| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157370050
Identifier: 157370050
GI number: 157370050
Start: 1992358
End: 1994013
Strand: Reverse
Name: 157370050
Synonym: Spro_1808
Alternate gene names: NA
Gene position: 1994013-1992358 (Counterclockwise)
Preceding gene: 157370051
Following gene: 157370049
Centisome position: 36.6
GC content: 58.27
Gene sequence:
>1656_bases ATGAAAAAACCTGTATTTACCGCCGATGGCAACGTCTCGGCCGATATTGTGATCGTAGGCTCCGGCATCGTCGGCGGCAT GATGGCCGATCAATTGGTCAGCCAGGGTTATTCTGTGCTGGTGCTGGAAGCGGGCTTGCGCATCGAACGCGGCCAGGCGG TAGAGAACTGGCGCAATATGCCTTTTGACAACCGCGCCGGCTCAGATTACCAGGGGCTGTATCCACAATCTGAATTCGCC ACCGCGCCGCTCTACTTCCCGGAAAACAACTATGTTGCGCTGAGCGGCCCGAGCGCCGGCAGTTTCAAGCAGGGTTATCT GCGCACCGTCGGCGGCACCACCTGGCACTGGGCCGCCTCCTGCTGGCGCCACCTGCCCAGTGATTTCCAAATGAAAACGC TGTACGGCGTTGGCCGCGACTGGCCGATTTCCTACGACGAGCTGGAACCCTACTATTGCCGGGCCGAAGAAGAAATTGGC GTCGCCGGCCCCAACGATCCGCAACAGCAGTCCCCGGTTGAGCGCAGCAAACCTTACCCGATGGATATGGTGCCCTGGGC TCACGGCGACATCCGCTTTGCCGAGGTGGTAAACCCGCATGGTTACCGCTCCGTTCCCATCCCACAGGGGCGCAGTATCC ATCCGTGGAAAGGCCGGCCGACCTGCTGCGGTAACAATAACTGCCAACCCATTTGCCCGATAGGCGCCATGTACAACGGC ATTCATCATATTGAACGTGCTGAAATGAAAGGTGCGGTGGTGCTGGCCGAAGCGGTGGTCTACAAGATCGACACCGATGA GCAAAATCAGGTGACGGCAGTCCATTGGCTGGACAACAAAAAACAGTCCCACCGGGCCACGGCCAAAGCTTTTGCGTTAG CCTGTAACGGCATAGAAACCCCGCGCCTGCTGCTGATGGCGGCTAATGAGCGCAATCCCAACGGTATCGCCAACGCTTCC GATCAGGTGGGCCGCAATATGATGGACCATTCGGGCTTTCACTGTACCTTCCTGGCGAAAGAACCGCTGTGGCTGGGGCG TGGCCCGGCACAAAGCAGTTGTCTGGTTGGCCCACGTGACGGTGAGTTTCGCAAAGACTACTCGGCCAACAAAATGATCC TCAACAATATCAACCGGGTGGTACCGGCTACCCAGCAAGCGTTGGAAAAAGGTCTGGTCGGCAAAGAGTTGGACGCCGAA ATCCGCCGACGCGCCGCCTATGGCGTCGATTTATCCATCAGCCTGGAACCGTTACCAGACCCCAACAACCGCCTGACCCT GAGTAAAACCCGGAAAGATGCTCATGGCCTGCCTTGCCCGGACATCCACTACGACGTCGGCGACTATGTGCGTAAGGGCG CAGAGGCCGCGCATAAACAGTTGGAGCACATCGGCCAACTGTTTGATGCCGATGAATTCAACATCACCACCAGCCTGAAC GCCAATAACCATATTATGGGTGGCACCATCATGGGCCACAGCCCCGAAGACTCGGTGGTAGACGGCAATTGCCGTACTCA TGACCATGCCAACCTTTGGTTGCCGGGCGGCGGTGCCATTCCCTCCGCCAGCGTGGTGAACAGCACCCTGACCATGGCCG CATTGGGCATCAAGGCCGCCGATGATATTGCGCGCCAGCTGGCGGTGAAATCATGA
Upstream 100 bases:
>100_bases CGACGCGCTAATCGTTCCCACTTACTGCGGCAATGGACCGCTGTGGTGGACCGCAGCCCCGCCTGCCGTCAATGTTTCCT TGTGATCTAAGAGCCTTCTG
Downstream 100 bases:
>100_bases AAAAACAGCTAAAGCTGACGCTTTTGTCCCTGCTGTTACTCGGCAGTAGCGCCGCACAGGCGACAGACGACGGTGATTTA AGCGGTGCGGCGTTGATTAA
Product: putative dehydrogenase subunit
Products: NA
Alternate protein names: Oxidoreductase; Choline Dehydrogenase; FAD Dependent Oxidoreductase; Gluconate 2-Dehydrogenase; GMC Oxidoreductase Family Protein; 2-Keto-Gluconate Dehydrogenase; GMC Oxidoreductase; Dehydrogenase Subunit; GMC Oxidoreductase Family; Dehydrogenase; GMC Family Oxidoreductase; Glucose Dehydrogenase; Gluconate Dehydrogenase; Dehydrogenase Large Subunit Protein; Gluconate 2-Dehydrogenase Flavoprotein; Glucose-Methanol-Choline Family Oxidoreductase; Dehydrogenase Protein; Oxidoreductase GMC Family; Flavoprotein Related Choline Dehydrogenase; Glucose Dehydrogenase Subunit Alpha; Oxidoreductase-Like Protein; Dehydrogenase Subunit-Like Protein; Choline Dehydrogenase-Like Flavoprotein; 2-Keto-Gluconate Dehydrogenase Subunit; Oxidoreductase Protein; Dehydrogenase-Like Protein; Choline Dehydrogenase And Flavoproteins-Like Protein; Quinoprotein Glucose Dehydrogenase; Flavoproteins Oxidoreductases; L-Sorbose Dehydrogenase; Glucose Dehydrogenase Alpha Subunit; Oxidoreductase Chain; 2-Keto-Gluconate Dehydrogenase Subunit-Like; Dehydrogluconate Dehydrogenase; Glucoside 3-Dehydrogenase; N-Terminal Membrane-Anchored Dehydrogenase; Gluconate Dehydrogenase Subunit; Glucase Dehydrogenase Subunit Alpha; Transmembrane Dehydrogenase Protein; Fad Dependent Oxidoreductase; Gluconate 2-Dehydrogenase Alpha Chain; Dehydrogenase Subunit I; Dehydrogenase Transmembrane Protein; Solbitol Dehydrogenase Large Subunit
Number of amino acids: Translated: 551; Mature: 551
Protein sequence:
>551_residues MKKPVFTADGNVSADIVIVGSGIVGGMMADQLVSQGYSVLVLEAGLRIERGQAVENWRNMPFDNRAGSDYQGLYPQSEFA TAPLYFPENNYVALSGPSAGSFKQGYLRTVGGTTWHWAASCWRHLPSDFQMKTLYGVGRDWPISYDELEPYYCRAEEEIG VAGPNDPQQQSPVERSKPYPMDMVPWAHGDIRFAEVVNPHGYRSVPIPQGRSIHPWKGRPTCCGNNNCQPICPIGAMYNG IHHIERAEMKGAVVLAEAVVYKIDTDEQNQVTAVHWLDNKKQSHRATAKAFALACNGIETPRLLLMAANERNPNGIANAS DQVGRNMMDHSGFHCTFLAKEPLWLGRGPAQSSCLVGPRDGEFRKDYSANKMILNNINRVVPATQQALEKGLVGKELDAE IRRRAAYGVDLSISLEPLPDPNNRLTLSKTRKDAHGLPCPDIHYDVGDYVRKGAEAAHKQLEHIGQLFDADEFNITTSLN ANNHIMGGTIMGHSPEDSVVDGNCRTHDHANLWLPGGGAIPSASVVNSTLTMAALGIKAADDIARQLAVKS
Sequences:
>Translated_551_residues MKKPVFTADGNVSADIVIVGSGIVGGMMADQLVSQGYSVLVLEAGLRIERGQAVENWRNMPFDNRAGSDYQGLYPQSEFA TAPLYFPENNYVALSGPSAGSFKQGYLRTVGGTTWHWAASCWRHLPSDFQMKTLYGVGRDWPISYDELEPYYCRAEEEIG VAGPNDPQQQSPVERSKPYPMDMVPWAHGDIRFAEVVNPHGYRSVPIPQGRSIHPWKGRPTCCGNNNCQPICPIGAMYNG IHHIERAEMKGAVVLAEAVVYKIDTDEQNQVTAVHWLDNKKQSHRATAKAFALACNGIETPRLLLMAANERNPNGIANAS DQVGRNMMDHSGFHCTFLAKEPLWLGRGPAQSSCLVGPRDGEFRKDYSANKMILNNINRVVPATQQALEKGLVGKELDAE IRRRAAYGVDLSISLEPLPDPNNRLTLSKTRKDAHGLPCPDIHYDVGDYVRKGAEAAHKQLEHIGQLFDADEFNITTSLN ANNHIMGGTIMGHSPEDSVVDGNCRTHDHANLWLPGGGAIPSASVVNSTLTMAALGIKAADDIARQLAVKS >Mature_551_residues MKKPVFTADGNVSADIVIVGSGIVGGMMADQLVSQGYSVLVLEAGLRIERGQAVENWRNMPFDNRAGSDYQGLYPQSEFA TAPLYFPENNYVALSGPSAGSFKQGYLRTVGGTTWHWAASCWRHLPSDFQMKTLYGVGRDWPISYDELEPYYCRAEEEIG VAGPNDPQQQSPVERSKPYPMDMVPWAHGDIRFAEVVNPHGYRSVPIPQGRSIHPWKGRPTCCGNNNCQPICPIGAMYNG IHHIERAEMKGAVVLAEAVVYKIDTDEQNQVTAVHWLDNKKQSHRATAKAFALACNGIETPRLLLMAANERNPNGIANAS DQVGRNMMDHSGFHCTFLAKEPLWLGRGPAQSSCLVGPRDGEFRKDYSANKMILNNINRVVPATQQALEKGLVGKELDAE IRRRAAYGVDLSISLEPLPDPNNRLTLSKTRKDAHGLPCPDIHYDVGDYVRKGAEAAHKQLEHIGQLFDADEFNITTSLN ANNHIMGGTIMGHSPEDSVVDGNCRTHDHANLWLPGGGAIPSASVVNSTLTMAALGIKAADDIARQLAVKS
Specific function: Unknown
COG id: COG2303
COG function: function code E; Choline dehydrogenase and related flavoproteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60305; Mature: 60305
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKPVFTADGNVSADIVIVGSGIVGGMMADQLVSQGYSVLVLEAGLRIERGQAVENWRNM CCCCEEECCCCCEEEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCEEECCCHHHHHHCC PFDNRAGSDYQGLYPQSEFATAPLYFPENNYVALSGPSAGSFKQGYLRTVGGTTWHWAAS CCCCCCCCCCCCCCCCHHHCCCCEEECCCCEEEEECCCCCCCCCCHHHHCCCCCHHHHHH CWRHLPSDFQMKTLYGVGRDWPISYDELEPYYCRAEEEIGVAGPNDPQQQSPVERSKPYP HHHHCCCCCEEHHHHCCCCCCCCCHHCCCCEEECCCCCCCCCCCCCCHHCCCCHHCCCCC MDMVPWAHGDIRFAEVVNPHGYRSVPIPQGRSIHPWKGRPTCCGNNNCQPICPIGAMYNG CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHH IHHIERAEMKGAVVLAEAVVYKIDTDEQNQVTAVHWLDNKKQSHRATAKAFALACNGIET HHHHHHHHHCCEEEEEEEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCC PRLLLMAANERNPNGIANASDQVGRNMMDHSGFHCTFLAKEPLWLGRGPAQSSCLVGPRD CEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCEEECCCC GEFRKDYSANKMILNNINRVVPATQQALEKGLVGKELDAEIRRRAAYGVDLSISLEPLPD CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCCCC PNNRLTLSKTRKDAHGLPCPDIHYDVGDYVRKGAEAAHKQLEHIGQLFDADEFNITTSLN CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC ANNHIMGGTIMGHSPEDSVVDGNCRTHDHANLWLPGGGAIPSASVVNSTLTMAALGIKAA CCCEEECCEEECCCCCCCEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCHHH DDIARQLAVKS HHHHHHHHCCC >Mature Secondary Structure MKKPVFTADGNVSADIVIVGSGIVGGMMADQLVSQGYSVLVLEAGLRIERGQAVENWRNM CCCCEEECCCCCEEEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCEEECCCHHHHHHCC PFDNRAGSDYQGLYPQSEFATAPLYFPENNYVALSGPSAGSFKQGYLRTVGGTTWHWAAS CCCCCCCCCCCCCCCCHHHCCCCEEECCCCEEEEECCCCCCCCCCHHHHCCCCCHHHHHH CWRHLPSDFQMKTLYGVGRDWPISYDELEPYYCRAEEEIGVAGPNDPQQQSPVERSKPYP HHHHCCCCCEEHHHHCCCCCCCCCHHCCCCEEECCCCCCCCCCCCCCHHCCCCHHCCCCC MDMVPWAHGDIRFAEVVNPHGYRSVPIPQGRSIHPWKGRPTCCGNNNCQPICPIGAMYNG CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHH IHHIERAEMKGAVVLAEAVVYKIDTDEQNQVTAVHWLDNKKQSHRATAKAFALACNGIET HHHHHHHHHCCEEEEEEEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCC PRLLLMAANERNPNGIANASDQVGRNMMDHSGFHCTFLAKEPLWLGRGPAQSSCLVGPRD CEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCEEECCCC GEFRKDYSANKMILNNINRVVPATQQALEKGLVGKELDAEIRRRAAYGVDLSISLEPLPD CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCCCC PNNRLTLSKTRKDAHGLPCPDIHYDVGDYVRKGAEAAHKQLEHIGQLFDADEFNITTSLN CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC ANNHIMGGTIMGHSPEDSVVDGNCRTHDHANLWLPGGGAIPSASVVNSTLTMAALGIKAA CCCEEECCEEECCCCCCCEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCHHH DDIARQLAVKS HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA