| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yebQ [C]
Identifier: 157369696
GI number: 157369696
Start: 1585401
End: 1586855
Strand: Direct
Name: yebQ [C]
Synonym: Spro_1453
Alternate gene names: 157369696
Gene position: 1585401-1586855 (Clockwise)
Preceding gene: 157369692
Following gene: 157369697
Centisome position: 29.1
GC content: 61.72
Gene sequence:
>1455_bases GTGATAACCAACGATGATAGCCGCTGGGCCGATCTATTTTCCGGCAAAAATGGTGCCAGTGCGATCGCGCTCTCACTCGG CGTAGCGCTGCATGCAATCAATATTCTGGTCGCTACCACCATTCTGCCCTCGGTGGTGCAGGATATCGGCGGGCTGAGTC TGTATGCCTGGAATACGACGCTGTTTGTGGTGGCGTCGATTCTGGGTTCGGCATTATCGGCTCGTTTACTCAGCGGTTAC GGGGCTCGCAGTGCCTACGTGGTGGCGTCACTGTTCTTTATTGCCGGAGCGATGCTGTGCGCGCTGGCGCCGTCAATGCC GGTGATGCTGCTCGGCCGAACCGTGCAGGGCTTCGGCGGCGGGCTGATTTTCGCGCTTTCGTACGCCATGATCAATCTGG TATTTGAGCAAAAACTATGGCCGCGGGCGATGGCGCTGATCTCGGCAATGTGGGGCATCGCGACCCTGGTAGGGCCGGCG GTGGGCGGCATTTTTGCCGAACTGAATGCCTGGCGCTGGGCCTTTGGCATCCTGTTGCCGGTGATGGTGCTGTACGCCGG GTTTACCTTCCTGATCCTGCCAAAAGGCAAACCGCAGCAACAGGCGGCACCGCTGCCGCTGGCTCAGCTGCTGCTGTTGG CGACGGCGGTAATGGTGGTGTCCGCCGGTAGCCTGGCGGACAGCGCGTGGGTCAATCTTGGCGGCATTGCGTTGGCCGTG CTGATGATGGCCTGGCTGATACAGCGTGAAGCGCACTCCCGCGCCCGATTGCTGCCGAAGGGGGCTTTGCGCCGCGGTTC GCCGCTGGCCTCGTTGTATATCACCGTCTCTCTGCTGGTGGTGGGCATGACCAGTGAAATCTTCGTGCCTTATTTCCTGC AAACCCTGCACGGCCAGTCCCCGCTGATTTCCGGTTATATCGCGGCCACTATGGCTGCGGGGTGGACGTTATCGGAAATC CTCAGTTCCGGCTGGCGCAGTGCGGGCATCCGCCGGGCCATTGTCAGCGGGCCGATGTTGGTGTTGGTGGGGCTACTGGC ATTGGGCCTGCTGATGCCGATACCTTCTGGCGGCCATTGGGCAGGGCTGACGCCGATTGTGATTGCGCTGACGCTGGTGG GCTTTGGTATTGGTTTCGGCTGGCCGCATCTGTTGACGCGTATTCTGCAGGTTTCGCCTGAGGCCGATAAGGATATTGCC GGGGCGTCGATCACCACGGTGCAACTGTTTGCGACCGCCTTTGGGGCTGCGTTGGCCGGGATGATTGCCAACCTGGCCGG GTTAAATGTGCCGGGTGGTGCGCAGGGCGCAGCCTCCGCTGCTCGCTGGCTGTTCCTGCTGTTTGCATTGGCGCCGCTGC TGGCGGTGTTCAGTGCCTGGCGCTGCGCGGCGATCGCACCGCCGGTTGCCGACAGCGACAAGCAGGTACCAGAGTCGTCG GCTCTGCCGTCATAA
Upstream 100 bases:
>100_bases CTCCGCCTCGCCCTACTCTTATTCCAAGATAATTCTTGTTAAATTTAACGCAATATCACCCTTAACTCAATGCCATTCCT CTGAAAACAGGACGACAACT
Downstream 100 bases:
>100_bases CGGCGAAAGACTTTTCGCCAAGTTGTAGTGCCAGTTAAAAATCTGGTTGACGAATCCCGTATTTGAGATTATTTCTCTTA TATGGGATTTTTTGTATCAG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MITNDDSRWADLFSGKNGASAIALSLGVALHAINILVATTILPSVVQDIGGLSLYAWNTTLFVVASILGSALSARLLSGY GARSAYVVASLFFIAGAMLCALAPSMPVMLLGRTVQGFGGGLIFALSYAMINLVFEQKLWPRAMALISAMWGIATLVGPA VGGIFAELNAWRWAFGILLPVMVLYAGFTFLILPKGKPQQQAAPLPLAQLLLLATAVMVVSAGSLADSAWVNLGGIALAV LMMAWLIQREAHSRARLLPKGALRRGSPLASLYITVSLLVVGMTSEIFVPYFLQTLHGQSPLISGYIAATMAAGWTLSEI LSSGWRSAGIRRAIVSGPMLVLVGLLALGLLMPIPSGGHWAGLTPIVIALTLVGFGIGFGWPHLLTRILQVSPEADKDIA GASITTVQLFATAFGAALAGMIANLAGLNVPGGAQGAASAARWLFLLFALAPLLAVFSAWRCAAIAPPVADSDKQVPESS ALPS
Sequences:
>Translated_484_residues MITNDDSRWADLFSGKNGASAIALSLGVALHAINILVATTILPSVVQDIGGLSLYAWNTTLFVVASILGSALSARLLSGY GARSAYVVASLFFIAGAMLCALAPSMPVMLLGRTVQGFGGGLIFALSYAMINLVFEQKLWPRAMALISAMWGIATLVGPA VGGIFAELNAWRWAFGILLPVMVLYAGFTFLILPKGKPQQQAAPLPLAQLLLLATAVMVVSAGSLADSAWVNLGGIALAV LMMAWLIQREAHSRARLLPKGALRRGSPLASLYITVSLLVVGMTSEIFVPYFLQTLHGQSPLISGYIAATMAAGWTLSEI LSSGWRSAGIRRAIVSGPMLVLVGLLALGLLMPIPSGGHWAGLTPIVIALTLVGFGIGFGWPHLLTRILQVSPEADKDIA GASITTVQLFATAFGAALAGMIANLAGLNVPGGAQGAASAARWLFLLFALAPLLAVFSAWRCAAIAPPVADSDKQVPESS ALPS >Mature_484_residues MITNDDSRWADLFSGKNGASAIALSLGVALHAINILVATTILPSVVQDIGGLSLYAWNTTLFVVASILGSALSARLLSGY GARSAYVVASLFFIAGAMLCALAPSMPVMLLGRTVQGFGGGLIFALSYAMINLVFEQKLWPRAMALISAMWGIATLVGPA VGGIFAELNAWRWAFGILLPVMVLYAGFTFLILPKGKPQQQAAPLPLAQLLLLATAVMVVSAGSLADSAWVNLGGIALAV LMMAWLIQREAHSRARLLPKGALRRGSPLASLYITVSLLVVGMTSEIFVPYFLQTLHGQSPLISGYIAATMAAGWTLSEI LSSGWRSAGIRRAIVSGPMLVLVGLLALGLLMPIPSGGHWAGLTPIVIALTLVGFGIGFGWPHLLTRILQVSPEADKDIA GASITTVQLFATAFGAALAGMIANLAGLNVPGGAQGAASAARWLFLLFALAPLLAVFSAWRCAAIAPPVADSDKQVPESS ALPS
Specific function: Could be involved in fluoroquinolones efflux [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=422, Percent_Identity=25.3554502369668, Blast_Score=92, Evalue=6e-20, Organism=Saccharomyces cerevisiae, GI6322958, Length=159, Percent_Identity=30.8176100628931, Blast_Score=80, Evalue=8e-16, Organism=Saccharomyces cerevisiae, GI6321663, Length=148, Percent_Identity=29.7297297297297, Blast_Score=73, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6325455, Length=175, Percent_Identity=27.4285714285714, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 50307; Mature: 50307
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITNDDSRWADLFSGKNGASAIALSLGVALHAINILVATTILPSVVQDIGGLSLYAWNTT CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHH LFVVASILGSALSARLLSGYGARSAYVVASLFFIAGAMLCALAPSMPVMLLGRTVQGFGG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHCCC GLIFALSYAMINLVFEQKLWPRAMALISAMWGIATLVGPAVGGIFAELNAWRWAFGILLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMVLYAGFTFLILPKGKPQQQAAPLPLAQLLLLATAVMVVSAGSLADSAWVNLGGIALAV HHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LMMAWLIQREAHSRARLLPKGALRRGSPLASLYITVSLLVVGMTSEIFVPYFLQTLHGQS HHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PLISGYIAATMAAGWTLSEILSSGWRSAGIRRAIVSGPMLVLVGLLALGLLMPIPSGGHW CHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC AGLTPIVIALTLVGFGIGFGWPHLLTRILQVSPEADKDIAGASITTVQLFATAFGAALAG CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH MIANLAGLNVPGGAQGAASAARWLFLLFALAPLLAVFSAWRCAAIAPPVADSDKQVPESS HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC ALPS CCCC >Mature Secondary Structure MITNDDSRWADLFSGKNGASAIALSLGVALHAINILVATTILPSVVQDIGGLSLYAWNTT CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHH LFVVASILGSALSARLLSGYGARSAYVVASLFFIAGAMLCALAPSMPVMLLGRTVQGFGG HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHCCC GLIFALSYAMINLVFEQKLWPRAMALISAMWGIATLVGPAVGGIFAELNAWRWAFGILLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMVLYAGFTFLILPKGKPQQQAAPLPLAQLLLLATAVMVVSAGSLADSAWVNLGGIALAV HHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LMMAWLIQREAHSRARLLPKGALRRGSPLASLYITVSLLVVGMTSEIFVPYFLQTLHGQS HHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PLISGYIAATMAAGWTLSEILSSGWRSAGIRRAIVSGPMLVLVGLLALGLLMPIPSGGHW CHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC AGLTPIVIALTLVGFGIGFGWPHLLTRILQVSPEADKDIAGASITTVQLFATAFGAALAG CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH MIANLAGLNVPGGAQGAASAARWLFLLFALAPLLAVFSAWRCAAIAPPVADSDKQVPESS HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC ALPS CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]