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The map label for this gene is rnfA

Identifier: 157370481

GI number: 157370481

Start: 2441743

End: 2442324

Strand: Reverse

Name: rnfA

Synonym: Spro_2241

Alternate gene names: 157370481

Gene position: 2442324-2441743 (Counterclockwise)

Preceding gene: 157370482

Following gene: 157370480

Centisome position: 44.82

GC content: 56.36

Gene sequence:

>582_bases
ATGACCGAATACCTGCTCCTGTTTGTCGGCACCGTACTGGTGAATAACTTCGTCCTGGTGAAGTTTCTTGGCCTGTGCCC
ATTCCTCGGCGTTTCCAAAAAGCTGGAAAGCGCCATTGGCATGGGGATGGCCACCACTTTTGTTATGACGTTGGCCTCGG
TCAGCGCCTGGGTGATTAACACCTTTATTCTGGTTCCGTTGGATCTGGTGTACCTGCGCACGCTGTCATTTATTTTAGTG
ATCGCCGTGGTGGTGCAATTTACCGAGATGGTGGTACGCAAAACCAGCCCGGCCCTGTATCGCCTGCTGGGTATTTTCCT
GCCGCTGATCACCACCAACTGTGCGGTGCTCGGCGTCGCACTGCTCAACGTCAACCTCGGCTACAATTTCCTGCAGTCTG
CGGTATACGGCTTCAGCGCCGCCGCGGGCTTCTCATTGGTGATGGTGCTGTTTGCCGCCATCCGTGAACGTCTGGCGGTA
GCCGATGTGCCTGCGCCCTTCCGGGGCTCTTCCATCGCACTGATCACCGCCGGGCTGATGTCGCTGGCCTTTATGGGCTT
TACCGGGCTGGTGAAATTCTAA

Upstream 100 bases:

>100_bases
CCAAAAACAGGCAAAAAGGGTAATAACCCTGCTATCCCTATGTTGTGGTCAGGCCGCCAATTCCCGATAATAGGCGGCTT
TTATTTTTTTAGGCATCGCA

Downstream 100 bases:

>100_bases
TGACCGCGTTATGGATTGCGATTGCCGCGTTAAGCGCCCTTGGCCTGCTGTTCGGTCTGGTGCTGGGCTATGCTGCGCGC
CGCTTTGAAGTGGAAGAAGA

Product: RnfABCDGE type electron transport complex subunit A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MTEYLLLFVGTVLVNNFVLVKFLGLCPFLGVSKKLESAIGMGMATTFVMTLASVSAWVINTFILVPLDLVYLRTLSFILV
IAVVVQFTEMVVRKTSPALYRLLGIFLPLITTNCAVLGVALLNVNLGYNFLQSAVYGFSAAAGFSLVMVLFAAIRERLAV
ADVPAPFRGSSIALITAGLMSLAFMGFTGLVKF

Sequences:

>Translated_193_residues
MTEYLLLFVGTVLVNNFVLVKFLGLCPFLGVSKKLESAIGMGMATTFVMTLASVSAWVINTFILVPLDLVYLRTLSFILV
IAVVVQFTEMVVRKTSPALYRLLGIFLPLITTNCAVLGVALLNVNLGYNFLQSAVYGFSAAAGFSLVMVLFAAIRERLAV
ADVPAPFRGSSIALITAGLMSLAFMGFTGLVKF
>Mature_192_residues
TEYLLLFVGTVLVNNFVLVKFLGLCPFLGVSKKLESAIGMGMATTFVMTLASVSAWVINTFILVPLDLVYLRTLSFILVI
AVVVQFTEMVVRKTSPALYRLLGIFLPLITTNCAVLGVALLNVNLGYNFLQSAVYGFSAAAGFSLVMVLFAAIRERLAVA
DVPAPFRGSSIALITAGLMSLAFMGFTGLVKF

Specific function: May be part of a membrane complex involved in electron transport

COG id: COG4657

COG function: function code C; Predicted NADH:ubiquinone oxidoreductase, subunit RnfA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nqrDE/rnfAE family

Homologues:

Organism=Escherichia coli, GI1787914, Length=192, Percent_Identity=88.5416666666667, Blast_Score=342, Evalue=7e-96,
Organism=Escherichia coli, GI1787919, Length=162, Percent_Identity=31.4814814814815, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNFA_SERP5 (A8GE02)

Other databases:

- EMBL:   CP000826
- RefSeq:   YP_001478470.1
- STRING:   A8GE02
- GeneID:   5605143
- GenomeReviews:   CP000826_GR
- KEGG:   spe:Spro_2241
- eggNOG:   COG4657
- HOGENOM:   HBG624915
- OMA:   LRTIAFI
- BioCyc:   SPRO399741:SPRO_2241-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_00459
- InterPro:   IPR003667
- InterPro:   IPR011293
- PIRSF:   PIRSF006102
- TIGRFAMs:   TIGR01943

Pfam domain/function: PF02508 Rnf-Nqr

EC number: NA

Molecular weight: Translated: 20763; Mature: 20632

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x405628fc)-; HASH(0x247c1780)-; HASH(0x24dfd8f0)-; HASH(0x2566937c)-; HASH(0x256cca9c)-; HASH(0x256ccaa8)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEYLLLFVGTVLVNNFVLVKFLGLCPFLGVSKKLESAIGMGMATTFVMTLASVSAWVIN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
TFILVPLDLVYLRTLSFILVIAVVVQFTEMVVRKTSPALYRLLGIFLPLITTNCAVLGVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LLNVNLGYNFLQSAVYGFSAAAGFSLVMVLFAAIRERLAVADVPAPFRGSSIALITAGLM
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
SLAFMGFTGLVKF
HHHHHHHHHHHCH
>Mature Secondary Structure 
TEYLLLFVGTVLVNNFVLVKFLGLCPFLGVSKKLESAIGMGMATTFVMTLASVSAWVIN
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
TFILVPLDLVYLRTLSFILVIAVVVQFTEMVVRKTSPALYRLLGIFLPLITTNCAVLGVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LLNVNLGYNFLQSAVYGFSAAAGFSLVMVLFAAIRERLAVADVPAPFRGSSIALITAGLM
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
SLAFMGFTGLVKF
HHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA