Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

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The map label for this gene is 157370050

Identifier: 157370050

GI number: 157370050

Start: 1992358

End: 1994013

Strand: Reverse

Name: 157370050

Synonym: Spro_1808

Alternate gene names: NA

Gene position: 1994013-1992358 (Counterclockwise)

Preceding gene: 157370051

Following gene: 157370049

Centisome position: 36.6

GC content: 58.27

Gene sequence:

>1656_bases
ATGAAAAAACCTGTATTTACCGCCGATGGCAACGTCTCGGCCGATATTGTGATCGTAGGCTCCGGCATCGTCGGCGGCAT
GATGGCCGATCAATTGGTCAGCCAGGGTTATTCTGTGCTGGTGCTGGAAGCGGGCTTGCGCATCGAACGCGGCCAGGCGG
TAGAGAACTGGCGCAATATGCCTTTTGACAACCGCGCCGGCTCAGATTACCAGGGGCTGTATCCACAATCTGAATTCGCC
ACCGCGCCGCTCTACTTCCCGGAAAACAACTATGTTGCGCTGAGCGGCCCGAGCGCCGGCAGTTTCAAGCAGGGTTATCT
GCGCACCGTCGGCGGCACCACCTGGCACTGGGCCGCCTCCTGCTGGCGCCACCTGCCCAGTGATTTCCAAATGAAAACGC
TGTACGGCGTTGGCCGCGACTGGCCGATTTCCTACGACGAGCTGGAACCCTACTATTGCCGGGCCGAAGAAGAAATTGGC
GTCGCCGGCCCCAACGATCCGCAACAGCAGTCCCCGGTTGAGCGCAGCAAACCTTACCCGATGGATATGGTGCCCTGGGC
TCACGGCGACATCCGCTTTGCCGAGGTGGTAAACCCGCATGGTTACCGCTCCGTTCCCATCCCACAGGGGCGCAGTATCC
ATCCGTGGAAAGGCCGGCCGACCTGCTGCGGTAACAATAACTGCCAACCCATTTGCCCGATAGGCGCCATGTACAACGGC
ATTCATCATATTGAACGTGCTGAAATGAAAGGTGCGGTGGTGCTGGCCGAAGCGGTGGTCTACAAGATCGACACCGATGA
GCAAAATCAGGTGACGGCAGTCCATTGGCTGGACAACAAAAAACAGTCCCACCGGGCCACGGCCAAAGCTTTTGCGTTAG
CCTGTAACGGCATAGAAACCCCGCGCCTGCTGCTGATGGCGGCTAATGAGCGCAATCCCAACGGTATCGCCAACGCTTCC
GATCAGGTGGGCCGCAATATGATGGACCATTCGGGCTTTCACTGTACCTTCCTGGCGAAAGAACCGCTGTGGCTGGGGCG
TGGCCCGGCACAAAGCAGTTGTCTGGTTGGCCCACGTGACGGTGAGTTTCGCAAAGACTACTCGGCCAACAAAATGATCC
TCAACAATATCAACCGGGTGGTACCGGCTACCCAGCAAGCGTTGGAAAAAGGTCTGGTCGGCAAAGAGTTGGACGCCGAA
ATCCGCCGACGCGCCGCCTATGGCGTCGATTTATCCATCAGCCTGGAACCGTTACCAGACCCCAACAACCGCCTGACCCT
GAGTAAAACCCGGAAAGATGCTCATGGCCTGCCTTGCCCGGACATCCACTACGACGTCGGCGACTATGTGCGTAAGGGCG
CAGAGGCCGCGCATAAACAGTTGGAGCACATCGGCCAACTGTTTGATGCCGATGAATTCAACATCACCACCAGCCTGAAC
GCCAATAACCATATTATGGGTGGCACCATCATGGGCCACAGCCCCGAAGACTCGGTGGTAGACGGCAATTGCCGTACTCA
TGACCATGCCAACCTTTGGTTGCCGGGCGGCGGTGCCATTCCCTCCGCCAGCGTGGTGAACAGCACCCTGACCATGGCCG
CATTGGGCATCAAGGCCGCCGATGATATTGCGCGCCAGCTGGCGGTGAAATCATGA

Upstream 100 bases:

>100_bases
CGACGCGCTAATCGTTCCCACTTACTGCGGCAATGGACCGCTGTGGTGGACCGCAGCCCCGCCTGCCGTCAATGTTTCCT
TGTGATCTAAGAGCCTTCTG

Downstream 100 bases:

>100_bases
AAAAACAGCTAAAGCTGACGCTTTTGTCCCTGCTGTTACTCGGCAGTAGCGCCGCACAGGCGACAGACGACGGTGATTTA
AGCGGTGCGGCGTTGATTAA

Product: putative dehydrogenase subunit

Products: NA

Alternate protein names: Oxidoreductase; Choline Dehydrogenase; FAD Dependent Oxidoreductase; Gluconate 2-Dehydrogenase; GMC Oxidoreductase Family Protein; 2-Keto-Gluconate Dehydrogenase; GMC Oxidoreductase; Dehydrogenase Subunit; GMC Oxidoreductase Family; Dehydrogenase; GMC Family Oxidoreductase; Glucose Dehydrogenase; Gluconate Dehydrogenase; Dehydrogenase Large Subunit Protein; Gluconate 2-Dehydrogenase Flavoprotein; Glucose-Methanol-Choline Family Oxidoreductase; Dehydrogenase Protein; Oxidoreductase GMC Family; Flavoprotein Related Choline Dehydrogenase; Glucose Dehydrogenase Subunit Alpha; Oxidoreductase-Like Protein; Dehydrogenase Subunit-Like Protein; Choline Dehydrogenase-Like Flavoprotein; 2-Keto-Gluconate Dehydrogenase Subunit; Oxidoreductase Protein; Dehydrogenase-Like Protein; Choline Dehydrogenase And Flavoproteins-Like Protein; Quinoprotein Glucose Dehydrogenase; Flavoproteins Oxidoreductases; L-Sorbose Dehydrogenase; Glucose Dehydrogenase Alpha Subunit; Oxidoreductase Chain; 2-Keto-Gluconate Dehydrogenase Subunit-Like; Dehydrogluconate Dehydrogenase; Glucoside 3-Dehydrogenase; N-Terminal Membrane-Anchored Dehydrogenase; Gluconate Dehydrogenase Subunit; Glucase Dehydrogenase Subunit Alpha; Transmembrane Dehydrogenase Protein; Fad Dependent Oxidoreductase; Gluconate 2-Dehydrogenase Alpha Chain; Dehydrogenase Subunit I; Dehydrogenase Transmembrane Protein; Solbitol Dehydrogenase Large Subunit

Number of amino acids: Translated: 551; Mature: 551

Protein sequence:

>551_residues
MKKPVFTADGNVSADIVIVGSGIVGGMMADQLVSQGYSVLVLEAGLRIERGQAVENWRNMPFDNRAGSDYQGLYPQSEFA
TAPLYFPENNYVALSGPSAGSFKQGYLRTVGGTTWHWAASCWRHLPSDFQMKTLYGVGRDWPISYDELEPYYCRAEEEIG
VAGPNDPQQQSPVERSKPYPMDMVPWAHGDIRFAEVVNPHGYRSVPIPQGRSIHPWKGRPTCCGNNNCQPICPIGAMYNG
IHHIERAEMKGAVVLAEAVVYKIDTDEQNQVTAVHWLDNKKQSHRATAKAFALACNGIETPRLLLMAANERNPNGIANAS
DQVGRNMMDHSGFHCTFLAKEPLWLGRGPAQSSCLVGPRDGEFRKDYSANKMILNNINRVVPATQQALEKGLVGKELDAE
IRRRAAYGVDLSISLEPLPDPNNRLTLSKTRKDAHGLPCPDIHYDVGDYVRKGAEAAHKQLEHIGQLFDADEFNITTSLN
ANNHIMGGTIMGHSPEDSVVDGNCRTHDHANLWLPGGGAIPSASVVNSTLTMAALGIKAADDIARQLAVKS

Sequences:

>Translated_551_residues
MKKPVFTADGNVSADIVIVGSGIVGGMMADQLVSQGYSVLVLEAGLRIERGQAVENWRNMPFDNRAGSDYQGLYPQSEFA
TAPLYFPENNYVALSGPSAGSFKQGYLRTVGGTTWHWAASCWRHLPSDFQMKTLYGVGRDWPISYDELEPYYCRAEEEIG
VAGPNDPQQQSPVERSKPYPMDMVPWAHGDIRFAEVVNPHGYRSVPIPQGRSIHPWKGRPTCCGNNNCQPICPIGAMYNG
IHHIERAEMKGAVVLAEAVVYKIDTDEQNQVTAVHWLDNKKQSHRATAKAFALACNGIETPRLLLMAANERNPNGIANAS
DQVGRNMMDHSGFHCTFLAKEPLWLGRGPAQSSCLVGPRDGEFRKDYSANKMILNNINRVVPATQQALEKGLVGKELDAE
IRRRAAYGVDLSISLEPLPDPNNRLTLSKTRKDAHGLPCPDIHYDVGDYVRKGAEAAHKQLEHIGQLFDADEFNITTSLN
ANNHIMGGTIMGHSPEDSVVDGNCRTHDHANLWLPGGGAIPSASVVNSTLTMAALGIKAADDIARQLAVKS
>Mature_551_residues
MKKPVFTADGNVSADIVIVGSGIVGGMMADQLVSQGYSVLVLEAGLRIERGQAVENWRNMPFDNRAGSDYQGLYPQSEFA
TAPLYFPENNYVALSGPSAGSFKQGYLRTVGGTTWHWAASCWRHLPSDFQMKTLYGVGRDWPISYDELEPYYCRAEEEIG
VAGPNDPQQQSPVERSKPYPMDMVPWAHGDIRFAEVVNPHGYRSVPIPQGRSIHPWKGRPTCCGNNNCQPICPIGAMYNG
IHHIERAEMKGAVVLAEAVVYKIDTDEQNQVTAVHWLDNKKQSHRATAKAFALACNGIETPRLLLMAANERNPNGIANAS
DQVGRNMMDHSGFHCTFLAKEPLWLGRGPAQSSCLVGPRDGEFRKDYSANKMILNNINRVVPATQQALEKGLVGKELDAE
IRRRAAYGVDLSISLEPLPDPNNRLTLSKTRKDAHGLPCPDIHYDVGDYVRKGAEAAHKQLEHIGQLFDADEFNITTSLN
ANNHIMGGTIMGHSPEDSVVDGNCRTHDHANLWLPGGGAIPSASVVNSTLTMAALGIKAADDIARQLAVKS

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60305; Mature: 60305

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPVFTADGNVSADIVIVGSGIVGGMMADQLVSQGYSVLVLEAGLRIERGQAVENWRNM
CCCCEEECCCCCEEEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCEEECCCHHHHHHCC
PFDNRAGSDYQGLYPQSEFATAPLYFPENNYVALSGPSAGSFKQGYLRTVGGTTWHWAAS
CCCCCCCCCCCCCCCCHHHCCCCEEECCCCEEEEECCCCCCCCCCHHHHCCCCCHHHHHH
CWRHLPSDFQMKTLYGVGRDWPISYDELEPYYCRAEEEIGVAGPNDPQQQSPVERSKPYP
HHHHCCCCCEEHHHHCCCCCCCCCHHCCCCEEECCCCCCCCCCCCCCHHCCCCHHCCCCC
MDMVPWAHGDIRFAEVVNPHGYRSVPIPQGRSIHPWKGRPTCCGNNNCQPICPIGAMYNG
CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHH
IHHIERAEMKGAVVLAEAVVYKIDTDEQNQVTAVHWLDNKKQSHRATAKAFALACNGIET
HHHHHHHHHCCEEEEEEEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCC
PRLLLMAANERNPNGIANASDQVGRNMMDHSGFHCTFLAKEPLWLGRGPAQSSCLVGPRD
CEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCEEECCCC
GEFRKDYSANKMILNNINRVVPATQQALEKGLVGKELDAEIRRRAAYGVDLSISLEPLPD
CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCCCC
PNNRLTLSKTRKDAHGLPCPDIHYDVGDYVRKGAEAAHKQLEHIGQLFDADEFNITTSLN
CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
ANNHIMGGTIMGHSPEDSVVDGNCRTHDHANLWLPGGGAIPSASVVNSTLTMAALGIKAA
CCCEEECCEEECCCCCCCEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCHHH
DDIARQLAVKS
HHHHHHHHCCC
>Mature Secondary Structure
MKKPVFTADGNVSADIVIVGSGIVGGMMADQLVSQGYSVLVLEAGLRIERGQAVENWRNM
CCCCEEECCCCCEEEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCEEECCCHHHHHHCC
PFDNRAGSDYQGLYPQSEFATAPLYFPENNYVALSGPSAGSFKQGYLRTVGGTTWHWAAS
CCCCCCCCCCCCCCCCHHHCCCCEEECCCCEEEEECCCCCCCCCCHHHHCCCCCHHHHHH
CWRHLPSDFQMKTLYGVGRDWPISYDELEPYYCRAEEEIGVAGPNDPQQQSPVERSKPYP
HHHHCCCCCEEHHHHCCCCCCCCCHHCCCCEEECCCCCCCCCCCCCCHHCCCCHHCCCCC
MDMVPWAHGDIRFAEVVNPHGYRSVPIPQGRSIHPWKGRPTCCGNNNCQPICPIGAMYNG
CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHH
IHHIERAEMKGAVVLAEAVVYKIDTDEQNQVTAVHWLDNKKQSHRATAKAFALACNGIET
HHHHHHHHHCCEEEEEEEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCC
PRLLLMAANERNPNGIANASDQVGRNMMDHSGFHCTFLAKEPLWLGRGPAQSSCLVGPRD
CEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCEEECCCC
GEFRKDYSANKMILNNINRVVPATQQALEKGLVGKELDAEIRRRAAYGVDLSISLEPLPD
CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCCCC
PNNRLTLSKTRKDAHGLPCPDIHYDVGDYVRKGAEAAHKQLEHIGQLFDADEFNITTSLN
CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
ANNHIMGGTIMGHSPEDSVVDGNCRTHDHANLWLPGGGAIPSASVVNSTLTMAALGIKAA
CCCEEECCEEECCCCCCCEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCHHH
DDIARQLAVKS
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA