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The map label for this gene is soxR [C]

Identifier: 157369600

GI number: 157369600

Start: 1487170

End: 1488198

Strand: Reverse

Name: soxR [C]

Synonym: Spro_1357

Alternate gene names: 157369600

Gene position: 1488198-1487170 (Counterclockwise)

Preceding gene: 157369601

Following gene: 157369599

Centisome position: 27.31

GC content: 57.63

Gene sequence:

>1029_bases
ATGTTATTGAAAGTTGGCGAACTGGCCCGCCGTTCCGGCATCACCGTCAGGACGCTGCATTATTACGACAGCATTGGTTT
GCTGGTTCCTTCTGCGCGTTCCGATGCCGGGTATCGCTTATATAATCGGGCTGATATTAGCCGCTTGCACCATATTCAGG
CGCTGCGCCGAATGGGGATCCCGCTGGCGGAAGTCGGGGCAATTCTGGCACGTTCGGGGATGACGCTAACGACGGTGATT
GAGCAGCAAATTGCCATGCTGGAGCAGCAACTGGCCCAGACAGCCGCACTGCGCGATCGTTTACAACAGATGCATGCACA
ACTCACCGCCGGAGATGAGCCGGAACTGAACGACTGGCTGACGACATTGGAGTTAATGACCATGTACGACAAATATTTTA
CCGCAGACGAACTGGCGCAATTGCCTTTCTATCAGGCCGATCCCATGCGTAATCAGCAATGGGGCGATCTGGTCGCTAGC
ATGCGCCAGTTGATCGACAGCGGCGTCACGCCGCAAGCATTGGAGGCGCAGACTCTGGCACGGCGCTGGATGCAGATGCT
GGAACGCGATACCGCTGGCAACCCGGCGTTTCTCACCCGGCTTAACGCCATGCATGCCGACGAACCCTCCATGCGTGAAC
AAACCGGCATCACCCCGGCGATGACCGACTACGTGACCCGGGCCTTTGCCGAAACCAAGTTATCAATTTATCAAAAATAC
CTGTCGGAGGAGGAATACGCCCATGTGCGCCAACACTATTTTACCCGCTTGCAGGAATGGCCGGCGCTGATCGCCCGGTT
CCATCAGGCGCTGAATGACGGCGTACCGCCGGAGTCAGGGCAAGCGAAACAGCTGGCGGCGCAATGGCTTGAGCTGTTCC
AGTCCTATGCCGGTACCGATCCTGCAACCCAGATGAAAATTCGCCAGGCGATGGAACGGGAACCCACGCTGACCGAGGGC
ACCTGGCTGACCCCGCCACTGTTAAGCTATCTGCAGCAGGCGGTGGCGCATTTGATGCGCGGTGCATGA

Upstream 100 bases:

>100_bases
TGCCATTCAGAGCTTCCCCCCGAAAATATCCCCCCCCTATTGACCCTCACGCCACGTCAGGCTTTAGTATTCCTGCACGC
ACAAGGGAGGAGTACACCAC

Downstream 100 bases:

>100_bases
CAAACCCAGATGGCAAGACCATAGGTTTTTCTTATATTCAGCATAAGAAAGCCCAATTTACCTTGTCGGCGGGCGCGGCG
CATAATGTGCTTATCTTATG

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MLLKVGELARRSGITVRTLHYYDSIGLLVPSARSDAGYRLYNRADISRLHHIQALRRMGIPLAEVGAILARSGMTLTTVI
EQQIAMLEQQLAQTAALRDRLQQMHAQLTAGDEPELNDWLTTLELMTMYDKYFTADELAQLPFYQADPMRNQQWGDLVAS
MRQLIDSGVTPQALEAQTLARRWMQMLERDTAGNPAFLTRLNAMHADEPSMREQTGITPAMTDYVTRAFAETKLSIYQKY
LSEEEYAHVRQHYFTRLQEWPALIARFHQALNDGVPPESGQAKQLAAQWLELFQSYAGTDPATQMKIRQAMEREPTLTEG
TWLTPPLLSYLQQAVAHLMRGA

Sequences:

>Translated_342_residues
MLLKVGELARRSGITVRTLHYYDSIGLLVPSARSDAGYRLYNRADISRLHHIQALRRMGIPLAEVGAILARSGMTLTTVI
EQQIAMLEQQLAQTAALRDRLQQMHAQLTAGDEPELNDWLTTLELMTMYDKYFTADELAQLPFYQADPMRNQQWGDLVAS
MRQLIDSGVTPQALEAQTLARRWMQMLERDTAGNPAFLTRLNAMHADEPSMREQTGITPAMTDYVTRAFAETKLSIYQKY
LSEEEYAHVRQHYFTRLQEWPALIARFHQALNDGVPPESGQAKQLAAQWLELFQSYAGTDPATQMKIRQAMEREPTLTEG
TWLTPPLLSYLQQAVAHLMRGA
>Mature_342_residues
MLLKVGELARRSGITVRTLHYYDSIGLLVPSARSDAGYRLYNRADISRLHHIQALRRMGIPLAEVGAILARSGMTLTTVI
EQQIAMLEQQLAQTAALRDRLQQMHAQLTAGDEPELNDWLTTLELMTMYDKYFTADELAQLPFYQADPMRNQQWGDLVAS
MRQLIDSGVTPQALEAQTLARRWMQMLERDTAGNPAFLTRLNAMHADEPSMREQTGITPAMTDYVTRAFAETKLSIYQKY
LSEEEYAHVRQHYFTRLQEWPALIARFHQALNDGVPPESGQAKQLAAQWLELFQSYAGTDPATQMKIRQAMEREPTLTEG
TWLTPPLLSYLQQAVAHLMRGA

Specific function: Albicidin resistance protein binds to form a complex without antibiotic activity but without catalyzing any further chemical modifications to albicidin [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012925 [H]

Pfam domain/function: PF07739 TipAS [H]

EC number: NA

Molecular weight: Translated: 38883; Mature: 38883

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS00552 HTH_MERR_1 ; PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLKVGELARRSGITVRTLHYYDSIGLLVPSARSDAGYRLYNRADISRLHHIQALRRMGI
CCCCHHHHHHHCCCEEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PLAEVGAILARSGMTLTTVIEQQIAMLEQQLAQTAALRDRLQQMHAQLTAGDEPELNDWL
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
TTLELMTMYDKYFTADELAQLPFYQADPMRNQQWGDLVASMRQLIDSGVTPQALEAQTLA
HHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RRWMQMLERDTAGNPAFLTRLNAMHADEPSMREQTGITPAMTDYVTRAFAETKLSIYQKY
HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LSEEEYAHVRQHYFTRLQEWPALIARFHQALNDGVPPESGQAKQLAAQWLELFQSYAGTD
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC
PATQMKIRQAMEREPTLTEGTWLTPPLLSYLQQAVAHLMRGA
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLLKVGELARRSGITVRTLHYYDSIGLLVPSARSDAGYRLYNRADISRLHHIQALRRMGI
CCCCHHHHHHHCCCEEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PLAEVGAILARSGMTLTTVIEQQIAMLEQQLAQTAALRDRLQQMHAQLTAGDEPELNDWL
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
TTLELMTMYDKYFTADELAQLPFYQADPMRNQQWGDLVASMRQLIDSGVTPQALEAQTLA
HHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RRWMQMLERDTAGNPAFLTRLNAMHADEPSMREQTGITPAMTDYVTRAFAETKLSIYQKY
HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LSEEEYAHVRQHYFTRLQEWPALIARFHQALNDGVPPESGQAKQLAAQWLELFQSYAGTD
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC
PATQMKIRQAMEREPTLTEGTWLTPPLLSYLQQAVAHLMRGA
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2845223 [H]