| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is pcbC [H]
Identifier: 157369868
GI number: 157369868
Start: 1779598
End: 1780617
Strand: Direct
Name: pcbC [H]
Synonym: Spro_1625
Alternate gene names: 157369868
Gene position: 1779598-1780617 (Clockwise)
Preceding gene: 157369863
Following gene: 157369871
Centisome position: 32.66
GC content: 61.08
Gene sequence:
>1020_bases ATGACGCCACCACTGACGTTGAAGACGCTGCCGCAACTGAGTCTTTCGCAGCTTGACGGCGACCGGCGACAGCGGCAGGC ATTTCTTGACGGGTTGCGTGAGGCCGCCCGTGACGTAGGTTTTTTCTATCTGCGCGGACACGGCGTGGATAACAGGTTGA ATGCTCAACTGCAGCAGCATGCCCGGCAGTTTTTTGCGCTGCCGGAAGCCGACAAACTGGCGGTGCAGATGGTGCATTCG CCGCATTTCCGCGGTTATAACCGAGCGGCGGCCGAACTGACGCGCGGACAGCCGGACTGGCGCGAACAGTTCGATATCGG CGCGGAGCGTCCTGCGTTGCAACTGGCCAATGAGACTCCGCGATGGGCGCGTTTACAGGGGCCGAATCAATGGCCTGAGG CGCTACCCGCACTCAAACCGCTGCTGTTGCAGTGGCAGCAGGCGATGACCGCCATGTCGCTGCGACTGTTGCGCGCCTTC GCGCTGGCGCTTTCGTTGCCGGAGCAGGCATTTGACTCGCTCTACGGCGATAAACCCAATGAACATATCAAACTGATCCG TTACCCGGGGCGGGATGCTACCGACAGCGGGCAAGGGGTGGGCGCCCATAAAGACTCCGGTTTTCTCAGTTTTTTGCTGC AGGACCGGCAGAAAGGCCTGCAGGTTGAAGTTGACGAAGGGCGCTGGGTTGACGCCGAACCGCTTGAAGACAGTTTTGTA GTCAACATCGGTGAACTGCTGGAGTTGGCAACCAACGGCTATCTGCGTGCCACGGTGCACCGGGTAGAGACGCCGCCGGC GGGCAGCGAGCGCCTGTCGATTGCCTTCTTCCTCGGGGCACGGCTGGACGCCGTGGTGCCGCTGTATCAGCTCCCTGCGC ATCTGGCGGCCGAGGCGCGTGGTCCAGCCAGCGATCCGCATAATCCGCTGTTGCGTGACGTGGGCTTTAACTACCTGAAA GGACGCATTCGCTCACATCCCGACGTGGCGCAGCGCTATTATCAGGACGTTGTCGCCTAA
Upstream 100 bases:
>100_bases AACTATAGGGCTAATGCACTGGCCATCCAGGAGTTAACGATGCTGATCATTCGCCTTTATAGCGGTCCGGTTTTTGTCGG AGATGAAGAGGAACAGGATA
Downstream 100 bases:
>100_bases TGGAAGGGGGCGCCGCATGCAGCGCCCAATGGGTTAAATCGGGTCGAACATGTTCGACCCCTACGGTTTTACATCAGGGC TGCGATTACTCCGCCAGCGC
Product: 2OG-Fe(II) oxygenase
Products: NA
Alternate protein names: IPNS [H]
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MTPPLTLKTLPQLSLSQLDGDRRQRQAFLDGLREAARDVGFFYLRGHGVDNRLNAQLQQHARQFFALPEADKLAVQMVHS PHFRGYNRAAAELTRGQPDWREQFDIGAERPALQLANETPRWARLQGPNQWPEALPALKPLLLQWQQAMTAMSLRLLRAF ALALSLPEQAFDSLYGDKPNEHIKLIRYPGRDATDSGQGVGAHKDSGFLSFLLQDRQKGLQVEVDEGRWVDAEPLEDSFV VNIGELLELATNGYLRATVHRVETPPAGSERLSIAFFLGARLDAVVPLYQLPAHLAAEARGPASDPHNPLLRDVGFNYLK GRIRSHPDVAQRYYQDVVA
Sequences:
>Translated_339_residues MTPPLTLKTLPQLSLSQLDGDRRQRQAFLDGLREAARDVGFFYLRGHGVDNRLNAQLQQHARQFFALPEADKLAVQMVHS PHFRGYNRAAAELTRGQPDWREQFDIGAERPALQLANETPRWARLQGPNQWPEALPALKPLLLQWQQAMTAMSLRLLRAF ALALSLPEQAFDSLYGDKPNEHIKLIRYPGRDATDSGQGVGAHKDSGFLSFLLQDRQKGLQVEVDEGRWVDAEPLEDSFV VNIGELLELATNGYLRATVHRVETPPAGSERLSIAFFLGARLDAVVPLYQLPAHLAAEARGPASDPHNPLLRDVGFNYLK GRIRSHPDVAQRYYQDVVA >Mature_338_residues TPPLTLKTLPQLSLSQLDGDRRQRQAFLDGLREAARDVGFFYLRGHGVDNRLNAQLQQHARQFFALPEADKLAVQMVHSP HFRGYNRAAAELTRGQPDWREQFDIGAERPALQLANETPRWARLQGPNQWPEALPALKPLLLQWQQAMTAMSLRLLRAFA LALSLPEQAFDSLYGDKPNEHIKLIRYPGRDATDSGQGVGAHKDSGFLSFLLQDRQKGLQVEVDEGRWVDAEPLEDSFVV NIGELLELATNGYLRATVHRVETPPAGSERLSIAFFLGARLDAVVPLYQLPAHLAAEARGPASDPHNPLLRDVGFNYLKG RIRSHPDVAQRYYQDVVA
Specific function: Removes, in the presence of oxygen, 4 hydrogen atoms from delta-L-(alpha-aminoadipyl)-L-cysteinyl-D-valine (ACV) to form the azetidinone and thiazolidine rings of isopenicillin [H]
COG id: COG3491
COG function: function code R; Isopenicillin N synthase and related dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe2OG dioxygenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002057 - InterPro: IPR002283 - InterPro: IPR005123 [H]
Pfam domain/function: PF03171 2OG-FeII_Oxy [H]
EC number: =1.21.3.1 [H]
Molecular weight: Translated: 38031; Mature: 37899
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPLTLKTLPQLSLSQLDGDRRQRQAFLDGLREAARDVGFFYLRGHGVDNRLNAQLQQH CCCCCCHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHH ARQFFALPEADKLAVQMVHSPHFRGYNRAAAELTRGQPDWREQFDIGAERPALQLANETP HHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCHHHHCCCCC RWARLQGPNQWPEALPALKPLLLQWQQAMTAMSLRLLRAFALALSLPEQAFDSLYGDKPN CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC EHIKLIRYPGRDATDSGQGVGAHKDSGFLSFLLQDRQKGLQVEVDEGRWVDAEPLEDSFV CCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHH VNIGELLELATNGYLRATVHRVETPPAGSERLSIAFFLGARLDAVVPLYQLPAHLAAEAR CCHHHHHHHHHCCEEEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCC GPASDPHNPLLRDVGFNYLKGRIRSHPDVAQRYYQDVVA CCCCCCCCHHHHHHCHHHHHHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure TPPLTLKTLPQLSLSQLDGDRRQRQAFLDGLREAARDVGFFYLRGHGVDNRLNAQLQQH CCCCCHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHH ARQFFALPEADKLAVQMVHSPHFRGYNRAAAELTRGQPDWREQFDIGAERPALQLANETP HHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCHHHHCCCCC RWARLQGPNQWPEALPALKPLLLQWQQAMTAMSLRLLRAFALALSLPEQAFDSLYGDKPN CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC EHIKLIRYPGRDATDSGQGVGAHKDSGFLSFLLQDRQKGLQVEVDEGRWVDAEPLEDSFV CCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHH VNIGELLELATNGYLRATVHRVETPPAGSERLSIAFFLGARLDAVVPLYQLPAHLAAEAR CCHHHHHHHHHCCEEEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCC GPASDPHNPLLRDVGFNYLKGRIRSHPDVAQRYYQDVVA CCCCCCCCHHHHHHCHHHHHHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3130293 [H]