| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is galF [H]
Identifier: 157369825
GI number: 157369825
Start: 1726386
End: 1727279
Strand: Direct
Name: galF [H]
Synonym: Spro_1582
Alternate gene names: 157369825
Gene position: 1726386-1727279 (Clockwise)
Preceding gene: 157369824
Following gene: 157369826
Centisome position: 31.68
GC content: 49.78
Gene sequence:
>894_bases ATGACCAAGTTAAAAGCTGTCATTCCCGTTGCAGGTCTGGGTATGCGTATGCTGCCGGCAACCAAGGCTATTCCAAAGGA AATGCTACCGATCGTTGATAAGCCGTTGATTCAATATATAGTTAATGAATGTGTTGCTGCCGGGATCAAAGAGATTATCC TGGTGACGCATTCATCCAAGAACGCGATCGAAAACCATTTTGATACCTCCTTTGAGCTGGAAGCGATGCTCGAAGCGCGC GTTAAGCGCCAGTTGCTTGATGAAGTGCAGTCGATTACGCCAAAAGGCGTAACGCTAATGCATATTCGTCAGGGGCAGCC AAAAGGCTTGGGGCATGCGGTGCTTTGCGCCAAGCCGCTGGTAGGGGACTCACCTTTTGTAGTTCTGTTGCCGGATGTCT TGCTTGACGACGCCAAAGCCGACCTGAAGAAAGACAACCTGCCGCATATGATTAGTCGCTTTGAACAGACGGGTTTGAGC CAGGTGCTGGTTCAGGCTGCGGATGAGCATGTTTTACACGACTACTCGGTGGTTGAGTGTGAAGCCAACAAGCTGCAGCC TGGTGAAAGCTCGCGTATGACATCGATTATCGAAAAGCCAGGCCGTGAAGTTCAGTTGAAATCCAATTATTCTGCAGTAG GGCGCTATGTTTTGTCAGCGGATATTTGGCCACTATTAGAGAAAACAGAGCCAGGCGCTTGGGGGCGAATTCAGCTTACA GACGCCATTGCTGAACTGTTGAAACACCAACCGGTCGAGGCGACAGAACTTGTGGGAGAATCGTTCAATTGTGGCGAAAA AATGGGGTATCTGCGGGCATTTGTTACCTATGGTTTGCGCCATCCTACTCAGGGTAAGGCGTTTCGAGAGTGGGCTGACC AACTCTCATTGTAA
Upstream 100 bases:
>100_bases CTCCGAAGGCAAAGATTTTACCCAGTGGCTAAAACAAACGCTGAACAGCAAGTAAGAGTTACGGCTGAGAAGACGATCAT AAGATATCAAGAGGATTACC
Downstream 100 bases:
>100_bases CGCTAATCACGAAAATTCTATGGCTACCTCAGAGCAATTCTGACGTGGCCTTTTACTATGCTGAATCGAAATGCGCCTAG TTAGGCACACTTTTTTTTTG
Product: UTP-glucose-1-phosphate uridylyltransferase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MTKLKAVIPVAGLGMRMLPATKAIPKEMLPIVDKPLIQYIVNECVAAGIKEIILVTHSSKNAIENHFDTSFELEAMLEAR VKRQLLDEVQSITPKGVTLMHIRQGQPKGLGHAVLCAKPLVGDSPFVVLLPDVLLDDAKADLKKDNLPHMISRFEQTGLS QVLVQAADEHVLHDYSVVECEANKLQPGESSRMTSIIEKPGREVQLKSNYSAVGRYVLSADIWPLLEKTEPGAWGRIQLT DAIAELLKHQPVEATELVGESFNCGEKMGYLRAFVTYGLRHPTQGKAFREWADQLSL
Sequences:
>Translated_297_residues MTKLKAVIPVAGLGMRMLPATKAIPKEMLPIVDKPLIQYIVNECVAAGIKEIILVTHSSKNAIENHFDTSFELEAMLEAR VKRQLLDEVQSITPKGVTLMHIRQGQPKGLGHAVLCAKPLVGDSPFVVLLPDVLLDDAKADLKKDNLPHMISRFEQTGLS QVLVQAADEHVLHDYSVVECEANKLQPGESSRMTSIIEKPGREVQLKSNYSAVGRYVLSADIWPLLEKTEPGAWGRIQLT DAIAELLKHQPVEATELVGESFNCGEKMGYLRAFVTYGLRHPTQGKAFREWADQLSL >Mature_296_residues TKLKAVIPVAGLGMRMLPATKAIPKEMLPIVDKPLIQYIVNECVAAGIKEIILVTHSSKNAIENHFDTSFELEAMLEARV KRQLLDEVQSITPKGVTLMHIRQGQPKGLGHAVLCAKPLVGDSPFVVLLPDVLLDDAKADLKKDNLPHMISRFEQTGLSQ VLVQAADEHVLHDYSVVECEANKLQPGESSRMTSIIEKPGREVQLKSNYSAVGRYVLSADIWPLLEKTEPGAWGRIQLTD AIAELLKHQPVEATELVGESFNCGEKMGYLRAFVTYGLRHPTQGKAFREWADQLSL
Specific function: Lipopolysaccharide biosynthesis. [C]
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788355, Length=295, Percent_Identity=64.7457627118644, Blast_Score=393, Evalue=1e-111, Organism=Escherichia coli, GI1787488, Length=290, Percent_Identity=64.4827586206897, Blast_Score=384, Evalue=1e-108, Organism=Escherichia coli, GI1788351, Length=243, Percent_Identity=25.9259259259259, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1790224, Length=259, Percent_Identity=25.4826254826255, Blast_Score=72, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005774 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 32849; Mature: 32717
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLKAVIPVAGLGMRMLPATKAIPKEMLPIVDKPLIQYIVNECVAAGIKEIILVTHSSK CCCCHHHCCHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC NAIENHFDTSFELEAMLEARVKRQLLDEVQSITPKGVTLMHIRQGQPKGLGHAVLCAKPL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEECCC VGDSPFVVLLPDVLLDDAKADLKKDNLPHMISRFEQTGLSQVLVQAADEHVLHDYSVVEC CCCCCEEEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE EANKLQPGESSRMTSIIEKPGREVQLKSNYSAVGRYVLSADIWPLLEKTEPGAWGRIQLT ECCCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHH DAIAELLKHQPVEATELVGESFNCGEKMGYLRAFVTYGLRHPTQGKAFREWADQLSL HHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure TKLKAVIPVAGLGMRMLPATKAIPKEMLPIVDKPLIQYIVNECVAAGIKEIILVTHSSK CCCHHHCCHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC NAIENHFDTSFELEAMLEARVKRQLLDEVQSITPKGVTLMHIRQGQPKGLGHAVLCAKPL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEECCC VGDSPFVVLLPDVLLDDAKADLKKDNLPHMISRFEQTGLSQVLVQAADEHVLHDYSVVEC CCCCCEEEEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE EANKLQPGESSRMTSIIEKPGREVQLKSNYSAVGRYVLSADIWPLLEKTEPGAWGRIQLT ECCCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHH DAIAELLKHQPVEATELVGESFNCGEKMGYLRAFVTYGLRHPTQGKAFREWADQLSL HHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]