| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yifN [H]
Identifier: 157369601
GI number: 157369601
Start: 1488418
End: 1488870
Strand: Reverse
Name: yifN [H]
Synonym: Spro_1358
Alternate gene names: 157369601
Gene position: 1488870-1488418 (Counterclockwise)
Preceding gene: 157369602
Following gene: 157369600
Centisome position: 27.32
GC content: 47.24
Gene sequence:
>453_bases ATGCCCATCAATTTTGCCCCTAAGGTCGGGGAAATACTCGAATGCAACTATGGAAATTATCCTGCACCTATTGTCCCCAC GCATCTGCCTCATTTTTATAATGGCCGTATTCCACCAGCAATGGTGAAGAATCGACTTATCGTCGTACTCAATGGCAAAA TCAATGGTAACGCCTGTATCGTTGTACCTCTGTCGACCACCAAAGATATAAACAAACTTAATCTGGGTATGCATATTGAG ATCGCCGATGCAGTCATTGAAGATATGCGGTTCTTTCACCCACAAACGCGTTGGGCCAAGGGCGATTTGGTGCAACAGGT GAGCCGCCAACGCCTGAGCAGGCCGCGTAAACAACGCGGATTTCTCGTTCAATGTTTACACCGTGACCTGGTTGCCGAGA TACAACGAGCGGTAATCAAATCAATTAATGCGCGAACCCTGCTGCCGATATAA
Upstream 100 bases:
>100_bases TCCCACAGACTCCTACCAATACCTTTCTCCGGCCTGGCAACAGACTCATTATTACCATTCAGTTCGGTCAGATAGTTTTT GCGTAACAAGGAGAGTTTAC
Downstream 100 bases:
>100_bases CACCCAATGTGTTGACAAAACAAACAAATCGGGCAACACTGCTGCCGTAGCCGAAAAAGGCCCTATGCTATACCTTCCCT TTAAGGGATCCGCAAAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MPINFAPKVGEILECNYGNYPAPIVPTHLPHFYNGRIPPAMVKNRLIVVLNGKINGNACIVVPLSTTKDINKLNLGMHIE IADAVIEDMRFFHPQTRWAKGDLVQQVSRQRLSRPRKQRGFLVQCLHRDLVAEIQRAVIKSINARTLLPI
Sequences:
>Translated_150_residues MPINFAPKVGEILECNYGNYPAPIVPTHLPHFYNGRIPPAMVKNRLIVVLNGKINGNACIVVPLSTTKDINKLNLGMHIE IADAVIEDMRFFHPQTRWAKGDLVQQVSRQRLSRPRKQRGFLVQCLHRDLVAEIQRAVIKSINARTLLPI >Mature_149_residues PINFAPKVGEILECNYGNYPAPIVPTHLPHFYNGRIPPAMVKNRLIVVLNGKINGNACIVVPLSTTKDINKLNLGMHIEI ADAVIEDMRFFHPQTRWAKGDLVQQVSRQRLSRPRKQRGFLVQCLHRDLVAEIQRAVIKSINARTLLPI
Specific function: Unknown
COG id: COG3692
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003477 [H]
Pfam domain/function: PF02452 PemK [H]
EC number: NA
Molecular weight: Translated: 16979; Mature: 16848
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPINFAPKVGEILECNYGNYPAPIVPTHLPHFYNGRIPPAMVKNRLIVVLNGKINGNACI CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEECCCCCCEEE VVPLSTTKDINKLNLGMHIEIADAVIEDMRFFHPQTRWAKGDLVQQVSRQRLSRPRKQRG EEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHH FLVQCLHRDLVAEIQRAVIKSINARTLLPI HHHHHHHHHHHHHHHHHHHHHCCCEEECCC >Mature Secondary Structure PINFAPKVGEILECNYGNYPAPIVPTHLPHFYNGRIPPAMVKNRLIVVLNGKINGNACI CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEECCCCCCEEE VVPLSTTKDINKLNLGMHIEIADAVIEDMRFFHPQTRWAKGDLVQQVSRQRLSRPRKQRG EEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHH FLVQCLHRDLVAEIQRAVIKSINARTLLPI HHHHHHHHHHHHHHHHHHHHHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1379743; 9278503 [H]