| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is prtE [H]
Identifier: 157369840
GI number: 157369840
Start: 1748151
End: 1749482
Strand: Direct
Name: prtE [H]
Synonym: Spro_1597
Alternate gene names: 157369840
Gene position: 1748151-1749482 (Clockwise)
Preceding gene: 157369839
Following gene: 157369841
Centisome position: 32.08
GC content: 53.0
Gene sequence:
>1332_bases ATGTCTACGCACATTGGCGAGCCGCAAGACTCGTATTCAGAACAGATCCCACAGGATGAGCGGCGTTTTACCCGCATGGG GTGGTTAGTGGTTGGGATTGGCCTGTTTGGCTTCTTCGCCTGGGCTGCGTTTGCACCTTTGGATAAAGGGGTCGCGTCAC CAGGTTCGGTGACCGTTTCCGGCAATCGTAAAACCGTACAGGCCCCGGCCAGCGGCATCATCAAAAGTATCACGGTAAAA GAAGGCGACAAGGTTAAAGCGGGCGAGGTGCTGGTGCAGTTGAGCCAGGTTCAGGCCCAGGCACAGGTTGACTCGCTTCG TGACCAATATTACACCACGCTTGCCAGCGAAGGGCGTTTGCTGGCTGAACGTGATGGATTAAGCAAAGTCACTTTTTCTC CTGTTTTTGAAACCATCCAGGCTCAGCCGCGGGTCGCTGAGATCATCGCATTGCAAACGCAGTTATTCTCTTCCCGTCGC ATAGGGCTACAAAGCGAAGTTGACGGCTATAAACAGTCAATGGACGGCATGCGTTTCCAACTGAAGGGCCTGCAGGACTC AAGGGTCAACAAGCAAATCCAGCTTTCCAGCCTGCGCGAACAGATGAACAGCATGAAGCAACTGGCGGCGGACGGTTATT TACCGCGTAACCGTTATCTGGAGGTACAGCGTCAGTTTGCGGAAGTGAACAGCAGTATCGATGAAACCGTTGGGCGAATT GGCCAGGTACAAAAACAGTTGCAGGAGTCTCAGCAGCGGATCGACCAACGCTTTGCCGACTATCAACGCGAAGTCAGAAC TCAGTTGGCGCAAACGCAGATGGATGCCAGCGAGTTTAGAAACAAGCTGGAAATGGCGAATTTTGACCTCGGCAACACCG CTATCAGTTCGCCGGTGGATGGGACTGTCGTTGGGTTAAATATCTTTACTCAGGGGGGCGTCGTGGGAGCGGGTGACCAC CTGATGGACGTTGTACCCAGCCAGGCTACATTGGTGGTGGATTCACGCCTCAAGGTAGAGCTGATTGATAAAGTGTACAA CGGGTTGCCGGTGGATTTGATGTTTACCGCCTTCAACCAAAACAAGACCCCGAAAATACCGGGGACGGTGACGTTGGTTT CTGCCGACCGTCTGGTCGACAAGGCCAATGGCGAACCCTACTACCAAATGCAGGTCACGGTTTCCCCCGAGGGCATGAAA TTGCTCAGTGGCGAAGACATCAAACCGGGGATGCCTGTGGAGGTGTTTGTGAAGACCGGCTCGCGCTCACTGTTGAGTTA TCTGTTTAAACCTATTTTGGATCGCGCTCATACTTCATTAACCGAGGAATAA
Upstream 100 bases:
>100_bases CTCCGAGCCGGACGAAGGCAATATTCCAAAAACTCAAATTAATTAAGCTGTGTACTTGCCGGGCGGCGCCAAAATGCCGC CTGCAGTCAAAGGAGTTGGT
Downstream 100 bases:
>100_bases TTTTGATTCAATTTAAACGACAGGTTGCTGGCCTTGCTATCAGTACCCTCTTGTTTGCGATAGCTGCGCCGGTTCATTCG ATAGGGATTATAGACGCATA
Product: HlyD family type I secretion membrane fusion protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 443; Mature: 442
Protein sequence:
>443_residues MSTHIGEPQDSYSEQIPQDERRFTRMGWLVVGIGLFGFFAWAAFAPLDKGVASPGSVTVSGNRKTVQAPASGIIKSITVK EGDKVKAGEVLVQLSQVQAQAQVDSLRDQYYTTLASEGRLLAERDGLSKVTFSPVFETIQAQPRVAEIIALQTQLFSSRR IGLQSEVDGYKQSMDGMRFQLKGLQDSRVNKQIQLSSLREQMNSMKQLAADGYLPRNRYLEVQRQFAEVNSSIDETVGRI GQVQKQLQESQQRIDQRFADYQREVRTQLAQTQMDASEFRNKLEMANFDLGNTAISSPVDGTVVGLNIFTQGGVVGAGDH LMDVVPSQATLVVDSRLKVELIDKVYNGLPVDLMFTAFNQNKTPKIPGTVTLVSADRLVDKANGEPYYQMQVTVSPEGMK LLSGEDIKPGMPVEVFVKTGSRSLLSYLFKPILDRAHTSLTEE
Sequences:
>Translated_443_residues MSTHIGEPQDSYSEQIPQDERRFTRMGWLVVGIGLFGFFAWAAFAPLDKGVASPGSVTVSGNRKTVQAPASGIIKSITVK EGDKVKAGEVLVQLSQVQAQAQVDSLRDQYYTTLASEGRLLAERDGLSKVTFSPVFETIQAQPRVAEIIALQTQLFSSRR IGLQSEVDGYKQSMDGMRFQLKGLQDSRVNKQIQLSSLREQMNSMKQLAADGYLPRNRYLEVQRQFAEVNSSIDETVGRI GQVQKQLQESQQRIDQRFADYQREVRTQLAQTQMDASEFRNKLEMANFDLGNTAISSPVDGTVVGLNIFTQGGVVGAGDH LMDVVPSQATLVVDSRLKVELIDKVYNGLPVDLMFTAFNQNKTPKIPGTVTLVSADRLVDKANGEPYYQMQVTVSPEGMK LLSGEDIKPGMPVEVFVKTGSRSLLSYLFKPILDRAHTSLTEE >Mature_442_residues STHIGEPQDSYSEQIPQDERRFTRMGWLVVGIGLFGFFAWAAFAPLDKGVASPGSVTVSGNRKTVQAPASGIIKSITVKE GDKVKAGEVLVQLSQVQAQAQVDSLRDQYYTTLASEGRLLAERDGLSKVTFSPVFETIQAQPRVAEIIALQTQLFSSRRI GLQSEVDGYKQSMDGMRFQLKGLQDSRVNKQIQLSSLREQMNSMKQLAADGYLPRNRYLEVQRQFAEVNSSIDETVGRIG QVQKQLQESQQRIDQRFADYQREVRTQLAQTQMDASEFRNKLEMANFDLGNTAISSPVDGTVVGLNIFTQGGVVGAGDHL MDVVPSQATLVVDSRLKVELIDKVYNGLPVDLMFTAFNQNKTPKIPGTVTLVSADRLVDKANGEPYYQMQVTVSPEGMKL LSGEDIKPGMPVEVFVKTGSRSLLSYLFKPILDRAHTSLTEE
Specific function: Involved in the secretion of proteases A, B, C and G [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003997 - InterPro: IPR006143 - InterPro: IPR006144 - InterPro: IPR010129 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 49026; Mature: 48895
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: PS00543 HLYD_FAMILY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTHIGEPQDSYSEQIPQDERRFTRMGWLVVGIGLFGFFAWAAFAPLDKGVASPGSVTVS CCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEC GNRKTVQAPASGIIKSITVKEGDKVKAGEVLVQLSQVQAQAQVDSLRDQYYTTLASEGRL CCCEEEECCHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE LAERDGLSKVTFSPVFETIQAQPRVAEIIALQTQLFSSRRIGLQSEVDGYKQSMDGMRFQ EECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEE LKGLQDSRVNKQIQLSSLREQMNSMKQLAADGYLPRNRYLEVQRQFAEVNSSIDETVGRI ECCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH GQVQKQLQESQQRIDQRFADYQREVRTQLAQTQMDASEFRNKLEMANFDLGNTAISSPVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCC GTVVGLNIFTQGGVVGAGDHLMDVVPSQATLVVDSRLKVELIDKVYNGLPVDLMFTAFNQ CEEEEEEEEECCCEECCCCHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEEEECC NKTPKIPGTVTLVSADRLVDKANGEPYYQMQVTVSPEGMKLLSGEDIKPGMPVEVFVKTG CCCCCCCCEEEEEEHHHHHHHCCCCCEEEEEEEECCCCCEECCCCCCCCCCCEEEEEECC SRSLLSYLFKPILDRAHTSLTEE CHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure STHIGEPQDSYSEQIPQDERRFTRMGWLVVGIGLFGFFAWAAFAPLDKGVASPGSVTVS CCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEC GNRKTVQAPASGIIKSITVKEGDKVKAGEVLVQLSQVQAQAQVDSLRDQYYTTLASEGRL CCCEEEECCHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE LAERDGLSKVTFSPVFETIQAQPRVAEIIALQTQLFSSRRIGLQSEVDGYKQSMDGMRFQ EECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEE LKGLQDSRVNKQIQLSSLREQMNSMKQLAADGYLPRNRYLEVQRQFAEVNSSIDETVGRI ECCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH GQVQKQLQESQQRIDQRFADYQREVRTQLAQTQMDASEFRNKLEMANFDLGNTAISSPVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCC GTVVGLNIFTQGGVVGAGDHLMDVVPSQATLVVDSRLKVELIDKVYNGLPVDLMFTAFNQ CEEEEEEEEECCCEECCCCHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEEEECC NKTPKIPGTVTLVSADRLVDKANGEPYYQMQVTVSPEGMKLLSGEDIKPGMPVEVFVKTG CCCCCCCCEEEEEEHHHHHHHCCCCCEEEEEEEECCCCCEECCCCCCCCCCCEEEEEECC SRSLLSYLFKPILDRAHTSLTEE CHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2184029 [H]