| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is prc [H]
Identifier: 157370359
GI number: 157370359
Start: 2313038
End: 2315074
Strand: Direct
Name: prc [H]
Synonym: Spro_2119
Alternate gene names: 157370359
Gene position: 2313038-2315074 (Clockwise)
Preceding gene: 157370358
Following gene: 157370360
Centisome position: 42.45
GC content: 56.5
Gene sequence:
>2037_bases ATGAACAAATTTGTCAGATTAACAGCAGTCGCGGGTCTGTTGTGGGCGGGTGTCAGTTACGGAGCGGAACCAGCCAACAT CCGCATCGATCAACTGCCTCAGCTGCAGCAGGAACCGCAACATGCAACTGTGAGTGAGCGCGTAACTTCGCGCTTCACTC GCTCTCATTACCGTCAGTTTTCCCTCGACGCGGACTTTTCAGGCAAGATCTTCGATCGTTATCTGAATATGCTGGACTAC AGCCATAACGTGCTGCTGGCCTCCGACGTGGCGCAATTCGCCAACAAGCGCAATCAGCTGGGCGAAGAACTGAAAAGCGG TAAGCTCGATACGCCATACGCGCTGTACAATCTGGCGCAGAAACGCCGTTTTGAGCGTTACACCTATGCATTGTCGCTGC TGGAAAAGCCAATGAGCTTCACCGGCAACGACACTATTGATCTCGACCGCAGCAAAGCGCCGTGGCCGAAAGACAAGGCC GAACTGGACGCGCTGTGGAATGCGAAAGTCAAATATGACGAGCTGAACCTCAAGCTGACCGGCAAGACCGACAAGGAAAT TCGTGAAACGCTGACCAAGCGCTATCAGTTTGCCATCAAGCGCCTGACGCAAAGCAACAGCGAAGACGTTTTCCAACTGG CGATGAATGCCTTTGCGCATGAAATCGACCCGCATACCAACTATCTCTCCCCACGCAATACCGAACAGTTCAATACCGAG ATGAGCCTGTCGCTGGAAGGTATCGGTGCGGTGTTGCAGATGGATGACGATTACACCCTGATCAACTCCATGGTGCCAGG TGGCCCGGCGGCGAAGAGCAAGGCGATCACCGTGGGTGACCGTATTGTCGGCGTTGGCCAGGCGGGCAAGCCTGTGGTCG ATGTGATCGGCTGGCGTCTGGACGACGTGGTTTCCCTGATTAAAGGGCCGAAGGGCAGCAAGGTGCGCCTGGAGATCCTG CCGGCCGGCAAGGGCACTAAAACCCGAGTGGTCACCTTGACCCGTGAGCGTATCCGTCTGGAAGACCGCGCGGTGAAAAT GACCATCAAGACCGTCGGCAAAGAGAAAGTCGCGGTGATGGACATTCCGGGCTTCTACGTGGGCCTGACCGATGACGTGA AAGTTCAGTTGCAGAAGATGGCCAAGCAGAACGTCAAGAGCCTGATCATCGACCTGCGCACTAACGGCGGCGGCGCACTG ACCGAAGCGGTTTCGCTGTCCGGTCTGTTCATTCCGAGCGGCCCGGTAGTGCAGGTACGTGACAACAACGGTAAAGTGCG TGAAGACGCGGACACCGACGGCGTGACCTATTACAAGGGGCCGCTGGTGGTACTGGTTGACCGTTTCAGCGCCTCGGCTT CGGAGATCTTCGCCGCGGCAATGCAGGACTATGGTCGCGCGCTGATCGTCGGTGAACCGACCTTCGGGAAAGGCACCGTG CAGCAGTATCGCTCGCTGAACCGCATTTACGATCAGATGCTGCGTCCGGAGTGGCCGGCGTTGGGGTCGGTGCAATACAC CATACAGAAGTTCTACCGCGTTAACGGCGGCAGTACCCAACGTAAGGGGGTTACCCCGGATATCCTGATGCCGAGCGGCA TTGATCCGGCGGAAACCGGTGAAGCGTTTGAAGATAACGCTATGCCGTGGGACAGCATCAATGCGGCGACCTACACCAAA ACCGGTGACATGAAGCCGTTTGAGCCTGAACTGCTGAAGGATCATGAGCAGCGTATCGCCAAGGATCCCGAGTTCCAGTA CATCGCGCAGGATATCGCTCATTACAAGGCGCTGAAGGACAAGCGTAACATCGTCTCTCTCAACCTGGTTCAGCGCGAGA AAGAGAACCACGATGATGACGCTACCCGTCTGCAACGTGTTAATGATCGCCTGCAGCGCGCCGGTAAAAAGCCGCTGAAG GCCCTGGAAGATTTGCCGAAGGATTACCAGGAACCTGACCCATATCTGGATGAAACCGTGCACATCGCACTGGATCTGGC GCACCTTGATCAGGCGCAGCCGGCGGCGGCGAAATAA
Upstream 100 bases:
>100_bases GAAATCGCCAAAGATGGCGTACGTGTGCAGCTCTCTTCCGGTCTGGCGATGATTGTGCGCGCAGAACACTTGCAGTTCTG ATACGGAGGCCAACCAAGGC
Downstream 100 bases:
>100_bases CGCAGCCGAGTCTCAGTAGAGTCTCAGTAAATGAAAAGCGCACCTTCGGGTGCGTTTTTTAATGGGCGCTTCTGGCGGTA TTGAATAACCCACACCGTTA
Product: carboxy-terminal protease
Products: NA
Alternate protein names: C-terminal-processing peptidase; PRC protein; Protease Re [H]
Number of amino acids: Translated: 678; Mature: 678
Protein sequence:
>678_residues MNKFVRLTAVAGLLWAGVSYGAEPANIRIDQLPQLQQEPQHATVSERVTSRFTRSHYRQFSLDADFSGKIFDRYLNMLDY SHNVLLASDVAQFANKRNQLGEELKSGKLDTPYALYNLAQKRRFERYTYALSLLEKPMSFTGNDTIDLDRSKAPWPKDKA ELDALWNAKVKYDELNLKLTGKTDKEIRETLTKRYQFAIKRLTQSNSEDVFQLAMNAFAHEIDPHTNYLSPRNTEQFNTE MSLSLEGIGAVLQMDDDYTLINSMVPGGPAAKSKAITVGDRIVGVGQAGKPVVDVIGWRLDDVVSLIKGPKGSKVRLEIL PAGKGTKTRVVTLTRERIRLEDRAVKMTIKTVGKEKVAVMDIPGFYVGLTDDVKVQLQKMAKQNVKSLIIDLRTNGGGAL TEAVSLSGLFIPSGPVVQVRDNNGKVREDADTDGVTYYKGPLVVLVDRFSASASEIFAAAMQDYGRALIVGEPTFGKGTV QQYRSLNRIYDQMLRPEWPALGSVQYTIQKFYRVNGGSTQRKGVTPDILMPSGIDPAETGEAFEDNAMPWDSINAATYTK TGDMKPFEPELLKDHEQRIAKDPEFQYIAQDIAHYKALKDKRNIVSLNLVQREKENHDDDATRLQRVNDRLQRAGKKPLK ALEDLPKDYQEPDPYLDETVHIALDLAHLDQAQPAAAK
Sequences:
>Translated_678_residues MNKFVRLTAVAGLLWAGVSYGAEPANIRIDQLPQLQQEPQHATVSERVTSRFTRSHYRQFSLDADFSGKIFDRYLNMLDY SHNVLLASDVAQFANKRNQLGEELKSGKLDTPYALYNLAQKRRFERYTYALSLLEKPMSFTGNDTIDLDRSKAPWPKDKA ELDALWNAKVKYDELNLKLTGKTDKEIRETLTKRYQFAIKRLTQSNSEDVFQLAMNAFAHEIDPHTNYLSPRNTEQFNTE MSLSLEGIGAVLQMDDDYTLINSMVPGGPAAKSKAITVGDRIVGVGQAGKPVVDVIGWRLDDVVSLIKGPKGSKVRLEIL PAGKGTKTRVVTLTRERIRLEDRAVKMTIKTVGKEKVAVMDIPGFYVGLTDDVKVQLQKMAKQNVKSLIIDLRTNGGGAL TEAVSLSGLFIPSGPVVQVRDNNGKVREDADTDGVTYYKGPLVVLVDRFSASASEIFAAAMQDYGRALIVGEPTFGKGTV QQYRSLNRIYDQMLRPEWPALGSVQYTIQKFYRVNGGSTQRKGVTPDILMPSGIDPAETGEAFEDNAMPWDSINAATYTK TGDMKPFEPELLKDHEQRIAKDPEFQYIAQDIAHYKALKDKRNIVSLNLVQREKENHDDDATRLQRVNDRLQRAGKKPLK ALEDLPKDYQEPDPYLDETVHIALDLAHLDQAQPAAAK >Mature_678_residues MNKFVRLTAVAGLLWAGVSYGAEPANIRIDQLPQLQQEPQHATVSERVTSRFTRSHYRQFSLDADFSGKIFDRYLNMLDY SHNVLLASDVAQFANKRNQLGEELKSGKLDTPYALYNLAQKRRFERYTYALSLLEKPMSFTGNDTIDLDRSKAPWPKDKA ELDALWNAKVKYDELNLKLTGKTDKEIRETLTKRYQFAIKRLTQSNSEDVFQLAMNAFAHEIDPHTNYLSPRNTEQFNTE MSLSLEGIGAVLQMDDDYTLINSMVPGGPAAKSKAITVGDRIVGVGQAGKPVVDVIGWRLDDVVSLIKGPKGSKVRLEIL PAGKGTKTRVVTLTRERIRLEDRAVKMTIKTVGKEKVAVMDIPGFYVGLTDDVKVQLQKMAKQNVKSLIIDLRTNGGGAL TEAVSLSGLFIPSGPVVQVRDNNGKVREDADTDGVTYYKGPLVVLVDRFSASASEIFAAAMQDYGRALIVGEPTFGKGTV QQYRSLNRIYDQMLRPEWPALGSVQYTIQKFYRVNGGSTQRKGVTPDILMPSGIDPAETGEAFEDNAMPWDSINAATYTK TGDMKPFEPELLKDHEQRIAKDPEFQYIAQDIAHYKALKDKRNIVSLNLVQREKENHDDDATRLQRVNDRLQRAGKKPLK ALEDLPKDYQEPDPYLDETVHIALDLAHLDQAQPAAAK
Specific function: Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3 (PBP3). May be involved in protection of the bacterium from thermal and osmotic stresses [H]
COG id: COG0793
COG function: function code M; Periplasmic protease
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Periplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PDZ (DHR) domain [H]
Homologues:
Organism=Escherichia coli, GI1788134, Length=676, Percent_Identity=81.8047337278107, Blast_Score=1149, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001478 - InterPro: IPR005151 - InterPro: IPR004447 - InterPro: IPR020992 [H]
Pfam domain/function: PF11818 DUF3340; PF00595 PDZ; PF03572 Peptidase_S41 [H]
EC number: =3.4.21.102 [H]
Molecular weight: Translated: 75948; Mature: 75948
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: PS50106 PDZ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKFVRLTAVAGLLWAGVSYGAEPANIRIDQLPQLQQEPQHATVSERVTSRFTRSHYRQF CCCEEHHHHHHHHHHHHHHCCCCCCCEEHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHEE SLDADFSGKIFDRYLNMLDYSHNVLLASDVAQFANKRNQLGEELKSGKLDTPYALYNLAQ CCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH KRRFERYTYALSLLEKPMSFTGNDTIDLDRSKAPWPKDKAELDALWNAKVKYDELNLKLT HHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCHHHHHHHHCCEEEEEEEEEEEC GKTDKEIRETLTKRYQFAIKRLTQSNSEDVFQLAMNAFAHEIDPHTNYLSPRNTEQFNTE CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCE MSLSLEGIGAVLQMDDDYTLINSMVPGGPAAKSKAITVGDRIVGVGQAGKPVVDVIGWRL EEEEECCCCEEEEECCCHHHHHHCCCCCCCCCCCEEEECCEEEECCCCCCHHHHHHCCCH DDVVSLIKGPKGSKVRLEILPAGKGTKTRVVTLTRERIRLEDRAVKMTIKTVGKEKVAVM HHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEEEHHHHHHHHHHHEEEHHHCCCCCEEEE DIPGFYVGLTDDVKVQLQKMAKQNVKSLIIDLRTNGGGALTEAVSLSGLFIPSGPVVQVR ECCCEEEECCHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHCEEEECCCCEEEEE DNNGKVREDADTDGVTYYKGPLVVLVDRFSASASEIFAAAMQDYGRALIVGEPTFGKGTV CCCCCCCCCCCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCEEEEECCCCCCHHH QQYRSLNRIYDQMLRPEWPALGSVQYTIQKFYRVNGGSTQRKGVTPDILMPSGIDPAETG HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCC EAFEDNAMPWDSINAATYTKTGDMKPFEPELLKDHEQRIAKDPEFQYIAQDIAHYKALKD CCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH KRNIVSLNLVQREKENHDDDATRLQRVNDRLQRAGKKPLKALEDLPKDYQEPDPYLDETV CCCEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEE HIALDLAHLDQAQPAAAK EEEEEHHHHCCCCCCCCC >Mature Secondary Structure MNKFVRLTAVAGLLWAGVSYGAEPANIRIDQLPQLQQEPQHATVSERVTSRFTRSHYRQF CCCEEHHHHHHHHHHHHHHCCCCCCCEEHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHEE SLDADFSGKIFDRYLNMLDYSHNVLLASDVAQFANKRNQLGEELKSGKLDTPYALYNLAQ CCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH KRRFERYTYALSLLEKPMSFTGNDTIDLDRSKAPWPKDKAELDALWNAKVKYDELNLKLT HHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCHHHHHHHHCCEEEEEEEEEEEC GKTDKEIRETLTKRYQFAIKRLTQSNSEDVFQLAMNAFAHEIDPHTNYLSPRNTEQFNTE CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCE MSLSLEGIGAVLQMDDDYTLINSMVPGGPAAKSKAITVGDRIVGVGQAGKPVVDVIGWRL EEEEECCCCEEEEECCCHHHHHHCCCCCCCCCCCEEEECCEEEECCCCCCHHHHHHCCCH DDVVSLIKGPKGSKVRLEILPAGKGTKTRVVTLTRERIRLEDRAVKMTIKTVGKEKVAVM HHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEEEHHHHHHHHHHHEEEHHHCCCCCEEEE DIPGFYVGLTDDVKVQLQKMAKQNVKSLIIDLRTNGGGALTEAVSLSGLFIPSGPVVQVR ECCCEEEECCHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHCEEEECCCCEEEEE DNNGKVREDADTDGVTYYKGPLVVLVDRFSASASEIFAAAMQDYGRALIVGEPTFGKGTV CCCCCCCCCCCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCEEEEECCCCCCHHH QQYRSLNRIYDQMLRPEWPALGSVQYTIQKFYRVNGGSTQRKGVTPDILMPSGIDPAETG HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCC EAFEDNAMPWDSINAATYTKTGDMKPFEPELLKDHEQRIAKDPEFQYIAQDIAHYKALKD CCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH KRNIVSLNLVQREKENHDDDATRLQRVNDRLQRAGKKPLKALEDLPKDYQEPDPYLDETV CCCEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEE HIALDLAHLDQAQPAAAK EEEEEHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1856173; 1729701; 9097040; 9278503; 1447154; 10049386; 7499412; 8576225 [H]