| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is iaaA [H]
Identifier: 157369792
GI number: 157369792
Start: 1687842
End: 1688789
Strand: Direct
Name: iaaA [H]
Synonym: Spro_1549
Alternate gene names: 157369792
Gene position: 1687842-1688789 (Clockwise)
Preceding gene: 157369791
Following gene: 157369793
Centisome position: 30.98
GC content: 60.97
Gene sequence:
>948_bases ATGAGCAAACCAGTGATTGCCATTCATGGCGGCGCGGGCGCAATTACCCGCTCGGCGCTGAGTGCGGAAAAGGAACAGGA GTATATCCAGGCGTTATCCGGCATTGTTGCCGCAGGTCAGCAGATCCTGGCCCAGGGCGGCAACGCATTGGATGCGGTGA CCGAAGCCGTGCGCTTGCTGGAAGAGTGCCCGTTATTTAATGCCGGCAAAGGCTCGGTGTTTACTCATCAGGGTACCCAT GAGCTGGACGCCTGCGTGATGGACGGGCGCACCTGCGATGCCGGCGCGGTGGCGGGCGTCAGCCGGATACGCAACCCGAT ACTGGCCGCACGCGCGGTGCTGGAAAACAGCCAGCATGTGTTGTTTGCCGGTGAGGGCGCTGAAAAGTTTGCCGCGGCCC ACGGTCTTGAAATGGTTACCCCCGATTTCTTCTTTACCCAACAACGTTTTGACCAGTTGCACCGCGCTCAGGCGGAGCAG GGCCGAGTATTGCTCGATCACGATGGCGCTGAGCCGATCGATCCCGACAGGAAGTTCGGTACCGTCGGTGCGGTGGCGCT GGATGCTTTGGGCAATTTGGCGGCGGCGACATCGACCGGTGGCATGACCAACAAACAGGCCGGTCGGGTGGGCGATACCC CGATCATCGGCGCCGGCTGTTATGCCAACAATGCCACCGTGGCGGTGTCCAGCACCGGTACCGGCGAAATATTCATGCGT GGCGTATCGGCCTATGACGTTTCCGCGCTGATGGAATACGCCGGCCTCAGCCTGCAGCAGGCCAGCGACCGGGTGGTAAT GGAAAAACTGCTGGCGATGGGCGGTAGCGGCGGCATGATTGCCATCGACAGCCAGGGCAACGTGGCGCTGCCGTTTAACA GCGAGGGGATGTACCGCGGTTTTGGTTATGTCGGCGATGCGCCGTCCGTAGGGATTTATACCCTATAG
Upstream 100 bases:
>100_bases ATGCTTTACATAGAATGCAGGGCTAAATATAGTCGGGAAAAGAAAAAATAATTAATTATCAGCCCGGAAGGGTACGGGAT TAACACAGGGTGTCAGGCAT
Downstream 100 bases:
>100_bases CTTTCAAGTTGCCGCGAGCGCAGATAACAACGCTGCAACTTGAAATATGACGGGTATATCGCTAACCGTTCACCAGGAGG GTACATGACCGATGCCTTAA
Product: peptidase T2 asparaginase 2
Products: NA
Alternate protein names: Beta-aspartyl-peptidase; EcAIII; Isoaspartyl dipeptidase [H]
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MSKPVIAIHGGAGAITRSALSAEKEQEYIQALSGIVAAGQQILAQGGNALDAVTEAVRLLEECPLFNAGKGSVFTHQGTH ELDACVMDGRTCDAGAVAGVSRIRNPILAARAVLENSQHVLFAGEGAEKFAAAHGLEMVTPDFFFTQQRFDQLHRAQAEQ GRVLLDHDGAEPIDPDRKFGTVGAVALDALGNLAAATSTGGMTNKQAGRVGDTPIIGAGCYANNATVAVSSTGTGEIFMR GVSAYDVSALMEYAGLSLQQASDRVVMEKLLAMGGSGGMIAIDSQGNVALPFNSEGMYRGFGYVGDAPSVGIYTL
Sequences:
>Translated_315_residues MSKPVIAIHGGAGAITRSALSAEKEQEYIQALSGIVAAGQQILAQGGNALDAVTEAVRLLEECPLFNAGKGSVFTHQGTH ELDACVMDGRTCDAGAVAGVSRIRNPILAARAVLENSQHVLFAGEGAEKFAAAHGLEMVTPDFFFTQQRFDQLHRAQAEQ GRVLLDHDGAEPIDPDRKFGTVGAVALDALGNLAAATSTGGMTNKQAGRVGDTPIIGAGCYANNATVAVSSTGTGEIFMR GVSAYDVSALMEYAGLSLQQASDRVVMEKLLAMGGSGGMIAIDSQGNVALPFNSEGMYRGFGYVGDAPSVGIYTL >Mature_314_residues SKPVIAIHGGAGAITRSALSAEKEQEYIQALSGIVAAGQQILAQGGNALDAVTEAVRLLEECPLFNAGKGSVFTHQGTHE LDACVMDGRTCDAGAVAGVSRIRNPILAARAVLENSQHVLFAGEGAEKFAAAHGLEMVTPDFFFTQQRFDQLHRAQAEQG RVLLDHDGAEPIDPDRKFGTVGAVALDALGNLAAATSTGGMTNKQAGRVGDTPIIGAGCYANNATVAVSSTGTGEIFMRG VSAYDVSALMEYAGLSLQQASDRVVMEKLLAMGGSGGMIAIDSQGNVALPFNSEGMYRGFGYVGDAPSVGIYTL
Specific function: May be involved in glutathione, and possibly other peptide, transport, although these results could also be due to polar effects of disruption [H]
COG id: COG1446
COG function: function code E; Asparaginase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ntn-hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI145275202, Length=295, Percent_Identity=38.3050847457627, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI145275200, Length=295, Percent_Identity=38.3050847457627, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI98991769, Length=322, Percent_Identity=30.1242236024845, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI285002251, Length=255, Percent_Identity=34.9019607843137, Blast_Score=102, Evalue=5e-22, Organism=Homo sapiens, GI285002253, Length=255, Percent_Identity=32.9411764705882, Blast_Score=87, Evalue=2e-17, Organism=Escherichia coli, GI1787050, Length=313, Percent_Identity=67.4121405750799, Blast_Score=427, Evalue=1e-121, Organism=Caenorhabditis elegans, GI32564649, Length=320, Percent_Identity=24.0625, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI18921183, Length=321, Percent_Identity=38.006230529595, Blast_Score=182, Evalue=2e-46, Organism=Drosophila melanogaster, GI21357893, Length=269, Percent_Identity=33.457249070632, Blast_Score=123, Evalue=2e-28, Organism=Drosophila melanogaster, GI221330102, Length=252, Percent_Identity=33.3333333333333, Blast_Score=104, Evalue=9e-23, Organism=Drosophila melanogaster, GI24652135, Length=252, Percent_Identity=33.3333333333333, Blast_Score=103, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000246 [H]
Pfam domain/function: PF01112 Asparaginase_2 [H]
EC number: =3.4.19.5 [H]
Molecular weight: Translated: 32567; Mature: 32436
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPVIAIHGGAGAITRSALSAEKEQEYIQALSGIVAAGQQILAQGGNALDAVTEAVRLL CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH EECPLFNAGKGSVFTHQGTHELDACVMDGRTCDAGAVAGVSRIRNPILAARAVLENSQHV HHCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE LFAGEGAEKFAAAHGLEMVTPDFFFTQQRFDQLHRAQAEQGRVLLDHDGAEPIDPDRKFG EEECCCHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCC TVGAVALDALGNLAAATSTGGMTNKQAGRVGDTPIIGAGCYANNATVAVSSTGTGEIFMR HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCEECCCCEEEEECCCCCEEEEE GVSAYDVSALMEYAGLSLQQASDRVVMEKLLAMGGSGGMIAIDSQGNVALPFNSEGMYRG CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCCCC FGYVGDAPSVGIYTL CCCCCCCCCCCCEEC >Mature Secondary Structure SKPVIAIHGGAGAITRSALSAEKEQEYIQALSGIVAAGQQILAQGGNALDAVTEAVRLL CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH EECPLFNAGKGSVFTHQGTHELDACVMDGRTCDAGAVAGVSRIRNPILAARAVLENSQHV HHCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE LFAGEGAEKFAAAHGLEMVTPDFFFTQQRFDQLHRAQAEQGRVLLDHDGAEPIDPDRKFG EEECCCHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCC TVGAVALDALGNLAAATSTGGMTNKQAGRVGDTPIIGAGCYANNATVAVSSTGTGEIFMR HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCEECCCCEEEEECCCCCEEEEE GVSAYDVSALMEYAGLSLQQASDRVVMEKLLAMGGSGGMIAIDSQGNVALPFNSEGMYRG CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCCCC FGYVGDAPSVGIYTL CCCCCCCCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 3045084; 7984428 [H]