| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is ydjM [H]
Identifier: 157370364
GI number: 157370364
Start: 2320423
End: 2320971
Strand: Reverse
Name: ydjM [H]
Synonym: Spro_2124
Alternate gene names: 157370364
Gene position: 2320971-2320423 (Counterclockwise)
Preceding gene: 157370365
Following gene: 157370363
Centisome position: 42.6
GC content: 56.28
Gene sequence:
>549_bases ATGACCGCGGAAGGACATCTTATTTTCTCTGTCGCTTGCGCGATTTTCGCCAAGAAGGCTGAGGTGACACCATCGCTTGC TACCGGCGACTGGTGGCATATTATCCCCGCCGCTCTGCTGACTTCGTTGCTGCCTGATATCGATCACCCCAAATCGGTGT TAGGCCAGCGCCTGCGCTGGATCGCCATTCCTATTTCACGCGCCTTCGGCCATCGCGGTTTTACTCATAGCCTGCTGGCG ATCGCCGGTGGCATGGCACTGTTCCAGCTTGACGTGCCGCGCAGTTGGCCGATCCCGCCGGATGTCCTGCATGCGATGAT TATCGGTTACTTCAGCCACCTGTTGGCAGATATGCTCACCCCCGCCGGCGTGCCCTTGCTTTGGCCCTGTCGCTGGCGTT TTCGCCTGCCGCTGCTAAATTCTCAGAAAGGCAACCAACTCGAGCGCGCTCTGTGCCTGTGTCTGGTGGCTTTTGCGATC TACTGGCAAGGCGGTTGCACCATTCCTGTGCAGTCCTATTTTGAACAAATAAAAAATATCAGACTGTGA
Upstream 100 bases:
>100_bases CCGTATAAAATAAACAATTGGTTACAGGGTAACTGCTTCCACTACTGGGAATTTTCCCATATACTGGATAAATTAACAGT TTATCAGCCGGAATTGCAGT
Downstream 100 bases:
>100_bases TCACAAAAAAACGGCCATTTAATATTCGCAAAGACTATTAATTAAACAAATCAGTCAACAAAGTTATATCAAATTCCATT TGGATATAAGTGAGCCGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MTAEGHLIFSVACAIFAKKAEVTPSLATGDWWHIIPAALLTSLLPDIDHPKSVLGQRLRWIAIPISRAFGHRGFTHSLLA IAGGMALFQLDVPRSWPIPPDVLHAMIIGYFSHLLADMLTPAGVPLLWPCRWRFRLPLLNSQKGNQLERALCLCLVAFAI YWQGGCTIPVQSYFEQIKNIRL
Sequences:
>Translated_182_residues MTAEGHLIFSVACAIFAKKAEVTPSLATGDWWHIIPAALLTSLLPDIDHPKSVLGQRLRWIAIPISRAFGHRGFTHSLLA IAGGMALFQLDVPRSWPIPPDVLHAMIIGYFSHLLADMLTPAGVPLLWPCRWRFRLPLLNSQKGNQLERALCLCLVAFAI YWQGGCTIPVQSYFEQIKNIRL >Mature_181_residues TAEGHLIFSVACAIFAKKAEVTPSLATGDWWHIIPAALLTSLLPDIDHPKSVLGQRLRWIAIPISRAFGHRGFTHSLLAI AGGMALFQLDVPRSWPIPPDVLHAMIIGYFSHLLADMLTPAGVPLLWPCRWRFRLPLLNSQKGNQLERALCLCLVAFAIY WQGGCTIPVQSYFEQIKNIRL
Specific function: Unknown
COG id: COG1988
COG function: function code R; Predicted membrane-bound metal-dependent hydrolases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yvsG [H]
Homologues:
Organism=Escherichia coli, GI226510947, Length=161, Percent_Identity=70.1863354037267, Blast_Score=246, Evalue=9e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007404 - InterPro: IPR016956 [H]
Pfam domain/function: PF04307 DUF457 [H]
EC number: NA
Molecular weight: Translated: 20304; Mature: 20173
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAEGHLIFSVACAIFAKKAEVTPSLATGDWWHIIPAALLTSLLPDIDHPKSVLGQRLRW CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH IAIPISRAFGHRGFTHSLLAIAGGMALFQLDVPRSWPIPPDVLHAMIIGYFSHLLADMLT HEEHHHHHHCCCCHHHHHHHHHCCHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHC PAGVPLLWPCRWRFRLPLLNSQKGNQLERALCLCLVAFAIYWQGGCTIPVQSYFEQIKNI CCCCCEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC RL CC >Mature Secondary Structure TAEGHLIFSVACAIFAKKAEVTPSLATGDWWHIIPAALLTSLLPDIDHPKSVLGQRLRW CCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH IAIPISRAFGHRGFTHSLLAIAGGMALFQLDVPRSWPIPPDVLHAMIIGYFSHLLADMLT HEEHHHHHHCCCCHHHHHHHHHCCHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHC PAGVPLLWPCRWRFRLPLLNSQKGNQLERALCLCLVAFAIYWQGGCTIPVQSYFEQIKNI CCCCCEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC RL CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]