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The map label for this gene is ydjN [H]

Identifier: 157370363

GI number: 157370363

Start: 2318847

End: 2320238

Strand: Reverse

Name: ydjN [H]

Synonym: Spro_2123

Alternate gene names: 157370363

Gene position: 2320238-2318847 (Counterclockwise)

Preceding gene: 157370364

Following gene: 157370361

Centisome position: 42.58

GC content: 58.12

Gene sequence:

>1392_bases
ATGAATCTTCCGCTGGTTATTAACGTGGTGATTTTTGTCGCCCTCCTTTTGCTGTTGGCGCAAAGCCGTCATAAGCAATG
GAGCCTGGCGAAAAAAGTACTGGTCGGCCTGGTCATGGGCGTGGTGTTCGGTCTGGCGCTGCAACTGGTGTACGGCTCGG
ACAACCCGGTACTGAAAGAATCCATCAGCTGGTTCAACATTGTCGGTAACGGCTATGTGCAACTGCTGCAAATGATTGTG
ATGCCGCTGGTGTTCGCCTCAATTCTGAGCGCGGTCGCCAAGCTGCACAACGCCTCTTCTCTGGGGAAAATCAGCTTCCT
GACTATCGGCACCCTGTTGTTCACCACGCTGATTTCGGCGCTGGTGGGCGTGCTGGTGACCAACCTGTTTGGTCTGACCG
CCGAGGGTCTGGTGCAAGGGGCGCAAGAAAGCGCGCGTCTGTCAGCGATCCAAAGCAACTACGTCGGTAAACTGGCCGAC
CTGACCGTACCGCAGATGGTGCTGTCGTTTATTCCTAAAAACCCGTTTGCCGATCTGACCGGGGCCAGCCCAACCTCAAT
CATCAGCGTGGTGATCTTCGCGACCTTCCTCGGCGTGGCGTCGCTGCAGTTGCTGAAAGACGACAAGCCTAAAGGCGAAC
GCGTGCTGGTGGCGATCGATACCCTGCAGGCCTGGGTAATGAAGCTGGTGCGTCTGGTGATGAAACTAACTCCGTACGGC
GTACTGGCACTGATGACCAAAGTGGTCGCCGGCTCTAACGTCCACGACATCATCAAACTGGGTAGCTTCGTCGTCGCCTC
CTATCTGGGTCTGGCGATCATGTTTGCCGTGCACGCCGCCCTGCTGGCCTTCACCGGCGTTAACCCGTTGAAGTTCTTCC
GCAAAGTATGGCCGGTGATCACCTTCGCCTTTACCAGCCGCTCCAGCGCCGCCAGCATTCCACTGAACGTGGAAGCGCAG
ACCCGTCGTTTGGGCGTACCGGAATCCATTGCCAGCTTCTCGGCCTCGTTTGGTGCCACTATCGGCCAGAACGGCTGTGC
CGGTCTCTACCCGGCCATGCTGGCGGTAATGGTAGCCCCAACCGTCGGTATTAATCCGCTGGACCCGGTGTGGATCGCCA
CCCTGGTCGGTATCGTCACCATCAGCTCCGCCGGCGTTGCCGGTGTCGGTGGCGGTGCGACTTTCGCCGCGCTGATCGTG
CTACCGGCGATGGGCCTGCCAGTTACGCTGGTTGCGCTGCTGATCTCGGTTGAACCGCTGATCGACATGGGCCGTACCGC
ACTGAACGTCAACGGCTCTATGGCTGCCGGTACCATCACCAGTCAGTTGATGAAGCAAACCGACAAGTCCATTATGGACA
GCGAAGACGAAGTGGAACTGGCTCACCAGTAA

Upstream 100 bases:

>100_bases
TATAAGTGAGCCGTTACGCAAACTGTTACGATATTTAGTATCGCTACGCCTTGGTGCATAGCCATTTTTATATAAGAAAA
AATAATTGGAGACATTGGGG

Downstream 100 bases:

>100_bases
ATTTCGTCGGCATTAAAAAACCGGGGCTGAAGCAGGCCCCGGTTTTTTTACGTCTGAAAAACCGCTAAATCTAAAATAAA
AAAAGCGCTGCCCATAACTG

Product: sodium:dicarboxylate symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MNLPLVINVVIFVALLLLLAQSRHKQWSLAKKVLVGLVMGVVFGLALQLVYGSDNPVLKESISWFNIVGNGYVQLLQMIV
MPLVFASILSAVAKLHNASSLGKISFLTIGTLLFTTLISALVGVLVTNLFGLTAEGLVQGAQESARLSAIQSNYVGKLAD
LTVPQMVLSFIPKNPFADLTGASPTSIISVVIFATFLGVASLQLLKDDKPKGERVLVAIDTLQAWVMKLVRLVMKLTPYG
VLALMTKVVAGSNVHDIIKLGSFVVASYLGLAIMFAVHAALLAFTGVNPLKFFRKVWPVITFAFTSRSSAASIPLNVEAQ
TRRLGVPESIASFSASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPVWIATLVGIVTISSAGVAGVGGGATFAALIV
LPAMGLPVTLVALLISVEPLIDMGRTALNVNGSMAAGTITSQLMKQTDKSIMDSEDEVELAHQ

Sequences:

>Translated_463_residues
MNLPLVINVVIFVALLLLLAQSRHKQWSLAKKVLVGLVMGVVFGLALQLVYGSDNPVLKESISWFNIVGNGYVQLLQMIV
MPLVFASILSAVAKLHNASSLGKISFLTIGTLLFTTLISALVGVLVTNLFGLTAEGLVQGAQESARLSAIQSNYVGKLAD
LTVPQMVLSFIPKNPFADLTGASPTSIISVVIFATFLGVASLQLLKDDKPKGERVLVAIDTLQAWVMKLVRLVMKLTPYG
VLALMTKVVAGSNVHDIIKLGSFVVASYLGLAIMFAVHAALLAFTGVNPLKFFRKVWPVITFAFTSRSSAASIPLNVEAQ
TRRLGVPESIASFSASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPVWIATLVGIVTISSAGVAGVGGGATFAALIV
LPAMGLPVTLVALLISVEPLIDMGRTALNVNGSMAAGTITSQLMKQTDKSIMDSEDEVELAHQ
>Mature_463_residues
MNLPLVINVVIFVALLLLLAQSRHKQWSLAKKVLVGLVMGVVFGLALQLVYGSDNPVLKESISWFNIVGNGYVQLLQMIV
MPLVFASILSAVAKLHNASSLGKISFLTIGTLLFTTLISALVGVLVTNLFGLTAEGLVQGAQESARLSAIQSNYVGKLAD
LTVPQMVLSFIPKNPFADLTGASPTSIISVVIFATFLGVASLQLLKDDKPKGERVLVAIDTLQAWVMKLVRLVMKLTPYG
VLALMTKVVAGSNVHDIIKLGSFVVASYLGLAIMFAVHAALLAFTGVNPLKFFRKVWPVITFAFTSRSSAASIPLNVEAQ
TRRLGVPESIASFSASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPVWIATLVGIVTISSAGVAGVGGGATFAALIV
LPAMGLPVTLVALLISVEPLIDMGRTALNVNGSMAAGTITSQLMKQTDKSIMDSEDEVELAHQ

Specific function: Unknown

COG id: COG1823

COG function: function code R; Predicted Na+/dicarboxylate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]

Homologues:

Organism=Homo sapiens, GI223468564, Length=274, Percent_Identity=29.5620437956204, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI223468566, Length=274, Percent_Identity=29.5620437956204, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI5032093, Length=274, Percent_Identity=29.5620437956204, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI194239697, Length=442, Percent_Identity=25.1131221719457, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI40254478, Length=512, Percent_Identity=24.4140625, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI21314632, Length=284, Percent_Identity=30.6338028169014, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI66773030, Length=258, Percent_Identity=31.7829457364341, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI169790839, Length=479, Percent_Identity=24.2171189979123, Blast_Score=83, Evalue=7e-16,
Organism=Homo sapiens, GI4827012, Length=255, Percent_Identity=28.2352941176471, Blast_Score=76, Evalue=7e-14,
Organism=Escherichia coli, GI1788024, Length=463, Percent_Identity=86.8250539956803, Blast_Score=764, Evalue=0.0,
Organism=Escherichia coli, GI1790514, Length=450, Percent_Identity=24.4444444444444, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1789947, Length=415, Percent_Identity=23.1325301204819, Blast_Score=107, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI71983106, Length=437, Percent_Identity=25.858123569794, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI71983099, Length=437, Percent_Identity=25.858123569794, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI193206505, Length=473, Percent_Identity=24.3128964059197, Blast_Score=109, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI71996953, Length=468, Percent_Identity=25.2136752136752, Blast_Score=101, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI193206654, Length=466, Percent_Identity=25.7510729613734, Blast_Score=101, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17537407, Length=472, Percent_Identity=25.2118644067797, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17541374, Length=455, Percent_Identity=25.7142857142857, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24583025, Length=465, Percent_Identity=23.4408602150538, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI17137668, Length=465, Percent_Identity=23.4408602150538, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24583023, Length=465, Percent_Identity=23.4408602150538, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001991 [H]

Pfam domain/function: PF00375 SDF [H]

EC number: NA

Molecular weight: Translated: 48667; Mature: 48667

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCC
>Mature Secondary Structure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HHCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]