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The map label for this gene is rnfB

Identifier: 157370480

GI number: 157370480

Start: 2441171

End: 2441743

Strand: Reverse

Name: rnfB

Synonym: Spro_2240

Alternate gene names: 157370480

Gene position: 2441743-2441171 (Counterclockwise)

Preceding gene: 157370481

Following gene: 157370479

Centisome position: 44.81

GC content: 59.69

Gene sequence:

>573_bases
ATGACCGCGTTATGGATTGCGATTGCCGCGTTAAGCGCCCTTGGCCTGCTGTTCGGTCTGGTGCTGGGCTATGCTGCGCG
CCGCTTTGAAGTGGAAGAAGATCCGGTGGCCGAACAGGTCGACGAAATCTTGCCACAGAGCCAGTGCGGCCAGTGCGGTT
ACCCCGGTTGCCGTCCTTATGCCGAAGCCGTCGCCAACGGTGAGATGATTAACAAATGCGCTCCGGGTGGCGAGCAGGTG
ATGCTGAAGCTGGCAGAATTGCTCAACGTCGAACCGCAGCCGCTCGGTAGCGAAGCCGCCGCCGAACCTGTGCGCCAGGT
GGCCTACATTGACGAAGCCAACTGCATCGGCTGCACCAAGTGCATTCAGGCCTGTCCGGTGGACGCCATCGTCGGCGCTA
CCCGCGCCATGCATACCGTCATTACCGATCTTTGTACCGGCTGCGACCTGTGCGTTGCGCCGTGCCCTACCGACTGTATT
GAAATGAGACCGGTCGCCACCACTACCGCCAACTGGAAGTGGGATATGAAGACGATACCGGTGCAAGTGATCCACGTGGA
GCAACATGCTTAA

Upstream 100 bases:

>100_bases
CCGATGTGCCTGCGCCCTTCCGGGGCTCTTCCATCGCACTGATCACCGCCGGGCTGATGTCGCTGGCCTTTATGGGCTTT
ACCGGGCTGGTGAAATTCTA

Downstream 100 bases:

>100_bases
TCTGTTCGCCGCCTTCAAAAAAGACCGGATTTGGGATTTCGACGGCGGGATCCATCCGCCGGAAATGAAGACCCAGTCCA
GCGGTGTCCCGCTGCGTACC

Product: electron transport complex protein RnfB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MTALWIAIAALSALGLLFGLVLGYAARRFEVEEDPVAEQVDEILPQSQCGQCGYPGCRPYAEAVANGEMINKCAPGGEQV
MLKLAELLNVEPQPLGSEAAAEPVRQVAYIDEANCIGCTKCIQACPVDAIVGATRAMHTVITDLCTGCDLCVAPCPTDCI
EMRPVATTTANWKWDMKTIPVQVIHVEQHA

Sequences:

>Translated_190_residues
MTALWIAIAALSALGLLFGLVLGYAARRFEVEEDPVAEQVDEILPQSQCGQCGYPGCRPYAEAVANGEMINKCAPGGEQV
MLKLAELLNVEPQPLGSEAAAEPVRQVAYIDEANCIGCTKCIQACPVDAIVGATRAMHTVITDLCTGCDLCVAPCPTDCI
EMRPVATTTANWKWDMKTIPVQVIHVEQHA
>Mature_189_residues
TALWIAIAALSALGLLFGLVLGYAARRFEVEEDPVAEQVDEILPQSQCGQCGYPGCRPYAEAVANGEMINKCAPGGEQVM
LKLAELLNVEPQPLGSEAAAEPVRQVAYIDEANCIGCTKCIQACPVDAIVGATRAMHTVITDLCTGCDLCVAPCPTDCIE
MRPVATTTANWKWDMKTIPVQVIHVEQHA

Specific function: May be part of a membrane complex involved in electron transport

COG id: COG2878

COG function: function code C; Predicted NADH:ubiquinone oxidoreductase, subunit RnfB

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains

Homologues:

Organism=Escherichia coli, GI1787915, Length=192, Percent_Identity=74.4791666666667, Blast_Score=298, Evalue=2e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNFB_SERP5 (A8GE01)

Other databases:

- EMBL:   CP000826
- RefSeq:   YP_001478469.1
- ProteinModelPortal:   A8GE01
- SMR:   A8GE01
- STRING:   A8GE01
- GeneID:   5605142
- GenomeReviews:   CP000826_GR
- KEGG:   spe:Spro_2240
- eggNOG:   COG2878
- HOGENOM:   HBG549899
- OMA:   KFKVEGD
- ProtClustDB:   PRK05113
- BioCyc:   SPRO399741:SPRO_2240-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_00463
- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR010207
- InterPro:   IPR016463
- InterPro:   IPR007202
- PIRSF:   PIRSF005784
- TIGRFAMs:   TIGR01944

Pfam domain/function: PF00037 Fer4; PF04060 FeS

EC number: NA

Molecular weight: Translated: 20317; Mature: 20186

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: PS00198 4FE4S_FER_1; PS51379 4FE4S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
10.0 %Cys+Met (Translated Protein)
6.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
9.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALWIAIAALSALGLLFGLVLGYAARRFEVEEDPVAEQVDEILPQSQCGQCGYPGCRPY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHCCCCCCCCCCHH
AEAVANGEMINKCAPGGEQVMLKLAELLNVEPQPLGSEAAAEPVRQVAYIDEANCIGCTK
HHHHHCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHH
CIQACPVDAIVGATRAMHTVITDLCTGCDLCVAPCPTDCIEMRPVATTTANWKWDMKTIP
HHHHCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHCCCCEECCCCCEECCEECC
VQVIHVEQHA
EEEEEECCCC
>Mature Secondary Structure 
TALWIAIAALSALGLLFGLVLGYAARRFEVEEDPVAEQVDEILPQSQCGQCGYPGCRPY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHCCCCCCCCCCHH
AEAVANGEMINKCAPGGEQVMLKLAELLNVEPQPLGSEAAAEPVRQVAYIDEANCIGCTK
HHHHHCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHH
CIQACPVDAIVGATRAMHTVITDLCTGCDLCVAPCPTDCIEMRPVATTTANWKWDMKTIP
HHHHCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHCCCCEECCCCCEECCEECC
VQVIHVEQHA
EEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA