDGASAWRRFRAITLPAILAPLAVALVLRTIDAFKVFDIIYV
HHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTRGGPMDSTKTLSFFVYQESFSYLRAGSGAAYAVLMTLLCGLLIALYMLMLFRQRRRNL
HCCCCCCCCCHHHEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ADEA
CCCC
>Mature Secondary Structure 
TMLTLPQRERRQAWVLLAPMLLMMLLLTAWPLARTLWLSFTDAALVGDGVTPAWVGTDN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCC
FFYALTDPDFQAALGRTLYFTLVSVAFEGVIGVLVALLLNQKFHGRNVLRVLVILPWALP
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
TIVNATMWRLNFNPDYGSINALLTQLGVIDHYRSWLGDPASALNAVMLADIWKNYPLITL
HHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHH
LTLAALQSIPDDLYEAARLDGASAWRRFRAITLPAILAPLAVALVLRTIDAFKVFDIIYV
HHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTRGGPMDSTKTLSFFVYQESFSYLRAGSGAAYAVLMTLLCGLLIALYMLMLFRQRRRNL
HCCCCCCCCCHHHEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ADEA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA