| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is ybhG [C]
Identifier: 157369572
GI number: 157369572
Start: 1458998
End: 1459984
Strand: Reverse
Name: ybhG [C]
Synonym: Spro_1329
Alternate gene names: 157369572
Gene position: 1459984-1458998 (Counterclockwise)
Preceding gene: 157369573
Following gene: 157369571
Centisome position: 26.79
GC content: 60.18
Gene sequence:
>987_bases ATGAATAAAAAACGCAGTGCCTTTTTGGTGGCGGTTGTTGTGCTGATCGCCGCGGCCGTTTACGGGGTCTGGTATTACCA ACAGCATCAGGATAAACCGCTGACGCTGTACGGTAACGTGGATATTCGCACGGTGAATTTGGGCTTCCGCGTCGATGGCC GTCTGGCGTCGCTGACGGTGGATGAAGGCGATACCCTGCAACCGGGGCAATTACTCGGCAAACTGGACGACGCGCCCTAC ATCAACGCGCTACAGCAGGCGCAGGCTAACGTCGGCAGTGCTAAAGCCAAGTTGGCGCTGCTGATGGCCGGTTACCGCGC CGAAGAAATTGCCCAGGTACGTTCGGAAATGGCGCAGCGCCTGTCCGCCTTTAGCTATGCCGATAGCTTCCTGAAGCGTC AGCAGGGCCTGTGGGCGAAAAATGCCACCTCAGCCGACGCGCTGGAAGATGCCCGCACCTCACGCAATCAGGCGCAGGCC AACCTGCAGGCGTCGAAGGACAAGCTGGCGCAATACCTGAGCGGTAATCGTCCGCAAGAAATAGAAGAGGCCAAAGCCAA TCTGGCGCAAAGCGAGGCCGCACTGGCTCAGGCCCAGCTTAACCTGCACGACACCACTTTGGTTTCCCCGTCCGCCGGCA CGGTGCTGACGCGGGCGGTCGAGCCGGGCACCATGCTCAGCGCCGGTGGCACGGTGTTCACTTTGTCGCTGACCCGTCCG GTGTGGGTGCGTGCCTATGTGAATGAAACCAGTCTGAGTAAAGCGACACCCGGTACCGAACTGGAAATCTATACCGATGG CCGGCCAGACAAGCCGTATCACGGCAAAATCGGCTTTGTCTCGCCGACCGCTGAATTCACGCCGAAGAGCGTCGAAACCC CGGACCTGCGTACCGACCTGGTGTACCGCCTGCGGGTGATAGTGACCGATGCCGATGACGCGCTGCGCCAGGGGATGCCG GTCACCGTTCGCTTTGCCCAACCTTGA
Upstream 100 bases:
>100_bases TCCCCAGGCGCTTACTCAAGTAAGTAACTGGGGTGAGCGAGTGCAGGTAACAACGCTGCAACTTGAAAGATGACGGGTAT AAATTCAGGCAGGGAGAATT
Downstream 100 bases:
>100_bases GGGGGCGGTGATGGAACAGGTCATTGAGCTTGAAGCGTTGGAAAAGCGTTTCCCGTCACTGGCAAAACCGGCGGTCGCCA GCCTGACTACCCGGCTGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MNKKRSAFLVAVVVLIAAAVYGVWYYQQHQDKPLTLYGNVDIRTVNLGFRVDGRLASLTVDEGDTLQPGQLLGKLDDAPY INALQQAQANVGSAKAKLALLMAGYRAEEIAQVRSEMAQRLSAFSYADSFLKRQQGLWAKNATSADALEDARTSRNQAQA NLQASKDKLAQYLSGNRPQEIEEAKANLAQSEAALAQAQLNLHDTTLVSPSAGTVLTRAVEPGTMLSAGGTVFTLSLTRP VWVRAYVNETSLSKATPGTELEIYTDGRPDKPYHGKIGFVSPTAEFTPKSVETPDLRTDLVYRLRVIVTDADDALRQGMP VTVRFAQP
Sequences:
>Translated_328_residues MNKKRSAFLVAVVVLIAAAVYGVWYYQQHQDKPLTLYGNVDIRTVNLGFRVDGRLASLTVDEGDTLQPGQLLGKLDDAPY INALQQAQANVGSAKAKLALLMAGYRAEEIAQVRSEMAQRLSAFSYADSFLKRQQGLWAKNATSADALEDARTSRNQAQA NLQASKDKLAQYLSGNRPQEIEEAKANLAQSEAALAQAQLNLHDTTLVSPSAGTVLTRAVEPGTMLSAGGTVFTLSLTRP VWVRAYVNETSLSKATPGTELEIYTDGRPDKPYHGKIGFVSPTAEFTPKSVETPDLRTDLVYRLRVIVTDADDALRQGMP VTVRFAQP >Mature_328_residues MNKKRSAFLVAVVVLIAAAVYGVWYYQQHQDKPLTLYGNVDIRTVNLGFRVDGRLASLTVDEGDTLQPGQLLGKLDDAPY INALQQAQANVGSAKAKLALLMAGYRAEEIAQVRSEMAQRLSAFSYADSFLKRQQGLWAKNATSADALEDARTSRNQAQA NLQASKDKLAQYLSGNRPQEIEEAKANLAQSEAALAQAQLNLHDTTLVSPSAGTVLTRAVEPGTMLSAGGTVFTLSLTRP VWVRAYVNETSLSKATPGTELEIYTDGRPDKPYHGKIGFVSPTAEFTPKSVETPDLRTDLVYRLRVIVTDADDALRQGMP VTVRFAQP
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0194 family [H]
Homologues:
Organism=Escherichia coli, GI1787013, Length=303, Percent_Identity=66.6666666666667, Blast_Score=396, Evalue=1e-111, Organism=Escherichia coli, GI1789900, Length=319, Percent_Identity=26.6457680250784, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1790519, Length=246, Percent_Identity=27.2357723577236, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI87081796, Length=346, Percent_Identity=26.0115606936416, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI87081951, Length=328, Percent_Identity=21.6463414634146, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 - InterPro: IPR022936 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 35701; Mature: 35701
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKRSAFLVAVVVLIAAAVYGVWYYQQHQDKPLTLYGNVDIRTVNLGFRVDGRLASLTV CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECEEEEEEEEEEEECCEEEEEEE DEGDTLQPGQLLGKLDDAPYINALQQAQANVGSAKAKLALLMAGYRAEEIAQVRSEMAQR CCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH LSAFSYADSFLKRQQGLWAKNATSADALEDARTSRNQAQANLQASKDKLAQYLSGNRPQE HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH IEEAKANLAQSEAALAQAQLNLHDTTLVSPSAGTVLTRAVEPGTMLSAGGTVFTLSLTRP HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECCCCCEEECCCEEEEEEECCC VWVRAYVNETSLSKATPGTELEIYTDGRPDKPYHGKIGFVSPTAEFTPKSVETPDLRTDL EEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHH VYRLRVIVTDADDALRQGMPVTVRFAQP EEEEEEEEECCHHHHHCCCCEEEEECCC >Mature Secondary Structure MNKKRSAFLVAVVVLIAAAVYGVWYYQQHQDKPLTLYGNVDIRTVNLGFRVDGRLASLTV CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECEEEEEEEEEEEECCEEEEEEE DEGDTLQPGQLLGKLDDAPYINALQQAQANVGSAKAKLALLMAGYRAEEIAQVRSEMAQR CCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH LSAFSYADSFLKRQQGLWAKNATSADALEDARTSRNQAQANLQASKDKLAQYLSGNRPQE HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH IEEAKANLAQSEAALAQAQLNLHDTTLVSPSAGTVLTRAVEPGTMLSAGGTVFTLSLTRP HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECCCCCEEECCCEEEEEEECCC VWVRAYVNETSLSKATPGTELEIYTDGRPDKPYHGKIGFVSPTAEFTPKSVETPDLRTDL EEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHH VYRLRVIVTDADDALRQGMPVTVRFAQP EEEEEEEEECCHHHHHCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA