| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157370032
Identifier: 157370032
GI number: 157370032
Start: 1968619
End: 1970997
Strand: Direct
Name: 157370032
Synonym: Spro_1790
Alternate gene names: NA
Gene position: 1968619-1970997 (Clockwise)
Preceding gene: 157370031
Following gene: 157370033
Centisome position: 36.13
GC content: 57.21
Gene sequence:
>2379_bases GTGAGTGCAAACCCGATTTCTTTTTTCAGCCATAACCACCACCTGCTGGCGATAAAAGGATGTGAGTCAGAACTTGATGT GCTGGCGTTTGAAGGCAACGAGGCCCTGAGCAAGCCGTTCAGTTACCGCATTGAGTTCACCAGTAACGACCACACCATCA GCAAGGAAATGATGCTGATGAAAGCGGGCTCTTTGACGCTACAGGCCCCGGCAGACCAGGGGTACGGCATTAAAATTCAG CAATCGGTACGGGTTCTCCAGGGGGTGGTGAGCGGTTTTGAACGTCTCAACACCTCAAAAGATGAAACCCATTACGCCCT GACGCTACAGCCGCGTCTGGCATTGCTCGACCGCTCGCATCAGAACGCGGTTTATCAGGATATGTCGGTGCCGCAGATTG TGGAAAAAATCCTGCGCGAGCGCCACAACCTGCGCGGCCAGGATTTTCTGTTCTCGCTGACCAGAGAATACCCGCGGCGT GAACAGGTGATGCAGTACGGCGAGGATGACCTGCACTTTATCACCCGCCTGCTGGGTGAGGTGGGTATCTGGTTCCGCTT TACCACCGACACGCGCCTGAACATCGACGTGGTGGAGTTCTACGACAGCCGGCAGGGCTACGAGAAAGGCCTGATTCTGC CGTCTGTACCGCCGTCGGGCCAGCACTCGCAAGGCATGGATTCGGTATGGGGGATGGAGAGCTATCACAACGTGGTGCAA AAGCAGGTCAGCACCCGCGATTACAACTACCGCCAGGCCAACAACGACATGAACACCCAGGTGGATGCGACCCGCGGTGA CAGCACCACCTACGGCGAGGCTTATCACTATGCCGACAACTACCTGACACCGGGCAGTACCTATGACCGCAATCCGGCCC CGGAGTCCGGGGCGTTTTATGCCCGTATACGTCACGAACGCTACCTGAACGGCCAGACCCAACTGAGCGCCATCACCAGT TGCCCGACACTGGCGCCCGGACTGGTACTGAAAGTCACCGGCGGTTATGAAGTGACGGAGGCGTTCAGCCAGGGTGTGCT CATCACCGGGATGAAAAGCGCGGCCCGCCGAGATAAAGATTTTGAGGTGCATTTCAGCGGTATCCCGGACAGCACCGATT TTGGCTTCCGCCCTGAACCCGGTGCGCGTCCGGTAATGGCCGGCACTTTACCAGCCCGCGTCACCAGTACCACCGAAAAT GACACCTACGGGCATATCGATAAAGATGGCCGCTATCGCGTCAACATGCTGTTTGACCGTGATAACTGGGAGACCGGGTT CGAGAGCCTGTGGGTGCGTCAGTCCCGCCCCTATGCCGGCGACACTTATGGTCTGCACCTGCCGCTGCTGGCGGGAACCG AGGTGGCGATTGGTTTTGAAGACGGCAACCCGGACCGGCCCTATATTGCCGGGGTGCTGCACGACTCCGCGCACGACGAT CACGTCACCATCCGCAACTACAAGCGCAACGTACTGCGCACACCGAGCAACAACAAAATCCGCCTCGATGACAGCCGGGG CCAGGAACATATCAAGATCTCGACGGAGTATGGCGGCAAGAGCCAGCTGAATCTCGGGCATCTCGTCGATAGCGAGAAGC AAAAACGGGGCGAGGGTTTTGAACTCAGAACCGACAGCTGGGGCGCGATTCGGGCGCAGAAGGGCATTTTCATCAGTGCC GATGGTCAGGCAAAGGCGCAGGGCCAGGTGCTGGAGATGGAGCCAGCGATCAGCCTGCTAAAAGGGGCGCTAAATCAGGT AACCGGATGGGGAACTATTACGCAGACGCACCATAATATTGCTCCTGATGCAGAGCCACTAAGAGAATTTGTTTCCGGTG CCAGCGAGCTTAAAGAACCTGCGTTGCTGCTGTCTGCTCCGAAGGGGATTGCCGCCGTCACGCCGGAAACGACTCTGATA CACAGTGGGAAAGGGCTGTACCTGCAGAGCCTGGGCGAAGTCAATATCAGCACAGCACAGCGCTATTCGGTAAACGCCAG TAAGGCAATCTCGATTCTCTCGCAACAGGAAGGAATACGCCTGGTCTCTGCCAAAGGCCCGCTGGCGGTGGAATCCCACG CGGATACGCTGTCACTCACATCGATGAAGGATGTCACGGTTCAGTCCACCCAGGGGCACCTGCAACTGACGGCAAAGAAT GGGATCACGCTTGCCTGTGGCGGTGCTTACATCCAACTGACCCCACAGGGCGAAATCAACGTGCATGGTCCAGGTCTGCT AAGTCTCAAAGGGCAGCACAAATTACAGGGCCCGACGAGTGAGGATTATCCGCTGCCTGAATTGCCTTCGTCGGTGTGCA AAGAGTGTCTGAAAAAGGCGCAGCAGGCTGCACAAGGCTTTGTGCCAAGGGAGGTATAA
Upstream 100 bases:
>100_bases GATGCGTTACAGGAACAACCTGCGGTCTGATGGGCCCCGACTCAGTCGCAGGGAGTGGAAACGCCGGTGTACCGGCTGCA AAGATAATAAGGACATTACC
Downstream 100 bases:
>100_bases GTGAACATGACACGCATTGCTGACTGGGTGAATCTGCTGGAGCAAACCTGCGCTAATATTGAAATGGCCCACCTTGATTT TATTATCGACCAGTGCGGTA
Product: Rhs element Vgr protein
Products: NA
Alternate protein names: Type VI Secretion System Vgr Family Protein; Rhs Element Vgr Family Protein; VGR-Related Protein; Rhs Family Protein; Vgr-Related Protein; VGR-Like Protein; Rhs-Family Protein; Rhs Element Vgr Family; VgrG Protein; Vgr Related Protein; Replication/Virulence Associated Protein; Type VI Secretion System Rhs Element Vgr Protein; VGR-Related Type VI Secretion System Protein; Vgr Protein; Rhs Accessory Genetic Element; Rhs Element Vgr Protein Subfamily; Rhs Element Protein VgrE
Number of amino acids: Translated: 792; Mature: 791
Protein sequence:
>792_residues MSANPISFFSHNHHLLAIKGCESELDVLAFEGNEALSKPFSYRIEFTSNDHTISKEMMLMKAGSLTLQAPADQGYGIKIQ QSVRVLQGVVSGFERLNTSKDETHYALTLQPRLALLDRSHQNAVYQDMSVPQIVEKILRERHNLRGQDFLFSLTREYPRR EQVMQYGEDDLHFITRLLGEVGIWFRFTTDTRLNIDVVEFYDSRQGYEKGLILPSVPPSGQHSQGMDSVWGMESYHNVVQ KQVSTRDYNYRQANNDMNTQVDATRGDSTTYGEAYHYADNYLTPGSTYDRNPAPESGAFYARIRHERYLNGQTQLSAITS CPTLAPGLVLKVTGGYEVTEAFSQGVLITGMKSAARRDKDFEVHFSGIPDSTDFGFRPEPGARPVMAGTLPARVTSTTEN DTYGHIDKDGRYRVNMLFDRDNWETGFESLWVRQSRPYAGDTYGLHLPLLAGTEVAIGFEDGNPDRPYIAGVLHDSAHDD HVTIRNYKRNVLRTPSNNKIRLDDSRGQEHIKISTEYGGKSQLNLGHLVDSEKQKRGEGFELRTDSWGAIRAQKGIFISA DGQAKAQGQVLEMEPAISLLKGALNQVTGWGTITQTHHNIAPDAEPLREFVSGASELKEPALLLSAPKGIAAVTPETTLI HSGKGLYLQSLGEVNISTAQRYSVNASKAISILSQQEGIRLVSAKGPLAVESHADTLSLTSMKDVTVQSTQGHLQLTAKN GITLACGGAYIQLTPQGEINVHGPGLLSLKGQHKLQGPTSEDYPLPELPSSVCKECLKKAQQAAQGFVPREV
Sequences:
>Translated_792_residues MSANPISFFSHNHHLLAIKGCESELDVLAFEGNEALSKPFSYRIEFTSNDHTISKEMMLMKAGSLTLQAPADQGYGIKIQ QSVRVLQGVVSGFERLNTSKDETHYALTLQPRLALLDRSHQNAVYQDMSVPQIVEKILRERHNLRGQDFLFSLTREYPRR EQVMQYGEDDLHFITRLLGEVGIWFRFTTDTRLNIDVVEFYDSRQGYEKGLILPSVPPSGQHSQGMDSVWGMESYHNVVQ KQVSTRDYNYRQANNDMNTQVDATRGDSTTYGEAYHYADNYLTPGSTYDRNPAPESGAFYARIRHERYLNGQTQLSAITS CPTLAPGLVLKVTGGYEVTEAFSQGVLITGMKSAARRDKDFEVHFSGIPDSTDFGFRPEPGARPVMAGTLPARVTSTTEN DTYGHIDKDGRYRVNMLFDRDNWETGFESLWVRQSRPYAGDTYGLHLPLLAGTEVAIGFEDGNPDRPYIAGVLHDSAHDD HVTIRNYKRNVLRTPSNNKIRLDDSRGQEHIKISTEYGGKSQLNLGHLVDSEKQKRGEGFELRTDSWGAIRAQKGIFISA DGQAKAQGQVLEMEPAISLLKGALNQVTGWGTITQTHHNIAPDAEPLREFVSGASELKEPALLLSAPKGIAAVTPETTLI HSGKGLYLQSLGEVNISTAQRYSVNASKAISILSQQEGIRLVSAKGPLAVESHADTLSLTSMKDVTVQSTQGHLQLTAKN GITLACGGAYIQLTPQGEINVHGPGLLSLKGQHKLQGPTSEDYPLPELPSSVCKECLKKAQQAAQGFVPREV >Mature_791_residues SANPISFFSHNHHLLAIKGCESELDVLAFEGNEALSKPFSYRIEFTSNDHTISKEMMLMKAGSLTLQAPADQGYGIKIQQ SVRVLQGVVSGFERLNTSKDETHYALTLQPRLALLDRSHQNAVYQDMSVPQIVEKILRERHNLRGQDFLFSLTREYPRRE QVMQYGEDDLHFITRLLGEVGIWFRFTTDTRLNIDVVEFYDSRQGYEKGLILPSVPPSGQHSQGMDSVWGMESYHNVVQK QVSTRDYNYRQANNDMNTQVDATRGDSTTYGEAYHYADNYLTPGSTYDRNPAPESGAFYARIRHERYLNGQTQLSAITSC PTLAPGLVLKVTGGYEVTEAFSQGVLITGMKSAARRDKDFEVHFSGIPDSTDFGFRPEPGARPVMAGTLPARVTSTTEND TYGHIDKDGRYRVNMLFDRDNWETGFESLWVRQSRPYAGDTYGLHLPLLAGTEVAIGFEDGNPDRPYIAGVLHDSAHDDH VTIRNYKRNVLRTPSNNKIRLDDSRGQEHIKISTEYGGKSQLNLGHLVDSEKQKRGEGFELRTDSWGAIRAQKGIFISAD GQAKAQGQVLEMEPAISLLKGALNQVTGWGTITQTHHNIAPDAEPLREFVSGASELKEPALLLSAPKGIAAVTPETTLIH SGKGLYLQSLGEVNISTAQRYSVNASKAISILSQQEGIRLVSAKGPLAVESHADTLSLTSMKDVTVQSTQGHLQLTAKNG ITLACGGAYIQLTPQGEINVHGPGLLSLKGQHKLQGPTSEDYPLPELPSSVCKECLKKAQQAAQGFVPREV
Specific function: Unknown
COG id: COG3501
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87571; Mature: 87440
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSANPISFFSHNHHLLAIKGCESELDVLAFEGNEALSKPFSYRIEFTSNDHTISKEMMLM CCCCCCEEECCCCEEEEEECCCCCCEEEEECCCHHHCCCEEEEEEEECCCCCHHHHHHEE KAGSLTLQAPADQGYGIKIQQSVRVLQGVVSGFERLNTSKDETHYALTLQPRLALLDRSH ECCCEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHCCCC QNAVYQDMSVPQIVEKILRERHNLRGQDFLFSLTREYPRREQVMQYGEDDLHFITRLLGE CCHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHC VGIWFRFTTDTRLNIDVVEFYDSRQGYEKGLILPSVPPSGQHSQGMDSVWGMESYHNVVQ CCEEEEEECCCEEEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCHHHCCHHHHHHHHH KQVSTRDYNYRQANNDMNTQVDATRGDSTTYGEAYHYADNYLTPGSTYDRNPAPESGAFY HHHHCCCCCCEECCCCCCCEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEE ARIRHERYLNGQTQLSAITSCPTLAPGLVLKVTGGYEVTEAFSQGVLITGMKSAARRDKD EEEEHHHHCCCCHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHCCEEEEECHHHHCCCCC FEVHFSGIPDSTDFGFRPEPGARPVMAGTLPARVTSTTENDTYGHIDKDGRYRVNMLFDR EEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCCEEEEEEEEC DNWETGFESLWVRQSRPYAGDTYGLHLPLLAGTEVAIGFEDGNPDRPYIAGVLHDSAHDD CCCCCCHHHHEEECCCCCCCCCCCEEEEEEECCEEEEEECCCCCCCCEEEEEEECCCCCC HVTIRNYKRNVLRTPSNNKIRLDDSRGQEHIKISTEYGGKSQLNLGHLVDSEKQKRGEGF EEEEECCCCHHEECCCCCEEEEECCCCCCEEEEEECCCCCCCCCHHHHCCCHHHHCCCCE ELRTDSWGAIRAQKGIFISADGQAKAQGQVLEMEPAISLLKGALNQVTGWGTITQTHHNI EEECCCCCEEEECCCEEEECCCCCCCCCCEEEECHHHHHHHHHHHHHCCCCCEEECCCCC APDAEPLREFVSGASELKEPALLLSAPKGIAAVTPETTLIHSGKGLYLQSLGEVNISTAQ CCCHHHHHHHHHCHHHHCCCEEEEECCCCCEEECCCCEEEECCCCEEEECCCCEECCCCE RYSVNASKAISILSQQEGIRLVSAKGPLAVESHADTLSLTSMKDVTVQSTQGHLQLTAKN EEECCHHHHHHHHHHCCCEEEEECCCCEEEECCCCEEEECCCCCEEEEECCCEEEEEECC GITLACGGAYIQLTPQGEINVHGPGLLSLKGQHKLQGPTSEDYPLPELPSSVCKECLKKA CEEEEECCEEEEEECCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH QQAAQGFVPREV HHHHHCCCCCCC >Mature Secondary Structure SANPISFFSHNHHLLAIKGCESELDVLAFEGNEALSKPFSYRIEFTSNDHTISKEMMLM CCCCCEEECCCCEEEEEECCCCCCEEEEECCCHHHCCCEEEEEEEECCCCCHHHHHHEE KAGSLTLQAPADQGYGIKIQQSVRVLQGVVSGFERLNTSKDETHYALTLQPRLALLDRSH ECCCEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHCCCC QNAVYQDMSVPQIVEKILRERHNLRGQDFLFSLTREYPRREQVMQYGEDDLHFITRLLGE CCHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHC VGIWFRFTTDTRLNIDVVEFYDSRQGYEKGLILPSVPPSGQHSQGMDSVWGMESYHNVVQ CCEEEEEECCCEEEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCHHHCCHHHHHHHHH KQVSTRDYNYRQANNDMNTQVDATRGDSTTYGEAYHYADNYLTPGSTYDRNPAPESGAFY HHHHCCCCCCEECCCCCCCEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEE ARIRHERYLNGQTQLSAITSCPTLAPGLVLKVTGGYEVTEAFSQGVLITGMKSAARRDKD EEEEHHHHCCCCHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHCCEEEEECHHHHCCCCC FEVHFSGIPDSTDFGFRPEPGARPVMAGTLPARVTSTTENDTYGHIDKDGRYRVNMLFDR EEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCCEEEEEEEEC DNWETGFESLWVRQSRPYAGDTYGLHLPLLAGTEVAIGFEDGNPDRPYIAGVLHDSAHDD CCCCCCHHHHEEECCCCCCCCCCCEEEEEEECCEEEEEECCCCCCCCEEEEEEECCCCCC HVTIRNYKRNVLRTPSNNKIRLDDSRGQEHIKISTEYGGKSQLNLGHLVDSEKQKRGEGF EEEEECCCCHHEECCCCCEEEEECCCCCCEEEEEECCCCCCCCCHHHHCCCHHHHCCCCE ELRTDSWGAIRAQKGIFISADGQAKAQGQVLEMEPAISLLKGALNQVTGWGTITQTHHNI EEECCCCCEEEECCCEEEECCCCCCCCCCEEEECHHHHHHHHHHHHHCCCCCEEECCCCC APDAEPLREFVSGASELKEPALLLSAPKGIAAVTPETTLIHSGKGLYLQSLGEVNISTAQ CCCHHHHHHHHHCHHHHCCCEEEEECCCCCEEECCCCEEEECCCCEEEECCCCEECCCCE RYSVNASKAISILSQQEGIRLVSAKGPLAVESHADTLSLTSMKDVTVQSTQGHLQLTAKN EEECCHHHHHHHHHHCCCEEEEECCCCEEEECCCCEEEECCCCCEEEEECCCEEEEEECC GITLACGGAYIQLTPQGEINVHGPGLLSLKGQHKLQGPTSEDYPLPELPSSVCKECLKKA CEEEEECCEEEEEECCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH QQAAQGFVPREV HHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA