| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is adhB [H]
Identifier: 157370049
GI number: 157370049
Start: 1990952
End: 1992361
Strand: Reverse
Name: adhB [H]
Synonym: Spro_1807
Alternate gene names: 157370049
Gene position: 1992361-1990952 (Counterclockwise)
Preceding gene: 157370050
Following gene: 157370047
Centisome position: 36.56
GC content: 58.37
Gene sequence:
>1410_bases ATGAAAAAACAGCTAAAGCTGACGCTTTTGTCCCTGCTGTTACTCGGCAGTAGCGCCGCACAGGCGACAGACGACGGTGA TTTAAGCGGTGCGGCGTTGATTAAAAAAGGCGAGCAGGTTGCCATCGCCTCCGACTGTCAGGCATGCCATACCAAACCGG AGGGCGGTGCGCCGTTTACCGGCGGTTATGGCATCAGTTCCCCCATGGGAATGATTTACGCCACCAACATCACCCCGTCC AACGTCGAGGGTATCGGCAGCTACAGCGAAGAGCAGTTTGCCCGCGCGGTCAGGGACGGTATCCGTGCCGATGGCACCCA CCTCTACCCCGCCATGCCCTATACCTCTTATACCCGCTTGAGCGACGCGGACATCCGGGCGCTGTACACCTACTTTATGC ACGCGGTGAAACCGGTCGATCAGAAAAATACGCTGACCGATCTGCCGTTTCCGTTCAATCTGCGCTTTAGCATGGCGGCC TGGAATCTGCTGTTTCTGAAAGAGGGGCGCTTTGCGCCAGACGCCGGTAAAAGCGAACAATGGAATCGGGGCGCCTATCT GGTCAATGGTCCAGGACACTGCGATACCTGCCACACCCCACGCAACCTGCTGATGGCTGAAGACGATAGTCAGCCCTTGG CGGGCGGTATGGTCGGCAGTTGGTATGCGCCCAACATCACTTCAGATCCGGTCAGCGGTATTGGTGGCTGGAGCCAGCAG CAATTGGTGCAGTACTTGAAAACCGGCCAGGTGGCCGGTAAGAACCAGGCCGCCGGCGGCATGGCGGAAGCGATCGAAAA CAGCCTGCAGTACTTTTCCGATGAGGATTTATCGGCCATCGCCGTTTACCTGAAAAGCACTGCCCCGATCAGGGACCGCC ATGACAGCCAGGCGGCCGACAGCTATGGCAAGCCGACAAACGTTGAGCCTCAGTTGCGCGGGCTACACCCTGCCACGGCC AATAACACTCTGACCGATGGCGCCGCGCTGTTTAGCGGCAACTGCGCCAGTTGCCACCAGCCGGACGGTAGCGGCAGTAA AAATCAGGCTTACCCTTCGCTGTTCAATAACACGGCCACCGGTTCAGGTAACCCGGCCAACCTGATCTCGGCGATTCTGT TCGGCGTTGAACGAAGGGTCGGCGGTGAACACGTGCTGATGCCGAACTTTGGCCCCCAGTCGTATGTTAATCCTCTAAAC GACCAGCAGATTGCCGCTATCAGCAATTATGTCCTGCAGCAGTATGGCAATCCTGCGGTTAAGGTCAGCGCCACGGACGT CGCCGTATTGCGGCAAGGTGGCCCGATCCCGCTGCTGGCCCGGTTGCAGCCTTATATGGCTCCGGCAATCGGCTTGGCGG TACTGGCCTTGCTCATCCTGGTCTGGCTGGTAGGGAGAAAACGGCGTTAA
Upstream 100 bases:
>100_bases GTGCCATTCCCTCCGCCAGCGTGGTGAACAGCACCCTGACCATGGCCGCATTGGGCATCAAGGCCGCCGATGATATTGCG CGCCAGCTGGCGGTGAAATC
Downstream 100 bases:
>100_bases ATGCTGTGACTGCAGGCTGGGGAGCTATCCCCGGCTTGCAGGTTTGGCCGCAAGCCACGCAGGGATAGTTTTTGCCTTCA TCCTGAGGAATTCGGCATGG
Product: gluconate 2-dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MKKQLKLTLLSLLLLGSSAAQATDDGDLSGAALIKKGEQVAIASDCQACHTKPEGGAPFTGGYGISSPMGMIYATNITPS NVEGIGSYSEEQFARAVRDGIRADGTHLYPAMPYTSYTRLSDADIRALYTYFMHAVKPVDQKNTLTDLPFPFNLRFSMAA WNLLFLKEGRFAPDAGKSEQWNRGAYLVNGPGHCDTCHTPRNLLMAEDDSQPLAGGMVGSWYAPNITSDPVSGIGGWSQQ QLVQYLKTGQVAGKNQAAGGMAEAIENSLQYFSDEDLSAIAVYLKSTAPIRDRHDSQAADSYGKPTNVEPQLRGLHPATA NNTLTDGAALFSGNCASCHQPDGSGSKNQAYPSLFNNTATGSGNPANLISAILFGVERRVGGEHVLMPNFGPQSYVNPLN DQQIAAISNYVLQQYGNPAVKVSATDVAVLRQGGPIPLLARLQPYMAPAIGLAVLALLILVWLVGRKRR
Sequences:
>Translated_469_residues MKKQLKLTLLSLLLLGSSAAQATDDGDLSGAALIKKGEQVAIASDCQACHTKPEGGAPFTGGYGISSPMGMIYATNITPS NVEGIGSYSEEQFARAVRDGIRADGTHLYPAMPYTSYTRLSDADIRALYTYFMHAVKPVDQKNTLTDLPFPFNLRFSMAA WNLLFLKEGRFAPDAGKSEQWNRGAYLVNGPGHCDTCHTPRNLLMAEDDSQPLAGGMVGSWYAPNITSDPVSGIGGWSQQ QLVQYLKTGQVAGKNQAAGGMAEAIENSLQYFSDEDLSAIAVYLKSTAPIRDRHDSQAADSYGKPTNVEPQLRGLHPATA NNTLTDGAALFSGNCASCHQPDGSGSKNQAYPSLFNNTATGSGNPANLISAILFGVERRVGGEHVLMPNFGPQSYVNPLN DQQIAAISNYVLQQYGNPAVKVSATDVAVLRQGGPIPLLARLQPYMAPAIGLAVLALLILVWLVGRKRR >Mature_469_residues MKKQLKLTLLSLLLLGSSAAQATDDGDLSGAALIKKGEQVAIASDCQACHTKPEGGAPFTGGYGISSPMGMIYATNITPS NVEGIGSYSEEQFARAVRDGIRADGTHLYPAMPYTSYTRLSDADIRALYTYFMHAVKPVDQKNTLTDLPFPFNLRFSMAA WNLLFLKEGRFAPDAGKSEQWNRGAYLVNGPGHCDTCHTPRNLLMAEDDSQPLAGGMVGSWYAPNITSDPVSGIGGWSQQ QLVQYLKTGQVAGKNQAAGGMAEAIENSLQYFSDEDLSAIAVYLKSTAPIRDRHDSQAADSYGKPTNVEPQLRGLHPATA NNTLTDGAALFSGNCASCHQPDGSGSKNQAYPSLFNNTATGSGNPANLISAILFGVERRVGGEHVLMPNFGPQSYVNPLN DQQIAAISNYVLQQYGNPAVKVSATDVAVLRQGGPIPLLARLQPYMAPAIGLAVLALLILVWLVGRKRR
Specific function: Dehydration of primary alcohols (exception:methanol) [H]
COG id: COG2010
COG function: function code C; Cytochrome c, mono- and diheme variants
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 cytochrome c domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR003088 - InterPro: IPR014353 [H]
Pfam domain/function: PF00034 Cytochrom_C [H]
EC number: NA
Molecular weight: Translated: 50084; Mature: 50084
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQLKLTLLSLLLLGSSAAQATDDGDLSGAALIKKGEQVAIASDCQACHTKPEGGAPFT CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCEEEEHHHHHHHCCCCCCCCCCC GGYGISSPMGMIYATNITPSNVEGIGSYSEEQFARAVRDGIRADGTHLYPAMPYTSYTRL CCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCC SDADIRALYTYFMHAVKPVDQKNTLTDLPFPFNLRFSMAAWNLLFLKEGRFAPDAGKSEQ CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHEEEEEEECCCCCCCCCCCCC WNRGAYLVNGPGHCDTCHTPRNLLMAEDDSQPLAGGMVGSWYAPNITSDPVSGIGGWSQQ CCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH QLVQYLKTGQVAGKNQAAGGMAEAIENSLQYFSDEDLSAIAVYLKSTAPIRDRHDSQAAD HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHH SYGKPTNVEPQLRGLHPATANNTLTDGAALFSGNCASCHQPDGSGSKNQAYPSLFNNTAT HCCCCCCCCHHHCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCCCCCHHHHCCCCC GSGNPANLISAILFGVERRVGGEHVLMPNFGPQSYVNPLNDQQIAAISNYVLQQYGNPAV CCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCEE KVSATDVAVLRQGGPIPLLARLQPYMAPAIGLAVLALLILVWLVGRKRR EEECCHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKKQLKLTLLSLLLLGSSAAQATDDGDLSGAALIKKGEQVAIASDCQACHTKPEGGAPFT CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCEEEEHHHHHHHCCCCCCCCCCC GGYGISSPMGMIYATNITPSNVEGIGSYSEEQFARAVRDGIRADGTHLYPAMPYTSYTRL CCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCCC SDADIRALYTYFMHAVKPVDQKNTLTDLPFPFNLRFSMAAWNLLFLKEGRFAPDAGKSEQ CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHEEEEEEECCCCCCCCCCCCC WNRGAYLVNGPGHCDTCHTPRNLLMAEDDSQPLAGGMVGSWYAPNITSDPVSGIGGWSQQ CCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH QLVQYLKTGQVAGKNQAAGGMAEAIENSLQYFSDEDLSAIAVYLKSTAPIRDRHDSQAAD HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHH SYGKPTNVEPQLRGLHPATANNTLTDGAALFSGNCASCHQPDGSGSKNQAYPSLFNNTAT HCCCCCCCCHHHCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCCCCCHHHHCCCCC GSGNPANLISAILFGVERRVGGEHVLMPNFGPQSYVNPLNDQQIAAISNYVLQQYGNPAV CCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCEE KVSATDVAVLRQGGPIPLLARLQPYMAPAIGLAVLALLILVWLVGRKRR EEECCHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA