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The map label for this gene is clpV1 [H]

Identifier: 157370031

GI number: 157370031

Start: 1965445

End: 1968099

Strand: Direct

Name: clpV1 [H]

Synonym: Spro_1789

Alternate gene names: 157370031

Gene position: 1965445-1968099 (Clockwise)

Preceding gene: 157370030

Following gene: 157370032

Centisome position: 36.07

GC content: 57.4

Gene sequence:

>2655_bases
ATGGAAAATTCAGCCGCCTTGTTACGTCGCCTTAATCCTTACTGTGCCCGTGCGTTAGAAGGTGCAGCATGCCTGTGTCA
GACCCGCGCCCACGCCGAAATTTTACCCGAACACTGGCTGCTGAAATTGCTGGAGCAGGGCGAAGGTGACCTGACGGTGC
TGGCGCGCCGTTATGAGTGGGATATGGACGCTCTGTGGCAGGATTTACTCGGCTGGCTGGATAACCTGCCGCGTTCCGTG
CGCAGCCGTCCTCAGTTGTCAGGCGCCATTGAATCCTTGTTGAAACAGGCGTGGATGTTTGCCTCGCTTGAAGGCAGCGA
ACACATCCGTAGTGTGCATTTGTTGGCCGCAATGATAGAAATGCCCAAAATGCTGCGCTGTGATGGCGTGTGGCCGCTGC
TGACGCTGGGGCAGAGCCAGCTTGAGCGTCTGCGCCCGTTACTGGACGCACAATCGGACGAGCGTGAGGACGTTCAGCAG
GAAGAAGCGCTGGCACAGACGCACGGTGGAGACGTTGAATTCGTCGGCCGTCCGGTCGGTGCAGAGATAAAAGAAGGTGA
ACTCAATCCTGCGCTCCAGAACGCACTGGATAAGTTCACGCTTGATGTCACCGCTAAAGCGAAAGAGGGCAACATTGACC
CGGTCTTTGGCCGCGATACCGAAATCCGCCAGATGGTGGATATTCTCTCAAGACGTCGCAAGAACAACCCGATACTGGTC
GGCGAACCGGGTGTGGGTAAAACGGCGCTGGTGGAAGGTTTGGCGCTGCGTATCGCTGAAAGTAATGTCCCTGATAGCCT
GAAAACCGTCAGCCTGCGCACTCTCGACCTGGGCCTGCTGCAGGCGGGTGCCGGCGTGAAAGGCGAATTCGAACAGCGCC
TGAAAAACGTCATCGATGCCGTACAGCAGTCGCCGACACCCGTCCTGCTGTTTATCGATGAAGCACACGCCATTATTGGT
GCGGGTAACCAGGCGGGCGGCGCGGATGCGGCTAACCTGCTGAAACCTGCATTAGCAAGGGGGGAATTACGCACTATCGC
CGCCACCACCTGGAGCGAATACAAGCAGTATTTTGAACGCGATGCTGCACTGGAGCGTCGTTTCCAGATGGTCAAAGTCG
ATGAGCCGGACGACGACACCGCCTGCCTGATGCTCAGAGGCCTGAAAGCCCGTTATGCCGAACATCACGGCGTGCATATC
ACTGATGGCGCAGTTAAAGCCGCAGTCACTCTCTCTCGCCGGTACCTGACCGGCCGTCAGTTGCCGGACAAGGCGGTTGA
CTTGCTGGATACCGCGAGTGCCCGCGTGCGCATGAGCCTGGACACTGTACCGGAGCCGCTGACCCGCATCCGGGCGCAAA
TCACCTCGCTTGAAATGGAGAAACAGGCGCTGCTTGAAGATATTGCTGTGGGCAATCAGTCCCACGGTGAGCGCCTGACG
GTGATTGAACAGGAGGAGAACAGCCTCAGCGTGGAACTCAATGAACTGGAAACCCAGTATCGTCGGGAACTCAAACTCAC
CGAACAACTACTGGAAAGCCGCCAGAACATCTCACGTCAGAGTGAAACCTACAGGCTGCAACAAGAGCTGAGCGATATGC
AGCACAGTAACTCGCTGCTCTCAGTGGATGTGGACACTCGCACCGTGGCCAACGTGATTGCCGACTGGACCGGTGTCCCG
CTCTCCTCATTAATGAAGGACGAACAGTCCGAGTTGCTGAGTCTGGAAAGTGCAATCGGCAAGCGGGTGGTAGGCCAGGA
TGTGGCCCTGAACGCTATCGCTCAGCGATTGCGTGCGGCAAAGACAGGCCTTACCTCGGAGAATGGCCCGCAGGGCGTGT
TCCTGCTGGTCGGCCCGAGCGGCACGGGTAAAACCGAAACCGCACTCACGCTGGCCGATGTGCTGTACGGCGGTGAGAAA
TCCCTTATCACCATCAACCTGTCGGAATATCAGGAACCGCACACGGTCAGCCAGCTCAAGGGCTCGCCACCGGGCTACGT
CGGTTACGGTCAGGGTGGCATTCTGACCGAAGCGGTGCGTAAACGCCCGTACAGCGTGGTGTTGCTCGACGAGGTGGAAA
AAGCGCACCGCGACGTAATGAATCTGTTCTATCAGGTGTTTGACCGGGGCTTTATGCGCGACGGCGAAGGCCGTGAAATT
GATTTCCGTAACACCGTGATCCTGATGACGTCCAACCTCGGCAGCGACCCCATCATGCAACTACTGGATGAACAGCCAGA
AGCCACCGAAGGCGATTTGCACGAACTGCTGCGCCCGATATTGCGTGACCACTTCCAGCCCGCGCTGCTGGCCCGTTTCC
AGACCGTGATTTACCGCCCGCTGAGTGAGCCTGCGATGCGCATCATTGTTGAAATGAAACTCGGACAGGTCAGCAAACGC
CTGCACCGTCACTATGGCCTGACCACGCATATTGACGAAAGTCTTTTCGATGCTCTGACCGCCGCCTGCCTGTTGCCGGA
TACCGGCGCACGTAACGTCGACAGCCTGCTCAATCAACAAATTCTACCGGTACTGAGTCAGCAACTGCTGACCCACATGG
CTGCAAAACAGAAACCACAGTCGTTACGCCTTAGCTGGAGTGAGGAAGATGGCATAGGGCTGGAGTTTGACGCTCTGCAA
CCGGACGCTGTGTGA

Upstream 100 bases:

>100_bases
AAACACAATCTGCCCGCCTGACCTTATGCGCTTTAGGTTCCTTTTACAGGAAATAGCGATGGGCGGTAGCGTGCCAGGGA
ACCGATAAAGAGAGAGAATT

Downstream 100 bases:

>100_bases
CCTAACATCAGACAGTTGCAGCGCAACTGCAGTTTATCTGCATTCAGGAAAATCAAAATAATGAAAATGTTCAAAGCTAT
ATTTTTTTCCATGTTGATTA

Product: ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 884; Mature: 884

Protein sequence:

>884_residues
MENSAALLRRLNPYCARALEGAACLCQTRAHAEILPEHWLLKLLEQGEGDLTVLARRYEWDMDALWQDLLGWLDNLPRSV
RSRPQLSGAIESLLKQAWMFASLEGSEHIRSVHLLAAMIEMPKMLRCDGVWPLLTLGQSQLERLRPLLDAQSDEREDVQQ
EEALAQTHGGDVEFVGRPVGAEIKEGELNPALQNALDKFTLDVTAKAKEGNIDPVFGRDTEIRQMVDILSRRRKNNPILV
GEPGVGKTALVEGLALRIAESNVPDSLKTVSLRTLDLGLLQAGAGVKGEFEQRLKNVIDAVQQSPTPVLLFIDEAHAIIG
AGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAALERRFQMVKVDEPDDDTACLMLRGLKARYAEHHGVHI
TDGAVKAAVTLSRRYLTGRQLPDKAVDLLDTASARVRMSLDTVPEPLTRIRAQITSLEMEKQALLEDIAVGNQSHGERLT
VIEQEENSLSVELNELETQYRRELKLTEQLLESRQNISRQSETYRLQQELSDMQHSNSLLSVDVDTRTVANVIADWTGVP
LSSLMKDEQSELLSLESAIGKRVVGQDVALNAIAQRLRAAKTGLTSENGPQGVFLLVGPSGTGKTETALTLADVLYGGEK
SLITINLSEYQEPHTVSQLKGSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGFMRDGEGREI
DFRNTVILMTSNLGSDPIMQLLDEQPEATEGDLHELLRPILRDHFQPALLARFQTVIYRPLSEPAMRIIVEMKLGQVSKR
LHRHYGLTTHIDESLFDALTAACLLPDTGARNVDSLLNQQILPVLSQQLLTHMAAKQKPQSLRLSWSEEDGIGLEFDALQ
PDAV

Sequences:

>Translated_884_residues
MENSAALLRRLNPYCARALEGAACLCQTRAHAEILPEHWLLKLLEQGEGDLTVLARRYEWDMDALWQDLLGWLDNLPRSV
RSRPQLSGAIESLLKQAWMFASLEGSEHIRSVHLLAAMIEMPKMLRCDGVWPLLTLGQSQLERLRPLLDAQSDEREDVQQ
EEALAQTHGGDVEFVGRPVGAEIKEGELNPALQNALDKFTLDVTAKAKEGNIDPVFGRDTEIRQMVDILSRRRKNNPILV
GEPGVGKTALVEGLALRIAESNVPDSLKTVSLRTLDLGLLQAGAGVKGEFEQRLKNVIDAVQQSPTPVLLFIDEAHAIIG
AGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAALERRFQMVKVDEPDDDTACLMLRGLKARYAEHHGVHI
TDGAVKAAVTLSRRYLTGRQLPDKAVDLLDTASARVRMSLDTVPEPLTRIRAQITSLEMEKQALLEDIAVGNQSHGERLT
VIEQEENSLSVELNELETQYRRELKLTEQLLESRQNISRQSETYRLQQELSDMQHSNSLLSVDVDTRTVANVIADWTGVP
LSSLMKDEQSELLSLESAIGKRVVGQDVALNAIAQRLRAAKTGLTSENGPQGVFLLVGPSGTGKTETALTLADVLYGGEK
SLITINLSEYQEPHTVSQLKGSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGFMRDGEGREI
DFRNTVILMTSNLGSDPIMQLLDEQPEATEGDLHELLRPILRDHFQPALLARFQTVIYRPLSEPAMRIIVEMKLGQVSKR
LHRHYGLTTHIDESLFDALTAACLLPDTGARNVDSLLNQQILPVLSQQLLTHMAAKQKPQSLRLSWSEEDGIGLEFDALQ
PDAV
>Mature_884_residues
MENSAALLRRLNPYCARALEGAACLCQTRAHAEILPEHWLLKLLEQGEGDLTVLARRYEWDMDALWQDLLGWLDNLPRSV
RSRPQLSGAIESLLKQAWMFASLEGSEHIRSVHLLAAMIEMPKMLRCDGVWPLLTLGQSQLERLRPLLDAQSDEREDVQQ
EEALAQTHGGDVEFVGRPVGAEIKEGELNPALQNALDKFTLDVTAKAKEGNIDPVFGRDTEIRQMVDILSRRRKNNPILV
GEPGVGKTALVEGLALRIAESNVPDSLKTVSLRTLDLGLLQAGAGVKGEFEQRLKNVIDAVQQSPTPVLLFIDEAHAIIG
AGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAALERRFQMVKVDEPDDDTACLMLRGLKARYAEHHGVHI
TDGAVKAAVTLSRRYLTGRQLPDKAVDLLDTASARVRMSLDTVPEPLTRIRAQITSLEMEKQALLEDIAVGNQSHGERLT
VIEQEENSLSVELNELETQYRRELKLTEQLLESRQNISRQSETYRLQQELSDMQHSNSLLSVDVDTRTVANVIADWTGVP
LSSLMKDEQSELLSLESAIGKRVVGQDVALNAIAQRLRAAKTGLTSENGPQGVFLLVGPSGTGKTETALTLADVLYGGEK
SLITINLSEYQEPHTVSQLKGSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGFMRDGEGREI
DFRNTVILMTSNLGSDPIMQLLDEQPEATEGDLHELLRPILRDHFQPALLARFQTVIYRPLSEPAMRIIVEMKLGQVSKR
LHRHYGLTTHIDESLFDALTAACLLPDTGARNVDSLLNQQILPVLSQQLLTHMAAKQKPQSLRLSWSEEDGIGLEFDALQ
PDAV

Specific function: Required for secretion of hcp1 probably by providing the energy source for its translocation [H]

COG id: COG0542

COG function: function code O; ATPases with chaperone activity, ATP-binding subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the clpA/clpB family [H]

Homologues:

Organism=Homo sapiens, GI13540606, Length=301, Percent_Identity=32.5581395348837, Blast_Score=155, Evalue=2e-37,
Organism=Escherichia coli, GI1788943, Length=689, Percent_Identity=43.2510885341074, Blast_Score=560, Evalue=1e-160,
Organism=Escherichia coli, GI1787109, Length=244, Percent_Identity=46.7213114754098, Blast_Score=239, Evalue=8e-64,
Organism=Saccharomyces cerevisiae, GI6320464, Length=687, Percent_Identity=39.7379912663755, Blast_Score=463, Evalue=1e-131,
Organism=Saccharomyces cerevisiae, GI6323002, Length=694, Percent_Identity=37.0317002881844, Blast_Score=449, Evalue=1e-126,

Paralogues:

None

Copy number: 560 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013093
- InterPro:   IPR003959
- InterPro:   IPR017729
- InterPro:   IPR018368
- InterPro:   IPR001270
- InterPro:   IPR019489
- InterPro:   IPR023150 [H]

Pfam domain/function: PF00004 AAA; PF07724 AAA_2; PF10431 ClpB_D2-small [H]

EC number: NA

Molecular weight: Translated: 98087; Mature: 98087

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS00870 CLPAB_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENSAALLRRLNPYCARALEGAACLCQTRAHAEILPEHWLLKLLEQGEGDLTVLARRYEW
CCCHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEHHHCC
DMDALWQDLLGWLDNLPRSVRSRPQLSGAIESLLKQAWMFASLEGSEHIRSVHLLAAMIE
CHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
MPKMLRCDGVWPLLTLGQSQLERLRPLLDAQSDEREDVQQEEALAQTHGGDVEFVGRPVG
CCHHHHHCCCCHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCC
AEIKEGELNPALQNALDKFTLDVTAKAKEGNIDPVFGRDTEIRQMVDILSRRRKNNPILV
CCCCCCCCCHHHHHHHHHHEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE
GEPGVGKTALVEGLALRIAESNVPDSLKTVSLRTLDLGLLQAGAGVKGEFEQRLKNVIDA
ECCCCCHHHHHHHHHHHHCCCCCCCCHHHEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VQQSPTPVLLFIDEAHAIIGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFER
HHCCCCCEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
DAALERRFQMVKVDEPDDDTACLMLRGLKARYAEHHGVHITDGAVKAAVTLSRRYLTGRQ
HHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHCCCC
LPDKAVDLLDTASARVRMSLDTVPEPLTRIRAQITSLEMEKQALLEDIAVGNQSHGERLT
CCHHHHHHHHCCCHHEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
VIEQEENSLSVELNELETQYRRELKLTEQLLESRQNISRQSETYRLQQELSDMQHSNSLL
EEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
SVDVDTRTVANVIADWTGVPLSSLMKDEQSELLSLESAIGKRVVGQDVALNAIAQRLRAA
EEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
KTGLTSENGPQGVFLLVGPSGTGKTETALTLADVLYGGEKSLITINLSEYQEPHTVSQLK
HCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHCCCCCHHHHHC
GSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGFMRDGEGREI
CCCCCEEECCCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
DFRNTVILMTSNLGSDPIMQLLDEQPEATEGDLHELLRPILRDHFQPALLARFQTVIYRP
ECCCEEEEEECCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
LSEPAMRIIVEMKLGQVSKRLHRHYGLTTHIDESLFDALTAACLLPDTGARNVDSLLNQQ
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ILPVLSQQLLTHMAAKQKPQSLRLSWSEEDGIGLEFDALQPDAV
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCCCCC
>Mature Secondary Structure
MENSAALLRRLNPYCARALEGAACLCQTRAHAEILPEHWLLKLLEQGEGDLTVLARRYEW
CCCHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEHHHCC
DMDALWQDLLGWLDNLPRSVRSRPQLSGAIESLLKQAWMFASLEGSEHIRSVHLLAAMIE
CHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
MPKMLRCDGVWPLLTLGQSQLERLRPLLDAQSDEREDVQQEEALAQTHGGDVEFVGRPVG
CCHHHHHCCCCHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCC
AEIKEGELNPALQNALDKFTLDVTAKAKEGNIDPVFGRDTEIRQMVDILSRRRKNNPILV
CCCCCCCCCHHHHHHHHHHEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE
GEPGVGKTALVEGLALRIAESNVPDSLKTVSLRTLDLGLLQAGAGVKGEFEQRLKNVIDA
ECCCCCHHHHHHHHHHHHCCCCCCCCHHHEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VQQSPTPVLLFIDEAHAIIGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFER
HHCCCCCEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
DAALERRFQMVKVDEPDDDTACLMLRGLKARYAEHHGVHITDGAVKAAVTLSRRYLTGRQ
HHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHCCCC
LPDKAVDLLDTASARVRMSLDTVPEPLTRIRAQITSLEMEKQALLEDIAVGNQSHGERLT
CCHHHHHHHHCCCHHEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
VIEQEENSLSVELNELETQYRRELKLTEQLLESRQNISRQSETYRLQQELSDMQHSNSLL
EEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
SVDVDTRTVANVIADWTGVPLSSLMKDEQSELLSLESAIGKRVVGQDVALNAIAQRLRAA
EEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
KTGLTSENGPQGVFLLVGPSGTGKTETALTLADVLYGGEKSLITINLSEYQEPHTVSQLK
HCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEHHHCCCCCHHHHHC
GSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGFMRDGEGREI
CCCCCEEECCCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
DFRNTVILMTSNLGSDPIMQLLDEQPEATEGDLHELLRPILRDHFQPALLARFQTVIYRP
ECCCEEEEEECCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
LSEPAMRIIVEMKLGQVSKRLHRHYGLTTHIDESLFDALTAACLLPDTGARNVDSLLNQQ
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ILPVLSQQLLTHMAAKQKPQSLRLSWSEEDGIGLEFDALQPDAV
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]