Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

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The map label for this gene is yhjA [H]

Identifier: 157370210

GI number: 157370210

Start: 2151457

End: 2152848

Strand: Direct

Name: yhjA [H]

Synonym: Spro_1968

Alternate gene names: 157370210

Gene position: 2151457-2152848 (Clockwise)

Preceding gene: 157370209

Following gene: 157370211

Centisome position: 39.48

GC content: 53.52

Gene sequence:

>1392_bases
ATGAAAAAAGTCACCCGTATTGCGGCGATTTCCATTGCAGCTGTTGCGTTGGTTTATTTCGGTTTGGCCGGCTATGTCTG
GCATCTCGATACCCAGCGAATGGAGAATAGCTCGGTACTGCGTTCCGCAGTGCAACAGAATAACCAGGTGCTGGGGTTGC
TGAGGGAAAAGGGCTGCGACTACTGCCATACCCCGTCCGCTTCGCTTCCGTTCTATGCCTCTTTCCCCATCGCCAAACAG
TTGATGGAATACGATATTCGCCTGGGTTACTCCTCCTTCAACCTGGAGCCTGTGCGCAGCGCCTTGATTAAAGATAGGCC
GCAGGCACAAAGCGACCTGAATAAAATTGAGTGGGTAATGCAGCACAAAACCATGCCACCCGCCCGCTATGTGGCTTTGC
ACTGGGCTGGGCAGATCAATCCCGATGAACGGGAAATTATTCTCGCCTGGATAGCGCAGCAACGCGCGCGCTATTACGCC
AGTGCAGATACTGCACAGCCCCATCGTAATGAGCCGGTTCAACCGATCCCCAAAACATTGCCGGTTGATGGGCAGAAGGT
GGCATTGGGGTTTCGGCTTTTTCACGATCCCCGCCTGTCTGGGGATAACACTCTTTCCTGTGCTCACTGTCACTCGTTGA
ATACCGGCGGGGTCGACGGAAGAAAAACCTCAGTCGGGGTAGGCGGTGCGGTGGGGCCGATTAACGCGCCAACGGTGTTT
AACTCGGTGTTCAATAGCGAACAATTCTGGGATGGCCGTGCGCCGTCGCTACAGGCACAGGCCGGTGGGCCGCCATTAAA
CCCGATAGAAATGGCCTCTAAATCCTGGGATGAAATTATCAATAAGCTCGATAAGGATCCGCTGCTGACCCGCGATTTTG
CTGCGGTCTATCCACAAGGGCTCAGCGGCGAAAATATTACCGATGCCATCGCCGAATTTGAAAAAACCTTAATCACCCCG
AATGCCCCCTTCGATAACTGGCTGCGCGGCGATGAGAATGCCATGACGATGCAGCAAAAACGCGGCTATCAATTATTTAA
AGACAACAAATGCGCCACCTGCCATGCAGGGATCATATTAGGCGGCCGCTCTTTTGAGCCTTTGGGGCTGAAGCGTGATT
TTAATTTTGGCGAGATCACCACGGTAGATATTGGGCGTATGAACGTCACCAGTGCTGTGCGTGACCGGTTACGTCAGAAG
GTGCCTGGCTTGCGCAATGTCGCTCAGACCGCGCCTTATTTTCATCGTGGCGACGTCGCTACGCTGGATCAGGCGGTAAA
ACTGATGTTGCGTTATCAGGTGGGTAGCGAACTGCCTCAGCAGGACGTCGATGATATTGTCGCCTTCCTCGAAAGTCTGA
GCGGGGTCTATACCCCTTACCGGCCAGAATAA

Upstream 100 bases:

>100_bases
TGTGGGAATTATTGATTATCGTCAAGATTATTATTTACCCTCTGTTTAGTCTTGTTTGACGACGATTATTTGGTCGGCAA
TGTTTCATAAGGAAAGTGAA

Downstream 100 bases:

>100_bases
GGAATAACGCTTTCATTCAATGTCTTCTTATCAGGCCCCGGCAACGGGGCTATTTCAGCCTGATATCCCCGCCCGAACGT
CGCGTTTCTGAACTAAAATT

Product: cytochrome-c peroxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MKKVTRIAAISIAAVALVYFGLAGYVWHLDTQRMENSSVLRSAVQQNNQVLGLLREKGCDYCHTPSASLPFYASFPIAKQ
LMEYDIRLGYSSFNLEPVRSALIKDRPQAQSDLNKIEWVMQHKTMPPARYVALHWAGQINPDEREIILAWIAQQRARYYA
SADTAQPHRNEPVQPIPKTLPVDGQKVALGFRLFHDPRLSGDNTLSCAHCHSLNTGGVDGRKTSVGVGGAVGPINAPTVF
NSVFNSEQFWDGRAPSLQAQAGGPPLNPIEMASKSWDEIINKLDKDPLLTRDFAAVYPQGLSGENITDAIAEFEKTLITP
NAPFDNWLRGDENAMTMQQKRGYQLFKDNKCATCHAGIILGGRSFEPLGLKRDFNFGEITTVDIGRMNVTSAVRDRLRQK
VPGLRNVAQTAPYFHRGDVATLDQAVKLMLRYQVGSELPQQDVDDIVAFLESLSGVYTPYRPE

Sequences:

>Translated_463_residues
MKKVTRIAAISIAAVALVYFGLAGYVWHLDTQRMENSSVLRSAVQQNNQVLGLLREKGCDYCHTPSASLPFYASFPIAKQ
LMEYDIRLGYSSFNLEPVRSALIKDRPQAQSDLNKIEWVMQHKTMPPARYVALHWAGQINPDEREIILAWIAQQRARYYA
SADTAQPHRNEPVQPIPKTLPVDGQKVALGFRLFHDPRLSGDNTLSCAHCHSLNTGGVDGRKTSVGVGGAVGPINAPTVF
NSVFNSEQFWDGRAPSLQAQAGGPPLNPIEMASKSWDEIINKLDKDPLLTRDFAAVYPQGLSGENITDAIAEFEKTLITP
NAPFDNWLRGDENAMTMQQKRGYQLFKDNKCATCHAGIILGGRSFEPLGLKRDFNFGEITTVDIGRMNVTSAVRDRLRQK
VPGLRNVAQTAPYFHRGDVATLDQAVKLMLRYQVGSELPQQDVDDIVAFLESLSGVYTPYRPE
>Mature_463_residues
MKKVTRIAAISIAAVALVYFGLAGYVWHLDTQRMENSSVLRSAVQQNNQVLGLLREKGCDYCHTPSASLPFYASFPIAKQ
LMEYDIRLGYSSFNLEPVRSALIKDRPQAQSDLNKIEWVMQHKTMPPARYVALHWAGQINPDEREIILAWIAQQRARYYA
SADTAQPHRNEPVQPIPKTLPVDGQKVALGFRLFHDPRLSGDNTLSCAHCHSLNTGGVDGRKTSVGVGGAVGPINAPTVF
NSVFNSEQFWDGRAPSLQAQAGGPPLNPIEMASKSWDEIINKLDKDPLLTRDFAAVYPQGLSGENITDAIAEFEKTLITP
NAPFDNWLRGDENAMTMQQKRGYQLFKDNKCATCHAGIILGGRSFEPLGLKRDFNFGEITTVDIGRMNVTSAVRDRLRQK
VPGLRNVAQTAPYFHRGDVATLDQAVKLMLRYQVGSELPQQDVDDIVAFLESLSGVYTPYRPE

Specific function: Unknown

COG id: COG1858

COG function: function code P; Cytochrome c peroxidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789935, Length=460, Percent_Identity=77.6086956521739, Blast_Score=766, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR004852 [H]

Pfam domain/function: PF03150 CCP_MauG; PF00034 Cytochrom_C [H]

EC number: =1.11.1.5 [H]

Molecular weight: Translated: 51445; Mature: 51445

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: PS51007 CYTC L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVTRIAAISIAAVALVYFGLAGYVWHLDTQRMENSSVLRSAVQQNNQVLGLLREKGCD
CCCHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHCCCCEEHHHHHCCCC
YCHTPSASLPFYASFPIAKQLMEYDIRLGYSSFNLEPVRSALIKDRPQAQSDLNKIEWVM
CCCCCCCCCCCEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHH
QHKTMPPARYVALHWAGQINPDEREIILAWIAQQRARYYASADTAQPHRNEPVQPIPKTL
HHCCCCCHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PVDGQKVALGFRLFHDPRLSGDNTLSCAHCHSLNTGGVDGRKTSVGVGGAVGPINAPTVF
CCCCCEEEEEEEEEECCCCCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
NSVFNSEQFWDGRAPSLQAQAGGPPLNPIEMASKSWDEIINKLDKDPLLTRDFAAVYPQG
HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCC
LSGENITDAIAEFEKTLITPNAPFDNWLRGDENAMTMQQKRGYQLFKDNKCATCHAGIIL
CCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHCCCCEECCCCCCEEECCEEE
GGRSFEPLGLKRDFNFGEITTVDIGRMNVTSAVRDRLRQKVPGLRNVAQTAPYFHRGDVA
CCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHH
TLDQAVKLMLRYQVGSELPQQDVDDIVAFLESLSGVYTPYRPE
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKKVTRIAAISIAAVALVYFGLAGYVWHLDTQRMENSSVLRSAVQQNNQVLGLLREKGCD
CCCHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHCCCCEEHHHHHCCCC
YCHTPSASLPFYASFPIAKQLMEYDIRLGYSSFNLEPVRSALIKDRPQAQSDLNKIEWVM
CCCCCCCCCCCEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHH
QHKTMPPARYVALHWAGQINPDEREIILAWIAQQRARYYASADTAQPHRNEPVQPIPKTL
HHCCCCCHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PVDGQKVALGFRLFHDPRLSGDNTLSCAHCHSLNTGGVDGRKTSVGVGGAVGPINAPTVF
CCCCCEEEEEEEEEECCCCCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
NSVFNSEQFWDGRAPSLQAQAGGPPLNPIEMASKSWDEIINKLDKDPLLTRDFAAVYPQG
HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCC
LSGENITDAIAEFEKTLITPNAPFDNWLRGDENAMTMQQKRGYQLFKDNKCATCHAGIIL
CCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHCCCCEECCCCCCEEECCEEE
GGRSFEPLGLKRDFNFGEITTVDIGRMNVTSAVRDRLRQKVPGLRNVAQTAPYFHRGDVA
CCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHH
TLDQAVKLMLRYQVGSELPQQDVDDIVAFLESLSGVYTPYRPE
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]