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The map label for this gene is sirB2 [H]

Identifier: 157370234

GI number: 157370234

Start: 2180319

End: 2180717

Strand: Direct

Name: sirB2 [H]

Synonym: Spro_1992

Alternate gene names: 157370234

Gene position: 2180319-2180717 (Clockwise)

Preceding gene: 157370233

Following gene: 157370235

Centisome position: 40.01

GC content: 46.87

Gene sequence:

>399_bases
ATGGCAGTCTACTCAGCGTTAAAACATCTGCACCTGTTGACAGTCACCATCAGTATTATCTTGTTTGTGTTGCGATTTTT
CTGGAAATGGCGAGACTCGGCAATGATGAACAAACGCTGGGTGAAGATAACGCCGCACATAAATGATACGGTGTTGTTCG
TCAGTGGTATCGCGTTGGTGGTGATGTTCAAGCTTTATCCGCTGCTGGGTATGGACTCGTGGCTGACCGAGAAGCTGTTT
GGCGTTATTATCTATATCCTGCTTGGCTACGTCGCATTGGGCAAGAAGACCAAAAGTAAGAACCTGCGCACCCTGGCGTT
TTTGCTGGCGTTGGGCTGTCTGTACCTGATAATTAAACTTGCCACGACGAAAATACCCTTTCTGATGGGATACTTATGA

Upstream 100 bases:

>100_bases
CTACGGTGATAACGATCGCGTGACTTTTGGCCAATGGCCGTAGCAGTAACTGAGAACTAACAAAAACAAAGCACACGGCG
AATAAACAAAAGGAAGCAAT

Downstream 100 bases:

>100_bases
GTAGCATTGCTGATTTTGAATTTAACACCGCGCTGCTGAGCGCGGGCGTGATCCTGGTTTCGCAGTCCGTGCGGCGTGAT
TTCCCTACCGCCGAAGTCGA

Product: invasion gene expression up-regulator SirB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MAVYSALKHLHLLTVTISIILFVLRFFWKWRDSAMMNKRWVKITPHINDTVLFVSGIALVVMFKLYPLLGMDSWLTEKLF
GVIIYILLGYVALGKKTKSKNLRTLAFLLALGCLYLIIKLATTKIPFLMGYL

Sequences:

>Translated_132_residues
MAVYSALKHLHLLTVTISIILFVLRFFWKWRDSAMMNKRWVKITPHINDTVLFVSGIALVVMFKLYPLLGMDSWLTEKLF
GVIIYILLGYVALGKKTKSKNLRTLAFLLALGCLYLIIKLATTKIPFLMGYL
>Mature_131_residues
AVYSALKHLHLLTVTISIILFVLRFFWKWRDSAMMNKRWVKITPHINDTVLFVSGIALVVMFKLYPLLGMDSWLTEKLFG
VIIYILLGYVALGKKTKSKNLRTLAFLLALGCLYLIIKLATTKIPFLMGYL

Specific function: Unknown

COG id: COG3094

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787464, Length=129, Percent_Identity=46.5116279069767, Blast_Score=115, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007360 [H]

Pfam domain/function: PF04247 SirB [H]

EC number: NA

Molecular weight: Translated: 15184; Mature: 15053

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVYSALKHLHLLTVTISIILFVLRFFWKWRDSAMMNKRWVKITPHINDTVLFVSGIALV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHH
VMFKLYPLLGMDSWLTEKLFGVIIYILLGYVALGKKTKSKNLRTLAFLLALGCLYLIIKL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
ATTKIPFLMGYL
HHHHHHHHHCCC
>Mature Secondary Structure 
AVYSALKHLHLLTVTISIILFVLRFFWKWRDSAMMNKRWVKITPHINDTVLFVSGIALV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHH
VMFKLYPLLGMDSWLTEKLFGVIIYILLGYVALGKKTKSKNLRTLAFLLALGCLYLIIKL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
ATTKIPFLMGYL
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7543480; 8905232; 9278503 [H]