| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157370351
Identifier: 157370351
GI number: 157370351
Start: 2303417
End: 2304181
Strand: Reverse
Name: 157370351
Synonym: Spro_2109
Alternate gene names: NA
Gene position: 2304181-2303417 (Counterclockwise)
Preceding gene: 157370352
Following gene: 157370350
Centisome position: 42.29
GC content: 57.91
Gene sequence:
>765_bases ATGCGTATACCCTTCCGACTGCCATTGACGGCAGCGCTGCTGATTGTCGGCCAACAACAGGCGCTTGCCGCCGCCTCGAT CCTGATTTGGCCCATTGACCCGGTAATTGAAGATCAACAGCCTGCTACGGCACTGTGGCTGGAAAACCGCGATACCAAAC CCGTCTATATGCAAGTTCGCGTACTCGGCTGGAAACAAACCGCCGGCAAAGACGATTACAGCAACCAGAGCGAAGTGATC GCCAGCCCGCCGGTAGCCTCTATTGCCCCAGGCAAACGCCAACTGATCCGGCTGGTTAAGCAAACCCCGCCGCCTGCCGG CCAGGAGCGTGCCTACCGTATTCTGATTGATGAAGTCCCGGTGAAAGATTCAGGCAACCCATCCGCACCAGATGGCGCAC AAATGGGATTGAAATTCCAGATGCGCTATTCGGTACCGCTGTTTGTCAGCGGCAAGGGCGTCTGGACCAAGCAGGATTCA GAGAAGCCGCGCGATTATGCCACCGCCAGTCAACCGCAACTCAGCTACCGGCTGTTGCAGCAAAGCAGCCAGCGCTGGCT GGAGGTACGCAACCAGGGCACGGTGCATGCGCGCATCTCCAAAGTGACGATGCAGGGGAAGACGCTCAATGCCGGCCTGA TGGGTTACGTATTACCCGGCTCGCAGATGCGCTTTGCCGTACCGGCCTCTGGCAGCTTCAGCAGCGGTCAACTGCAAGCC ACGGTCAACGACAATAAACAGCCAATAACCCTGCCTGCTTACTGA
Upstream 100 bases:
>100_bases CCCGTTTGTTCTCGACCAGTACCCTGCCCACCAGTGGCACTTACAGCGATACGGTCTTACTGACGGTCACTTATTAGTAT TTTGAAATAAGGATTTAGCC
Downstream 100 bases:
>100_bases GTGTCAGGTGCCGTTAACCAGGATAGCGTCACCCAGGCGTAACGGGTTCGGGCTCAAACCGTTAGCCTTCGCCGTACTCT GCGCAGTGGCCACACCGTGG
Product: putative chaperone protein
Products: NA
Alternate protein names: Type 1 Pili Usher Pathway Chaperone CsuC; Fimbrial Chaperone; P Pilus Assembly Protein Chaperone PapD-Like Protein; CsuC Protein; Chaperone Protein; P Pilus Assembly Protein Chaperone PapD-Like; Pili Assembly Chaperone Transmembrane Protein; Fimbrial Chaperone Protein; Exported Fimbriae-Related Chaperone; Pilus Assembly Protein; Type 1 Pilus Chaperone FimC; Fimbriae Chaperone; Chaperone Protein EcpD; CsuC Protein Fimbrial Chaperone Proteins; Chaperone Protein MrkB; Putataive Fimbrial Chaperone Protein; Type I Pili; Type 1 Pili Usher Pathway Chaperone; Fimbrial Assembly Chaperone; Pili Assembly Chaperone Transmembrane Protein Papd-Like; Type I Pilus Usher Pathway Chaperone CsuC; PilP Assembly Chaperone Transmembrane Protein; P Pilus Assembly Protein Chaperone PapD; Fimbriae-Assembly Chaperone; Pilus Assembly Protein Chaperone PapD
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MRIPFRLPLTAALLIVGQQQALAAASILIWPIDPVIEDQQPATALWLENRDTKPVYMQVRVLGWKQTAGKDDYSNQSEVI ASPPVASIAPGKRQLIRLVKQTPPPAGQERAYRILIDEVPVKDSGNPSAPDGAQMGLKFQMRYSVPLFVSGKGVWTKQDS EKPRDYATASQPQLSYRLLQQSSQRWLEVRNQGTVHARISKVTMQGKTLNAGLMGYVLPGSQMRFAVPASGSFSSGQLQA TVNDNKQPITLPAY
Sequences:
>Translated_254_residues MRIPFRLPLTAALLIVGQQQALAAASILIWPIDPVIEDQQPATALWLENRDTKPVYMQVRVLGWKQTAGKDDYSNQSEVI ASPPVASIAPGKRQLIRLVKQTPPPAGQERAYRILIDEVPVKDSGNPSAPDGAQMGLKFQMRYSVPLFVSGKGVWTKQDS EKPRDYATASQPQLSYRLLQQSSQRWLEVRNQGTVHARISKVTMQGKTLNAGLMGYVLPGSQMRFAVPASGSFSSGQLQA TVNDNKQPITLPAY >Mature_254_residues MRIPFRLPLTAALLIVGQQQALAAASILIWPIDPVIEDQQPATALWLENRDTKPVYMQVRVLGWKQTAGKDDYSNQSEVI ASPPVASIAPGKRQLIRLVKQTPPPAGQERAYRILIDEVPVKDSGNPSAPDGAQMGLKFQMRYSVPLFVSGKGVWTKQDS EKPRDYATASQPQLSYRLLQQSSQRWLEVRNQGTVHARISKVTMQGKTLNAGLMGYVLPGSQMRFAVPASGSFSSGQLQA TVNDNKQPITLPAY
Specific function: Unknown
COG id: COG3121
COG function: function code NU; P pilus assembly protein, chaperone PapD
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27951; Mature: 27951
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIPFRLPLTAALLIVGQQQALAAASILIWPIDPVIEDQQPATALWLENRDTKPVYMQVR CCCCCCCCHHEEEEEECCHHHHEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEE VLGWKQTAGKDDYSNQSEVIASPPVASIAPGKRQLIRLVKQTPPPAGQERAYRILIDEVP EEEEECCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECC VKDSGNPSAPDGAQMGLKFQMRYSVPLFVSGKGVWTKQDSEKPRDYATASQPQLSYRLLQ CCCCCCCCCCCCCCCCEEEEEEECCEEEECCCEEEECCCCCCCCCCCCCCCCHHHHHHHH QSSQRWLEVRNQGTVHARISKVTMQGKTLNAGLMGYVLPGSQMRFAVPASGSFSSGQLQA HHHHHHHHHCCCCEEEEEEEEEEECCCEECCCEEEEEECCCCEEEEECCCCCCCCCEEEE TVNDNKQPITLPAY EECCCCCEEEECCC >Mature Secondary Structure MRIPFRLPLTAALLIVGQQQALAAASILIWPIDPVIEDQQPATALWLENRDTKPVYMQVR CCCCCCCCHHEEEEEECCHHHHEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEE VLGWKQTAGKDDYSNQSEVIASPPVASIAPGKRQLIRLVKQTPPPAGQERAYRILIDEVP EEEEECCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECC VKDSGNPSAPDGAQMGLKFQMRYSVPLFVSGKGVWTKQDSEKPRDYATASQPQLSYRLLQ CCCCCCCCCCCCCCCCEEEEEEECCEEEECCCEEEECCCCCCCCCCCCCCCCHHHHHHHH QSSQRWLEVRNQGTVHARISKVTMQGKTLNAGLMGYVLPGSQMRFAVPASGSFSSGQLQA HHHHHHHHHCCCCEEEEEEEEEEECCCEECCCEEEEEECCCCEEEEECCCCCCCCCEEEE TVNDNKQPITLPAY EECCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA