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The map label for this gene is ynfH [H]

Identifier: 157369932

GI number: 157369932

Start: 1852307

End: 1853167

Strand: Direct

Name: ynfH [H]

Synonym: Spro_1689

Alternate gene names: 157369932

Gene position: 1852307-1853167 (Clockwise)

Preceding gene: 157369931

Following gene: 157369933

Centisome position: 33.99

GC content: 55.75

Gene sequence:

>861_bases
ATGGGCATGGGATGGCATGAATGGCCGCTGATGCTGTTTACCGTATTGGGGCAATCAGTGGTGGGAGCGACCTTGGTCAT
GGCGGGGGCGGTGATCGGTGGCAATCTGAACGAACAGCAGGGCCGGGCAGTTCATCGCTCAATGTTCTGTTTGTGGTTGC
TGATGGGCATCGCTTTTGTCGCTTCTACGCTGCACCTGGGGTCACCGTTACGCGCGTTCAACTCGTTAAACCGCATTGGC
GCTTCGGCGTTGAGCAACGAAATTGCCAGTGGCGCGTTGTTCTTTGCCGTCGGTGGTTTTTATTGGCTGCTGGCGATACT
GGGCAGAATGCCACCGGCGTTGGGTAAAGTGTGGCTGTGGGTGACCATGGCGCTGGGCGTGGTCTTTGTTTACGCCATGA
CGCGGGTGTATCAAATCGATACTGTGCCAACCTGGCATAACGGTTACACTACGCTGAACTTTTTCCTGACGACGCTGATC
TGCGGGCCGTTGCTGGGCGTTTTATTGCTGCGTGCGGCTGGATTAGCGGTATCAGCCCGCTATTCACTGGCTATTCTTAG
CGTGGTGGCACTGTTGGCAAGCCTGTGTGCAGTGATGATGCAAGGCTATGAGTTGGCCAGTATCAATAGCTCGGTACAGC
AGGCCTCCACGCTGATCCCGCAATATGGCCAGTTAATGGTTGGGCGGCTGGTGTTGGTGGTGTCAGGTTTAGGCTGTTGG
ATTTGCCCACTGTTGCGCCGGGGTAACGCGAGCGTGATGGGGATGGTTTTAGGTTTGATTTTGGTTATCGCCGGTGAGTT
GGTAGGCCGTGGTGTGTTCTACGGCCTGCATATGACCGTTGGCATGGCGGTAGCCGGTTAA

Upstream 100 bases:

>100_bases
GCGCATTTTACCCGGCCGAGCATAGTGCTGAAACCCAATGCCAATAGCCGGCCATGTGGCGATACCACGGGCTATTTGGC
CAATCCGAAGGAGGTTTAAT

Downstream 100 bases:

>100_bases
TATTGTAGTCAGGCACAGTTCGCTGTGCCCTTAATAGGATCCTTGATTTATGACGCTTGAAAATATCGCTTTAACGGGCC
GGGTGCTGGGTGTGTTGTTG

Product: DMSO reductase anchor subunit DmsC

Products: NA

Alternate protein names: DMSO reductase anchor subunit ynfH [H]

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MGMGWHEWPLMLFTVLGQSVVGATLVMAGAVIGGNLNEQQGRAVHRSMFCLWLLMGIAFVASTLHLGSPLRAFNSLNRIG
ASALSNEIASGALFFAVGGFYWLLAILGRMPPALGKVWLWVTMALGVVFVYAMTRVYQIDTVPTWHNGYTTLNFFLTTLI
CGPLLGVLLLRAAGLAVSARYSLAILSVVALLASLCAVMMQGYELASINSSVQQASTLIPQYGQLMVGRLVLVVSGLGCW
ICPLLRRGNASVMGMVLGLILVIAGELVGRGVFYGLHMTVGMAVAG

Sequences:

>Translated_286_residues
MGMGWHEWPLMLFTVLGQSVVGATLVMAGAVIGGNLNEQQGRAVHRSMFCLWLLMGIAFVASTLHLGSPLRAFNSLNRIG
ASALSNEIASGALFFAVGGFYWLLAILGRMPPALGKVWLWVTMALGVVFVYAMTRVYQIDTVPTWHNGYTTLNFFLTTLI
CGPLLGVLLLRAAGLAVSARYSLAILSVVALLASLCAVMMQGYELASINSSVQQASTLIPQYGQLMVGRLVLVVSGLGCW
ICPLLRRGNASVMGMVLGLILVIAGELVGRGVFYGLHMTVGMAVAG
>Mature_285_residues
GMGWHEWPLMLFTVLGQSVVGATLVMAGAVIGGNLNEQQGRAVHRSMFCLWLLMGIAFVASTLHLGSPLRAFNSLNRIGA
SALSNEIASGALFFAVGGFYWLLAILGRMPPALGKVWLWVTMALGVVFVYAMTRVYQIDTVPTWHNGYTTLNFFLTTLIC
GPLLGVLLLRAAGLAVSARYSLAILSVVALLASLCAVMMQGYELASINSSVQQASTLIPQYGQLMVGRLVLVVSGLGCWI
CPLLRRGNASVMGMVLGLILVIAGELVGRGVFYGLHMTVGMAVAG

Specific function: Terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds. The C subunit anchors the other two subunits to the membrane and stabilize the catalytic subunits [H]

COG id: COG3302

COG function: function code R; DMSO reductase anchor subunit

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli dmsC [H]

Homologues:

Organism=Escherichia coli, GI1787873, Length=286, Percent_Identity=61.8881118881119, Blast_Score=320, Evalue=5e-89,
Organism=Escherichia coli, GI1787123, Length=286, Percent_Identity=58.7412587412587, Blast_Score=288, Evalue=4e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007059 [H]

Pfam domain/function: PF04976 DmsC [H]

EC number: NA

Molecular weight: Translated: 30426; Mature: 30295

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GMGWHEWPLMLFTVLGQSVVGATLVMAGAVIGGNLNEQQGRAVHRSMFCLWLLMGIAFV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ASTLHLGSPLRAFNSLNRIGASALSNEIASGALFFAVGGFYWLLAILGRMPPALGKVWLW
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VTMALGVVFVYAMTRVYQIDTVPTWHNGYTTLNFFLTTLICGPLLGVLLLRAAGLAVSAR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
YSLAILSVVALLASLCAVMMQGYELASINSSVQQASTLIPQYGQLMVGRLVLVVSGLGCW
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ICPLLRRGNASVMGMVLGLILVIAGELVGRGVFYGLHMTVGMAVAG
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]